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The map label for this gene is nuoJ [H]

Identifier: 150396122

GI number: 150396122

Start: 970197

End: 970865

Strand: Direct

Name: nuoJ [H]

Synonym: Smed_0899

Alternate gene names: 150396122

Gene position: 970197-970865 (Clockwise)

Preceding gene: 150396121

Following gene: 150396123

Centisome position: 25.65

GC content: 60.39

Gene sequence:

>669_bases
ATGGAGTGCGGGCATGCGTGCCTCCACGCCAGCAAGACGAAAAAGGCACCGATCATGGGTCTGCAGGCTCTTTTTTTCTA
TCTCTTTGCCTTCATCGCGGTAGCGTCGGCATTTATGGTCATCGCGGCCAAGAACCCCGTCTATTCGGTTCTGTTCCTGA
TCCTGACCTTCTTCAACGCGGCTGGACTGTTCCTGCTGACAGGCGCCGAGTTCCTGGCGATGATCCTGCTGGTGGTCTAT
GTCGGGGCCGTCGCGGTTCTCTTCCTCTTCGTCGTCATGATGCTCGATATCGACTTCGCCGAACTGCGTGCCGGCGTTCT
CGAATATGCGCCGATCGGCGCGCTGATCGGGATGATCCTCGCTGCCGAGCTGATCGTCGTCGCCGGCGGCTGGGCCTTCT
CGCCGGAGATAGCTAAAGGTATAGCAATGCCGATACCGGCGCCCAGCGAGCGCACCAATACCGCAGCGCTCGGCGATGTC
CTCTATACCCACTACGTCTATTTCTTCCAGATCGCAGGGCTCGTGCTGCTCGTCGCCATGATCGGCGCCATCGTGCTCAC
CCTGCGTCACCGTCAGAACATCAAGCGTCAGAGCATTCCGCAGCAGGTTGCCCGCACCCCCGAGACCGCCGTCGAGGTGG
TCACGGTCAAGCCGGGGCAGGGCATCTAA

Upstream 100 bases:

>100_bases
CTGAGGCCAGTCGCTGAACGAAGCATTGCGCCGCTTGATCGAGACGGTGCATGCAAAACGGGTTTGGGCATCAGCCGGAC
AGGTGGTCCGGCTTTGCCTC

Downstream 100 bases:

>100_bases
TCGGGACGCGAGGTCGAGGGACTACACATATGGAAATCGGAATCTCCCATTATCTGACCGTCAGCGCCATCCTGTTCACG
CTCGGCGTCTTCGGCATCTT

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MECGHACLHASKTKKAPIMGLQALFFYLFAFIAVASAFMVIAAKNPVYSVLFLILTFFNAAGLFLLTGAEFLAMILLVVY
VGAVAVLFLFVVMMLDIDFAELRAGVLEYAPIGALIGMILAAELIVVAGGWAFSPEIAKGIAMPIPAPSERTNTAALGDV
LYTHYVYFFQIAGLVLLVAMIGAIVLTLRHRQNIKRQSIPQQVARTPETAVEVVTVKPGQGI

Sequences:

>Translated_222_residues
MECGHACLHASKTKKAPIMGLQALFFYLFAFIAVASAFMVIAAKNPVYSVLFLILTFFNAAGLFLLTGAEFLAMILLVVY
VGAVAVLFLFVVMMLDIDFAELRAGVLEYAPIGALIGMILAAELIVVAGGWAFSPEIAKGIAMPIPAPSERTNTAALGDV
LYTHYVYFFQIAGLVLLVAMIGAIVLTLRHRQNIKRQSIPQQVARTPETAVEVVTVKPGQGI
>Mature_222_residues
MECGHACLHASKTKKAPIMGLQALFFYLFAFIAVASAFMVIAAKNPVYSVLFLILTFFNAAGLFLLTGAEFLAMILLVVY
VGAVAVLFLFVVMMLDIDFAELRAGVLEYAPIGALIGMILAAELIVVAGGWAFSPEIAKGIAMPIPAPSERTNTAALGDV
LYTHYVYFFQIAGLVLLVAMIGAIVLTLRHRQNIKRQSIPQQVARTPETAVEVVTVKPGQGI

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=184, Percent_Identity=29.8913043478261, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 23864; Mature: 23864

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECGHACLHASKTKKAPIMGLQALFFYLFAFIAVASAFMVIAAKNPVYSVLFLILTFFNA
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AGLFLLTGAEFLAMILLVVYVGAVAVLFLFVVMMLDIDFAELRAGVLEYAPIGALIGMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AAELIVVAGGWAFSPEIAKGIAMPIPAPSERTNTAALGDVLYTHYVYFFQIAGLVLLVAM
HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAIVLTLRHRQNIKRQSIPQQVARTPETAVEVVTVKPGQGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCC
>Mature Secondary Structure
MECGHACLHASKTKKAPIMGLQALFFYLFAFIAVASAFMVIAAKNPVYSVLFLILTFFNA
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AGLFLLTGAEFLAMILLVVYVGAVAVLFLFVVMMLDIDFAELRAGVLEYAPIGALIGMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AAELIVVAGGWAFSPEIAKGIAMPIPAPSERTNTAALGDVLYTHYVYFFQIAGLVLLVAM
HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAIVLTLRHRQNIKRQSIPQQVARTPETAVEVVTVKPGQGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]