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The map label for this gene is ydaL [C]

Identifier: 150398410

GI number: 150398410

Start: 3392065

End: 3392640

Strand: Direct

Name: ydaL [C]

Synonym: Smed_3218

Alternate gene names: 150398410

Gene position: 3392065-3392640 (Clockwise)

Preceding gene: 150398409

Following gene: 150398411

Centisome position: 89.69

GC content: 65.1

Gene sequence:

>576_bases
ATGGCTAGGGAAAAGAAACTCTCCGCCGAGGACCGGATTCTCTGGGGGAAGGTGGCGCGCTCGGCGCGCCCGATGCCCGG
GCGGCTGGATGATCTCGAGGAACTGCTCGGCGGGGCGGCGGAAATCAAGGCCGTGCCTGGTCCGGAGGCGGACTCCTCGA
GCGCCCCCGAGAAGATCGACAGAGGCTTTTCGATCAGCCGGGAGAAAATGGAACAGCGCCCGCATCATCCGCTGGAGCGG
CCGGTCAAACGCAAGCTCGCTAAGGGCAGGTTGACGCTGGAGGCCCGTATCGACCTTCACGGCATGATCCAGAGCGAGGC
GAACGGCCTGCTGCTGCAGTTCCTCCTCAGAGCGCGGGAGCGCGGTATGCGTCATGTCCTTGTCATAACCGGCAAGGGCA
CATCCCTTGGCAGCGACGGCGCCTTGAAGCGCGCGGTGCCGTTCTGGTTTTCGCTGCCGGAGTTCCGGCCGTTGATTTCG
TCCTACGAACCGGCAGCGCGCAATCATGGCGGCGAGGGGGCGTTGTATGTGCGGCTGGCGCGGGCGAAGGAAGCGCGTCA
TGACCCCATTCGGTGA

Upstream 100 bases:

>100_bases
GACGCGGCGGGGGATCTCGCCGGTTCCGTGCGCAACGAAGCAGACTTCTTCATTCTCGTGCCCCTTGCGGCCGCGGCCCG
ATATCGCCGGCAGTCCAGTC

Downstream 100 bases:

>100_bases
GGCCGTACGGGAGCTCCGGCGGCGCAAGGGCGTGACGCAGAAGGAGATGGCGGCGGCCATCGGGGTTTCGCCGGCCTACC
TCTCGGCTCTCGAACATGGC

Product: Smr protein/MutS2

Products: NA

Alternate protein names: Smr Domain-Containing Protein; DNA Repair Protein Smr/MutS Family; Smr Protein; Smr/MutS Family Protein; Smr/MutS Family DNA Repair Protein; Smr Family Protein; Smr Protein/Muts2-Like; DNA Repair Protein; Smr Protein/MutS2 Domain Protein; Smr Protein/MutS2 C-Terminal

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAREKKLSAEDRILWGKVARSARPMPGRLDDLEELLGGAAEIKAVPGPEADSSSAPEKIDRGFSISREKMEQRPHHPLER
PVKRKLAKGRLTLEARIDLHGMIQSEANGLLLQFLLRARERGMRHVLVITGKGTSLGSDGALKRAVPFWFSLPEFRPLIS
SYEPAARNHGGEGALYVRLARAKEARHDPIR

Sequences:

>Translated_191_residues
MAREKKLSAEDRILWGKVARSARPMPGRLDDLEELLGGAAEIKAVPGPEADSSSAPEKIDRGFSISREKMEQRPHHPLER
PVKRKLAKGRLTLEARIDLHGMIQSEANGLLLQFLLRARERGMRHVLVITGKGTSLGSDGALKRAVPFWFSLPEFRPLIS
SYEPAARNHGGEGALYVRLARAKEARHDPIR
>Mature_190_residues
AREKKLSAEDRILWGKVARSARPMPGRLDDLEELLGGAAEIKAVPGPEADSSSAPEKIDRGFSISREKMEQRPHHPLERP
VKRKLAKGRLTLEARIDLHGMIQSEANGLLLQFLLRARERGMRHVLVITGKGTSLGSDGALKRAVPFWFSLPEFRPLISS
YEPAARNHGGEGALYVRLARAKEARHDPIR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21266; Mature: 21135

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAREKKLSAEDRILWGKVARSARPMPGRLDDLEELLGGAAEIKAVPGPEADSSSAPEKID
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHEEEECCCCCCCCCCCCHHHH
RGFSISREKMEQRPHHPLERPVKRKLAKGRLTLEARIDLHGMIQSEANGLLLQFLLRARE
CCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHH
RGMRHVLVITGKGTSLGSDGALKRAVPFWFSLPEFRPLISSYEPAARNHGGEGALYVRLA
CCCEEEEEEEECCCCCCCCCCHHHHCHHHHCCHHHHHHHHCCCCHHHCCCCCCEEEEEEH
RAKEARHDPIR
HHHHCCCCCCC
>Mature Secondary Structure 
AREKKLSAEDRILWGKVARSARPMPGRLDDLEELLGGAAEIKAVPGPEADSSSAPEKID
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHEEEECCCCCCCCCCCCHHHH
RGFSISREKMEQRPHHPLERPVKRKLAKGRLTLEARIDLHGMIQSEANGLLLQFLLRARE
CCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHH
RGMRHVLVITGKGTSLGSDGALKRAVPFWFSLPEFRPLISSYEPAARNHGGEGALYVRLA
CCCEEEEEEEECCCCCCCCCCHHHHCHHHHCCHHHHHHHHCCCCHHHCCCCCCEEEEEEH
RAKEARHDPIR
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA