| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is hppA [H]
Identifier: 150396048
GI number: 150396048
Start: 886442
End: 888577
Strand: Direct
Name: hppA [H]
Synonym: Smed_0824
Alternate gene names: 150396048
Gene position: 886442-888577 (Clockwise)
Preceding gene: 150396047
Following gene: 150396050
Centisome position: 23.44
GC content: 62.36
Gene sequence:
>2136_bases ATGACCATACTATTGGGCGTGATCGCATGCGGGTTGCTTTCGGTGGTCTATGCCATCTGGGCGACACGGTCGGTGCTTGC CGCCGACCAGGGGAATGCCCGCATGCAGGAAATCGCAGGCTTTATCAGAGAGGGGGCGCAAGCCTACCTCGCGCGTCAGT ACACAACCATCGCCTTCGTCGGTGTCGTCGTTTTCATAGCCGCATGGGTTCTGCTCTCGGGTGCGGCCGCCATCGGCTTC CTGATCGGTGCGGTGCTCTCGGGTGCCGCGGGCTTCATCGGCATGCATGTTTCGGTCAGAGCCAACGTCCGCACGGCCCA GGCCGCTTCGGTCAGTCTTGCCTCCGGTCTGGACATCGCTTTCAAATCCGGCGCCATCACCGGCATGCTGGTTGCGGGCC TCGCTCTCCTGGGCGTCTCGGTCTATTACCTCATCCTCACGGCAGGGCTTGGGCATGAGCCGGCCTCGCGCGAAGTCATC GATGCGCTTGTCGCGCTGGGTTTCGGGGCGTCGTTGATCTCGATCTTCGCCCGTCTGGGCGGCGGCATCTTCACGAAAGG CGCCGATGTCGGCGGCGACCTCGTCGGCAAGGTCGAAGCAGGGATCCCCGAGGATGATCCGCGCAACCCGGCGACGATCG CCGACAATGTCGGCGACAATGTCGGCGACTGCGCAGGCATGGCAGCGGACCTCTTCGAGACCTATGCGGTCTCTGTCGTG GCGACCATGGTACTTGCGTCGATCTTCTTCGCAGGTGCCCCTGTGCTGGCAACCGTCATGACCTATCCGCTGGCGATTTG CGCGGCCTGCATCATCACCTCGATCATCGGCACCTTCTTCGTCAAGCTCGGCACCAATGGTTCCATCATGGGGGCGCTCT ATCGCGGGCTGATCGTGACGGGCGCGCTTTCGATCCTTGGTCTTGGCGCAGCGACGTCGCTGACGATCGGATGGGGCTCG ATCGGAACGGTCGCGGGCATGGATATCACCGGCTGGAACCTGTTTCTCTGCGGTATCATCGGTCTGATCGTCACGGCACT GATCGTCGTGATCACCGAATATTATACGGGAACGAACAAGCGACCGGTGAACTCGATCGCGCAAGCCTCGGTCACCGGCC ACGGCACCAATGTGATCCAGGGTCTTGCCGTATCGCTCGAGTCGACCGCCTTGCCGGCCATCGTCATCGTGGCCGGCATC ATCTCGACATACCAGTTTGCCGGCCTCTTCGGGACGGCCATCGCGGTGACCGCGATGCTCGGCCTTGCCGGCATGATCGT AGCGCTCGACGCCTTCGGGCCCGTGACGGACAATGCCGGCGGTATCGCCGAGATGTCGCATCTGCCACCAGAGGTGCGCA AGGCGACCGACGCATTGGACGCCGTCGGCAACACCACCAAGGCCGTGACGAAAGGTTATGCGATCGGCTCCGCGGGTCTC GGCGCCCTGGTGCTCTTCGCCGCCTATTCCAACGATCTTGCCTATTTTGCCGCCAATGGTGACAAGCATCCCTATTTCGC CGACGTCGGGACGATTTCCTTCGACCTGTCGAATCCTTACGTTGTCGCCGGGCTGATCTTCGGCGGCCTCATCCCCTATC TGTTCGGCGGTATAGCCATGACCGCCGTCGGAAGGGCAGGGAGCGCCGTCGTCGAGGAGGTTCGTCGTCAGTTCAAGGAG AAGCCGGGCATCATGGAAGGCAAGGACCGGCCGGATTATGGCCGCGCCGTCGACATGCTGACCAAGGCGGCGATCCGTGA AATGATCATTCCGTCGCTGCTCCCGGTGCTTGCGCCTATCGTCGTTTACTTCGGCGTGCTGCTGATCTCCGGCTCGAAGG CTTCTGCCTTCGCGGCGCTTGGTGCCTCGCTCCTCGGCGTTATCGTCAACGGCCTTTTCGTAGCCATATCGATGACATCG GGTGGCGGTGCCTGGGACAATGCGAAGAAGAGCTTCGAGGATGGCTTTGTCGATCGCAACGGTACCCGCCACATGAAGGG GTCTGACGCGCACATGGCCTCGGTGACGGGCGACACCGTTGGCGATCCCTACAAGGACACGGCCGGTCCAGCCGTCAATC CCGCGATCAAGATCACCAACATTGTCGCGCTCCTGCTGCTCGCCGTGCTCGCTTGA
Upstream 100 bases:
>100_bases CGCCGCGAAAATGCGCCGCTCGAGGAGGCGGCGCGTGATTCGTGGAGAGGGGCCGGCGGGAGGGAGTGAACCCGCGGGTT GTAACGGAGGAAAGTGCGAA
Downstream 100 bases:
>100_bases CGGAAGCTTCGGAGCGGGATGAGGAAACTGTGCCGGGTTTTCTGCCCTCATTCCAGCGCAAATAGAAGAAAGCCCGCGAG ATCCGGTCTCGCGGGCTTTC
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound proton-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; H(+)-PPase [H]
Number of amino acids: Translated: 711; Mature: 710
Protein sequence:
>711_residues MTILLGVIACGLLSVVYAIWATRSVLAADQGNARMQEIAGFIREGAQAYLARQYTTIAFVGVVVFIAAWVLLSGAAAIGF LIGAVLSGAAGFIGMHVSVRANVRTAQAASVSLASGLDIAFKSGAITGMLVAGLALLGVSVYYLILTAGLGHEPASREVI DALVALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV ATMVLASIFFAGAPVLATVMTYPLAICAACIITSIIGTFFVKLGTNGSIMGALYRGLIVTGALSILGLGAATSLTIGWGS IGTVAGMDITGWNLFLCGIIGLIVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVAGI ISTYQFAGLFGTAIAVTAMLGLAGMIVALDAFGPVTDNAGGIAEMSHLPPEVRKATDALDAVGNTTKAVTKGYAIGSAGL GALVLFAAYSNDLAYFAANGDKHPYFADVGTISFDLSNPYVVAGLIFGGLIPYLFGGIAMTAVGRAGSAVVEEVRRQFKE KPGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPIVVYFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTS GGGAWDNAKKSFEDGFVDRNGTRHMKGSDAHMASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA
Sequences:
>Translated_711_residues MTILLGVIACGLLSVVYAIWATRSVLAADQGNARMQEIAGFIREGAQAYLARQYTTIAFVGVVVFIAAWVLLSGAAAIGF LIGAVLSGAAGFIGMHVSVRANVRTAQAASVSLASGLDIAFKSGAITGMLVAGLALLGVSVYYLILTAGLGHEPASREVI DALVALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV ATMVLASIFFAGAPVLATVMTYPLAICAACIITSIIGTFFVKLGTNGSIMGALYRGLIVTGALSILGLGAATSLTIGWGS IGTVAGMDITGWNLFLCGIIGLIVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVAGI ISTYQFAGLFGTAIAVTAMLGLAGMIVALDAFGPVTDNAGGIAEMSHLPPEVRKATDALDAVGNTTKAVTKGYAIGSAGL GALVLFAAYSNDLAYFAANGDKHPYFADVGTISFDLSNPYVVAGLIFGGLIPYLFGGIAMTAVGRAGSAVVEEVRRQFKE KPGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPIVVYFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTS GGGAWDNAKKSFEDGFVDRNGTRHMKGSDAHMASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA >Mature_710_residues TILLGVIACGLLSVVYAIWATRSVLAADQGNARMQEIAGFIREGAQAYLARQYTTIAFVGVVVFIAAWVLLSGAAAIGFL IGAVLSGAAGFIGMHVSVRANVRTAQAASVSLASGLDIAFKSGAITGMLVAGLALLGVSVYYLILTAGLGHEPASREVID ALVALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVVA TMVLASIFFAGAPVLATVMTYPLAICAACIITSIIGTFFVKLGTNGSIMGALYRGLIVTGALSILGLGAATSLTIGWGSI GTVAGMDITGWNLFLCGIIGLIVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVAGII STYQFAGLFGTAIAVTAMLGLAGMIVALDAFGPVTDNAGGIAEMSHLPPEVRKATDALDAVGNTTKAVTKGYAIGSAGLG ALVLFAAYSNDLAYFAANGDKHPYFADVGTISFDLSNPYVVAGLIFGGLIPYLFGGIAMTAVGRAGSAVVEEVRRQFKEK PGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPIVVYFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTSG GGAWDNAKKSFEDGFVDRNGTRHMKGSDAHMASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA
Specific function: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 72311; Mature: 72180
