Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is mltA [H]
Identifier: 150398409
GI number: 150398409
Start: 3390954
End: 3392072
Strand: Direct
Name: mltA [H]
Synonym: Smed_3217
Alternate gene names: 150398409
Gene position: 3390954-3392072 (Clockwise)
Preceding gene: 150398408
Following gene: 150398410
Centisome position: 89.66
GC content: 62.73
Gene sequence:
>1119_bases ATGGCTTTTGATCTCGAGCCGGTCTCCTTTTCGGAGCTGCCAGGCTGGTTTGCGGACGACCCGGCGCCGGTGATCGCTTC ACTTCGCCGCTGTCACCGGCATGTAACGACGGTGAAGCCGTATAAGACCGGTTCGCTCGGGCTTTCGGTGGAGGACATGT TGCCGGCCTTCGAGGCGGCGGGTGGGGATTTCGCCAATGCGGCGGCCGCACGTGCTTTTTTCGAGGCCTGGTTCGTTCCG TTTCGTATCCGCCCGAAAGGGAAACGGGCGGGCTTCGTCACCGCCTTCTACGAGCCCGAGATCGAAGTCCGGGAAGAGCC GGATGCGAATTTCCGCTTTCCATTATACCGGCGCCCCTCCGACCTCGTCGATATAAACGACGCAAACCGGCCGGAGGGGA TGGACCCCTATTTCGCTTTCGGATGCCTTCGTGACGGCAGGATCGAAGAATATCCGGATCGCTGCGCCATCGAAGAGGGC TTTCTCGCCGGGCGCGGGCTGGAGATCGCCTATGCCCGCTCCAAGGTCGACGTCTTTTTCGTCCATGTGCAGGGGGCAGC CCGGCTGAACTATCCGGACGGGTCGCGTCGGCGCATCACCTATGCCGCAAAAACCGGGCATCGCTTCACCGCGATCGGCA AACTGTTGATCGAGCGTGGAGAGATCGACGCCGCCACCGTGTCGATGGCCAGTATTCGTGAATGGCTCGCGGCCCATCCG GACAGGACGGATGAGGTTCTTCGGCATAACCGGTCCTTCATCTTTTTCCGCGAGGCGCCGGTCGAGAAAGATGATCTCGG CCCCGTCGCTGCTGCCAAGGTGCCGCTCGAGCCGGGCCGGTCGCTTGCGGTGGACCGACTCATCCACACTTTCGGCGTTC CTTTTTACATCGCGAGCGAGACGCTGACCCATCTCGACGGAGGAAATTCCTTCGGCCGCCTGATGCTCGCGCTGGACACC GGCTCTGCCATTGTCGGCCCGGCCCGTGGCGATATTTTCACCGGTTCCGGCGACGCGGCGGGGGATCTCGCCGGTTCCGT GCGCAACGAAGCAGACTTCTTCATTCTCGTGCCCCTTGCGGCCGCGGCCCGATATCGCCGGCAGTCCAGTCATGGCTAG
Upstream 100 bases:
>100_bases TGAACGATCTGTGGACCTTCTCGCGTGACATCCGTTCACGCGACCCGAACTGGAAGCTGATCGCTACCGAATCTGAAAAC TGACCGGGAAGCGGGCGGCC
Downstream 100 bases:
>100_bases GGAAAAGAAACTCTCCGCCGAGGACCGGATTCTCTGGGGGAAGGTGGCGCGCTCGGCGCGCCCGATGCCCGGGCGGCTGG ATGATCTCGAGGAACTGCTC
Product: MltA domain-containing protein
Products: Muramic Acid Residue [C]
Alternate protein names: Murein hydrolase A [H]
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAFDLEPVSFSELPGWFADDPAPVIASLRRCHRHVTTVKPYKTGSLGLSVEDMLPAFEAAGGDFANAAAARAFFEAWFVP FRIRPKGKRAGFVTAFYEPEIEVREEPDANFRFPLYRRPSDLVDINDANRPEGMDPYFAFGCLRDGRIEEYPDRCAIEEG FLAGRGLEIAYARSKVDVFFVHVQGAARLNYPDGSRRRITYAAKTGHRFTAIGKLLIERGEIDAATVSMASIREWLAAHP DRTDEVLRHNRSFIFFREAPVEKDDLGPVAAAKVPLEPGRSLAVDRLIHTFGVPFYIASETLTHLDGGNSFGRLMLALDT GSAIVGPARGDIFTGSGDAAGDLAGSVRNEADFFILVPLAAAARYRRQSSHG
Sequences:
>Translated_372_residues MAFDLEPVSFSELPGWFADDPAPVIASLRRCHRHVTTVKPYKTGSLGLSVEDMLPAFEAAGGDFANAAAARAFFEAWFVP FRIRPKGKRAGFVTAFYEPEIEVREEPDANFRFPLYRRPSDLVDINDANRPEGMDPYFAFGCLRDGRIEEYPDRCAIEEG FLAGRGLEIAYARSKVDVFFVHVQGAARLNYPDGSRRRITYAAKTGHRFTAIGKLLIERGEIDAATVSMASIREWLAAHP DRTDEVLRHNRSFIFFREAPVEKDDLGPVAAAKVPLEPGRSLAVDRLIHTFGVPFYIASETLTHLDGGNSFGRLMLALDT GSAIVGPARGDIFTGSGDAAGDLAGSVRNEADFFILVPLAAAARYRRQSSHG >Mature_371_residues AFDLEPVSFSELPGWFADDPAPVIASLRRCHRHVTTVKPYKTGSLGLSVEDMLPAFEAAGGDFANAAAARAFFEAWFVPF RIRPKGKRAGFVTAFYEPEIEVREEPDANFRFPLYRRPSDLVDINDANRPEGMDPYFAFGCLRDGRIEEYPDRCAIEEGF LAGRGLEIAYARSKVDVFFVHVQGAARLNYPDGSRRRITYAAKTGHRFTAIGKLLIERGEIDAATVSMASIREWLAAHPD RTDEVLRHNRSFIFFREAPVEKDDLGPVAAAKVPLEPGRSLAVDRLIHTFGVPFYIASETLTHLDGGNSFGRLMLALDTG SAIVGPARGDIFTGSGDAAGDLAGSVRNEADFFILVPLAAAARYRRQSSHG
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Degrades murein glycan strands and insoluble, high-molecular weight murein sacculi [H]
COG id: COG2821
COG function: function code M; Membrane-bound lytic murein transglycosylase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789179, Length=273, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010611 - InterPro: IPR014733 - InterPro: IPR005300 [H]
Pfam domain/function: PF06725 3D; PF03562 MltA [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 40961; Mature: 40829
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDLEPVSFSELPGWFADDPAPVIASLRRCHRHVTTVKPYKTGSLGLSVEDMLPAFEAA CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC GGDFANAAAARAFFEAWFVPFRIRPKGKRAGFVTAFYEPEIEVREEPDANFRFPLYRRPS CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCEEECCCCCCCCCCCEECCCC DLVDINDANRPEGMDPYFAFGCLRDGRIEEYPDRCAIEEGFLAGRGLEIAYARSKVDVFF CEEECCCCCCCCCCCCHHEEEECCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCEEEEE VHVQGAARLNYPDGSRRRITYAAKTGHRFTAIGKLLIERGEIDAATVSMASIREWLAAHP EEEECCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC DRTDEVLRHNRSFIFFREAPVEKDDLGPVAAAKVPLEPGRSLAVDRLIHTFGVPFYIASE CCHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECC TLTHLDGGNSFGRLMLALDTGSAIVGPARGDIFTGSGDAAGDLAGSVRNEADFFILVPLA HHHHCCCCCCCCEEEEEEECCCEEECCCCCCEEECCCCCCHHHHHHCCCCCCEEEEEEHH AAARYRRQSSHG HHHHHHHHCCCC >Mature Secondary Structure AFDLEPVSFSELPGWFADDPAPVIASLRRCHRHVTTVKPYKTGSLGLSVEDMLPAFEAA CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC GGDFANAAAARAFFEAWFVPFRIRPKGKRAGFVTAFYEPEIEVREEPDANFRFPLYRRPS CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCEEECCCCCCCCCCCEECCCC DLVDINDANRPEGMDPYFAFGCLRDGRIEEYPDRCAIEEGFLAGRGLEIAYARSKVDVFF CEEECCCCCCCCCCCCHHEEEECCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCEEEEE VHVQGAARLNYPDGSRRRITYAAKTGHRFTAIGKLLIERGEIDAATVSMASIREWLAAHP EEEECCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC DRTDEVLRHNRSFIFFREAPVEKDDLGPVAAAKVPLEPGRSLAVDRLIHTFGVPFYIASE CCHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECC TLTHLDGGNSFGRLMLALDTGSAIVGPARGDIFTGSGDAAGDLAGSVRNEADFFILVPLA HHHHCCCCCCCCEEEEEEECCCEEECCCCCCEEECCCCCCHHHHHHCCCCCCEEEEEEHH AAARYRRQSSHG HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]