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The map label for this gene is gatC [H]

Identifier: 150396166

GI number: 150396166

Start: 1019598

End: 1019885

Strand: Direct

Name: gatC [H]

Synonym: Smed_0943

Alternate gene names: 150396166

Gene position: 1019598-1019885 (Clockwise)

Preceding gene: 150396165

Following gene: 150396167

Centisome position: 26.96

GC content: 59.03

Gene sequence:

>288_bases
ATGTCCGTAGACCTTGCCACCGTCAAGCGCGTCGCGCGCCTTGCCCGCATCGCCGTCAGCGACCAGGAAGCCGAGCGGAT
GACGAGCGAGATCAACGGTATATTGGGCTTCGTCGAGCAGCTTTCCGAAGTGAATGTCGACGGAGTCGAGCCGATGACAT
CGGTGATGCCTATGACGATGAAGAAGCGCGAGGACGTTGTCGCAGATGGCGACAAGGCGGCCGACATTGTCGCCAATGCA
CCCAATTCGGACCGCAATTTCTTCGTCGTCCCGAAGGTGGTCGAGTAA

Upstream 100 bases:

>100_bases
CGTAAACGGCACGCCGCTCCAGTCTCTGCGCTATTCCCCCGTTGCGTGCCCGGCGTCTCGCCTTTATAGCGGGGGAAACT
TTGCGATACCGGAGACCGCC

Downstream 100 bases:

>100_bases
CCGTCCGCCGCCCGCCCAGTCGTCCCGATTGCGAAAGTCCAAATACGCCATGACCGACCTTACGAGCCTCACGATCGCAG
AAGCCCGCGCGAAGCTTTCC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSVDLATVKRVARLARIAVSDQEAERMTSEINGILGFVEQLSEVNVDGVEPMTSVMPMTMKKREDVVADGDKAADIVANA
PNSDRNFFVVPKVVE

Sequences:

>Translated_95_residues
MSVDLATVKRVARLARIAVSDQEAERMTSEINGILGFVEQLSEVNVDGVEPMTSVMPMTMKKREDVVADGDKAADIVANA
PNSDRNFFVVPKVVE
>Mature_94_residues
SVDLATVKRVARLARIAVSDQEAERMTSEINGILGFVEQLSEVNVDGVEPMTSVMPMTMKKREDVVADGDKAADIVANAP
NSDRNFFVVPKVVE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 10351; Mature: 10220

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDLATVKRVARLARIAVSDQEAERMTSEINGILGFVEQLSEVNVDGVEPMTSVMPMTM
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KKREDVVADGDKAADIVANAPNSDRNFFVVPKVVE
HHHHCCCCCCCCCHHHEECCCCCCCCEEECCEECC
>Mature Secondary Structure 
SVDLATVKRVARLARIAVSDQEAERMTSEINGILGFVEQLSEVNVDGVEPMTSVMPMTM
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KKREDVVADGDKAADIVANAPNSDRNFFVVPKVVE
HHHHCCCCCCCCCHHHEECCCCCCCCEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]