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILLGVIACGLLSVVYAIWATRSVLAADQGNARMQEIAGFIREGAQAYLARQYTTIAFV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVVFIAAWVLLSGAAAIGFLIGAVLSGAAGFIGMHVSVRANVRTAQAASVSLASGLDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCHHHHHHHHHHCCCCCE FKSGAITGMLVAGLALLGVSVYYLILTAGLGHEPASREVIDALVALGFGASLISIFARLG ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC GGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV CCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH ATMVLASIFFAGAPVLATVMTYPLAICAACIITSIIGTFFVKLGTNGSIMGALYRGLIVT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GALSILGLGAATSLTIGWGSIGTVAGMDITGWNLFLCGIIGLIVTALIVVITEYYTGTNK HHHHHHHCCCHHEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVAGIISTYQFAGLFGTAIAVTAML CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLAGMIVALDAFGPVTDNAGGIAEMSHLPPEVRKATDALDAVGNTTKAVTKGYAIGSAGL HHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH GALVLFAAYSNDLAYFAANGDKHPYFADVGTISFDLSNPYVVAGLIFGGLIPYLFGGIAM HHHHHHHHHCCCEEEEEECCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH TAVGRAGSAVVEEVRRQFKEKPGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPI HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFVDRN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHCCCCCCC GTRHMKGSDAHMASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure TILLGVIACGLLSVVYAIWATRSVLAADQGNARMQEIAGFIREGAQAYLARQYTTIAFV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVVFIAAWVLLSGAAAIGFLIGAVLSGAAGFIGMHVSVRANVRTAQAASVSLASGLDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCHHHHHHHHHHCCCCCE FKSGAITGMLVAGLALLGVSVYYLILTAGLGHEPASREVIDALVALGFGASLISIFARLG ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHC GGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV CCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH ATMVLASIFFAGAPVLATVMTYPLAICAACIITSIIGTFFVKLGTNGSIMGALYRGLIVT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GALSILGLGAATSLTIGWGSIGTVAGMDITGWNLFLCGIIGLIVTALIVVITEYYTGTNK HHHHHHHCCCHHEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVAGIISTYQFAGLFGTAIAVTAML CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLAGMIVALDAFGPVTDNAGGIAEMSHLPPEVRKATDALDAVGNTTKAVTKGYAIGSAGL HHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH GALVLFAAYSNDLAYFAANGDKHPYFADVGTISFDLSNPYVVAGLIFGGLIPYLFGGIAM HHHHHHHHHCCCEEEEEECCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH TAVGRAGSAVVEEVRRQFKEKPGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPI HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFVDRN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHCCCCCCC GTRHMKGSDAHMASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]