Click here to switch to the map view.

The map label for this gene is 150396130

Identifier: 150396130

GI number: 150396130

Start: 979229

End: 979498

Strand: Direct

Name: 150396130

Synonym: Smed_0907

Alternate gene names: NA

Gene position: 979229-979498 (Clockwise)

Preceding gene: 150396129

Following gene: 150396131

Centisome position: 25.89

GC content: 57.41

Gene sequence:

>270_bases
ATGTCCTTCTTTTCGACCTTCGCCATCTATTTCATCATCTGGTGGATCACGCTTTTTGTCGTGCTGCCGCTGGGTGTGCG
TACGCAGGCCGAGGAGAACGAAGTCGTTCCTGGTACCGTGGAGAGTGCGCCTGCACGTTTCAGGGCTCTGAGGGTCGTGC
TGCTCACGACGGTCATCGCCGCGGTGGTCCATTTCGGCTGGTACGTCCTGTCGGTGAAACTCGGCTACGACATCGATGCC
ATTCCGCGCTTTGCGCCGAAGTTCTATTGA

Upstream 100 bases:

>100_bases
AGCCGCCCAGCGTTATAAGGCATCCGAACGCTCTGCCTCTTTGAAGCTGCGGGCGGAAAACCGCATACAGTTTTTCGTTA
TCCCGCTCTTGAGATTTTCG

Downstream 100 bases:

>100_bases
TGACATTAAGCGAGCGGCGCATGTCTCGGCTCGAGAGCTGCTGCCTCAACTGCCGCGAAGAGGCGACCGCACCGACGCGG
CGTCCCGCGACCGACGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSFFSTFAIYFIIWWITLFVVLPLGVRTQAEENEVVPGTVESAPARFRALRVVLLTTVIAAVVHFGWYVLSVKLGYDIDA
IPRFAPKFY

Sequences:

>Translated_89_residues
MSFFSTFAIYFIIWWITLFVVLPLGVRTQAEENEVVPGTVESAPARFRALRVVLLTTVIAAVVHFGWYVLSVKLGYDIDA
IPRFAPKFY
>Mature_88_residues
SFFSTFAIYFIIWWITLFVVLPLGVRTQAEENEVVPGTVESAPARFRALRVVLLTTVIAAVVHFGWYVLSVKLGYDIDAI
PRFAPKFY

Specific function: Unknown

COG id: COG5454

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10143; Mature: 10012

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFSTFAIYFIIWWITLFVVLPLGVRTQAEENEVVPGTVESAPARFRALRVVLLTTVIA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVVHFGWYVLSVKLGYDIDAIPRFAPKFY
HHHHHHHHHHHEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFFSTFAIYFIIWWITLFVVLPLGVRTQAEENEVVPGTVESAPARFRALRVVLLTTVIA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVVHFGWYVLSVKLGYDIDAIPRFAPKFY
HHHHHHHHHHHEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA