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The map label for this gene is 150398427

Identifier: 150398427

GI number: 150398427

Start: 3410229

End: 3410984

Strand: Direct

Name: 150398427

Synonym: Smed_3235

Alternate gene names: NA

Gene position: 3410229-3410984 (Clockwise)

Preceding gene: 150398426

Following gene: 150398428

Centisome position: 90.17

GC content: 63.36

Gene sequence:

>756_bases
ATGTTCTCATCTCTCAAGCGGCGCCGTGTCAGAGGACCGTCACTTGATGTCGTTCGTGACATCGAGGTCGCCGGCAAGGT
CCTTCCCCTGACCATTCGGGAAAATGCGCGCGCGACGCGGATGACGCTTCGCATCGAGCCCGGTGGCAGGGCGCTGAAGC
TCACCGTGCCGGAAGGTCTGCCGGAGCGTGAGGTCAGCGCCTTTCTCACCCGCCATCAGGGCTGGTTGATGACCAAGCTT
GCCCGCTTTTCCGGCGAGAGCGAGATCGAGGATGGCGGCAGCATCCTCATCCGGGGCATTGCTCATCGCATCGAGAGGAC
CGGCCGCCTGCGCGGTTTGACCGAGGCGGTCGTCATCGACGACGAGGCAGTGCTGAAAGTAGGCGGCGCCGAGGAGCACC
TGCGCCGGCGGATTGCCGATTACCTGAAGAAGGAGGCGCGCGGCGAGCTCGAGCGTCTCGTCGCCATTTATACCGGCAGG
TTGGGGCGCAAGGCGCGCTCCATCAGCCTGAAAGACACCCGAAGCCGCTGGGGGTCCTGTTCCGCCCAAGGCGATTTGAG
CTTCTCCTGGCGTATCGCCATGGCGCCACCGAAGGTGATCTCCTATCTGGCGGCGCACGAAGTCGCCCATCTTCAGGAGA
TGAATCACGGGCCGGGCTTCTGGGCGCTGTGCGAAGGCCTTTGCCCTGAAACGAAAGACGCCAAGCACTGGCTGAAGCGC
AACGGCACCATGCTGCATGCGATCGATTTCAGCTAG

Upstream 100 bases:

>100_bases
CCGCATGGCGCCATCCCGTCATGATCCGGCGTTTCATGTGAAACGCCGGATTGCCTATGTCTACCTGCCAACGTGCCCGC
GAATCGGTTAAAACGGCCCC

Downstream 100 bases:

>100_bases
GTGAGGGCATCCTTGTGCCGCCAGGCGGACGAGGAGGCGCCCGCATGGTTCGTCGAAAAACGCCGGGTGCCCGCCGCCGC
ATTCTTCCTAACAATAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MFSSLKRRRVRGPSLDVVRDIEVAGKVLPLTIRENARATRMTLRIEPGGRALKLTVPEGLPEREVSAFLTRHQGWLMTKL
ARFSGESEIEDGGSILIRGIAHRIERTGRLRGLTEAVVIDDEAVLKVGGAEEHLRRRIADYLKKEARGELERLVAIYTGR
LGRKARSISLKDTRSRWGSCSAQGDLSFSWRIAMAPPKVISYLAAHEVAHLQEMNHGPGFWALCEGLCPETKDAKHWLKR
NGTMLHAIDFS

Sequences:

>Translated_251_residues
MFSSLKRRRVRGPSLDVVRDIEVAGKVLPLTIRENARATRMTLRIEPGGRALKLTVPEGLPEREVSAFLTRHQGWLMTKL
ARFSGESEIEDGGSILIRGIAHRIERTGRLRGLTEAVVIDDEAVLKVGGAEEHLRRRIADYLKKEARGELERLVAIYTGR
LGRKARSISLKDTRSRWGSCSAQGDLSFSWRIAMAPPKVISYLAAHEVAHLQEMNHGPGFWALCEGLCPETKDAKHWLKR
NGTMLHAIDFS
>Mature_251_residues
MFSSLKRRRVRGPSLDVVRDIEVAGKVLPLTIRENARATRMTLRIEPGGRALKLTVPEGLPEREVSAFLTRHQGWLMTKL
ARFSGESEIEDGGSILIRGIAHRIERTGRLRGLTEAVVIDDEAVLKVGGAEEHLRRRIADYLKKEARGELERLVAIYTGR
LGRKARSISLKDTRSRWGSCSAQGDLSFSWRIAMAPPKVISYLAAHEVAHLQEMNHGPGFWALCEGLCPETKDAKHWLKR
NGTMLHAIDFS

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28138; Mature: 28138

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSLKRRRVRGPSLDVVRDIEVAGKVLPLTIRENARATRMTLRIEPGGRALKLTVPEGL
CCCCHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCC
PEREVSAFLTRHQGWLMTKLARFSGESEIEDGGSILIRGIAHRIERTGRLRGLTEAVVID
CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
DEAVLKVGGAEEHLRRRIADYLKKEARGELERLVAIYTGRLGRKARSISLKDTRSRWGSC
CHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCCC
SAQGDLSFSWRIAMAPPKVISYLAAHEVAHLQEMNHGPGFWALCEGLCPETKDAKHWLKR
CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHH
NGTMLHAIDFS
CCCEEEEEECC
>Mature Secondary Structure
MFSSLKRRRVRGPSLDVVRDIEVAGKVLPLTIRENARATRMTLRIEPGGRALKLTVPEGL
CCCCHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCC
PEREVSAFLTRHQGWLMTKLARFSGESEIEDGGSILIRGIAHRIERTGRLRGLTEAVVID
CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
DEAVLKVGGAEEHLRRRIADYLKKEARGELERLVAIYTGRLGRKARSISLKDTRSRWGSC
CHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCCC
SAQGDLSFSWRIAMAPPKVISYLAAHEVAHLQEMNHGPGFWALCEGLCPETKDAKHWLKR
CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHH
NGTMLHAIDFS
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA