Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150396050

Identifier: 150396050

GI number: 150396050

Start: 889366

End: 889902

Strand: Direct

Name: 150396050

Synonym: Smed_0826

Alternate gene names: NA

Gene position: 889366-889902 (Clockwise)

Preceding gene: 150396048

Following gene: 150396051

Centisome position: 23.52

GC content: 59.4

Gene sequence:

>537_bases
ATGATTTTTGGACTGTTCAAGAAAAAAAGCGGCAATATTGCGATTGTGAAGCGCCAATATGAGGCACTGACCGCAGCGGC
GCGCCAACCGTTTCTCTATACCGACCTCGATGTGCCCGACACGGTCATGGGTCGCTTCGAGATGTTGTCGGCGGTTCTGA
TCCTCTATTTCCGCCGCACGCGCAGCTCGGCGCGTGCCGGTCAGGAGATTGCGCAGGAGATCGTTGATGCCTTCTTCGAG
GATGTGGACCATTCCATCCGTGAGCTCGGCGTGGGTGATGTGAGCGTACCGAAGAAGATGAAGAAACTCGCCGGCATGTT
CTATGGCCGCCTCGAATCCTATGCGGCGGCGCTCGAAGGACGGGATGCCGGCGCGCTGGCGGCTGCACTGCGGCGCAATT
TTCATGCCGATGTGGAAGACGCCCCGTCGATGCGGGGGTTGGCATCCTACCTTCTTGCGGTCGAATCCGTGCTCTCGGAC
ACCGCCGAAGAGGACGTGGAAACGGGCCGTTTGCGAATCCCCACGGCCGGAACGTAA

Upstream 100 bases:

>100_bases
CGGTAAACCAGCTTCGGCTATCATGCAACATGGTCATGGGCGCTTGCCCCTGATTTCGAGAAAGCCCCCCTGATTTCGAG
AAACCTGGCCGGCCTCAGTG

Downstream 100 bases:

>100_bases
AAGCGCCGGGATCGTTCGTCGATTGGAATGTCAGCGTGCTGGCGCCTTCTTGCCCTGGCGCCGGCGCGAGGAAGGATCTG
AATATGAAGCAAGAGAGCGA

Product: ubiquinol-cytochrome C chaperone

Products: NA

Alternate protein names: Ubiquinol-Cytochrome C Reductase Chaperone; CBP3 Protein; Ubiquinol-Cytochrome C Chaperone/Upf; Ubiquinol-Cytochrome C Chaperone Superfamily; CBP3 Protein Mitochondrial; Ubiquinol-Cytochrome C Chaperone/UPF; Ubiquinol-Cytochrome C Reductase Complex Chaperone CBP

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRTRSSARAGQEIAQEIVDAFFE
DVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEGRDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSD
TAEEDVETGRLRIPTAGT

Sequences:

>Translated_178_residues
MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRTRSSARAGQEIAQEIVDAFFE
DVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEGRDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSD
TAEEDVETGRLRIPTAGT
>Mature_178_residues
MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRTRSSARAGQEIAQEIVDAFFE
DVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEGRDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSD
TAEEDVETGRLRIPTAGT

Specific function: Unknown

COG id: COG5452

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19554; Mature: 19554

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRT
CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RSSARAGQEIAQEIVDAFFEDVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSDTAEEDVETGRLRIPTAGT
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
>Mature Secondary Structure
MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRT
CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RSSARAGQEIAQEIVDAFFEDVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSDTAEEDVETGRLRIPTAGT
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA