| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396050
Identifier: 150396050
GI number: 150396050
Start: 889366
End: 889902
Strand: Direct
Name: 150396050
Synonym: Smed_0826
Alternate gene names: NA
Gene position: 889366-889902 (Clockwise)
Preceding gene: 150396048
Following gene: 150396051
Centisome position: 23.52
GC content: 59.4
Gene sequence:
>537_bases ATGATTTTTGGACTGTTCAAGAAAAAAAGCGGCAATATTGCGATTGTGAAGCGCCAATATGAGGCACTGACCGCAGCGGC GCGCCAACCGTTTCTCTATACCGACCTCGATGTGCCCGACACGGTCATGGGTCGCTTCGAGATGTTGTCGGCGGTTCTGA TCCTCTATTTCCGCCGCACGCGCAGCTCGGCGCGTGCCGGTCAGGAGATTGCGCAGGAGATCGTTGATGCCTTCTTCGAG GATGTGGACCATTCCATCCGTGAGCTCGGCGTGGGTGATGTGAGCGTACCGAAGAAGATGAAGAAACTCGCCGGCATGTT CTATGGCCGCCTCGAATCCTATGCGGCGGCGCTCGAAGGACGGGATGCCGGCGCGCTGGCGGCTGCACTGCGGCGCAATT TTCATGCCGATGTGGAAGACGCCCCGTCGATGCGGGGGTTGGCATCCTACCTTCTTGCGGTCGAATCCGTGCTCTCGGAC ACCGCCGAAGAGGACGTGGAAACGGGCCGTTTGCGAATCCCCACGGCCGGAACGTAA
Upstream 100 bases:
>100_bases CGGTAAACCAGCTTCGGCTATCATGCAACATGGTCATGGGCGCTTGCCCCTGATTTCGAGAAAGCCCCCCTGATTTCGAG AAACCTGGCCGGCCTCAGTG
Downstream 100 bases:
>100_bases AAGCGCCGGGATCGTTCGTCGATTGGAATGTCAGCGTGCTGGCGCCTTCTTGCCCTGGCGCCGGCGCGAGGAAGGATCTG AATATGAAGCAAGAGAGCGA
Product: ubiquinol-cytochrome C chaperone
Products: NA
Alternate protein names: Ubiquinol-Cytochrome C Reductase Chaperone; CBP3 Protein; Ubiquinol-Cytochrome C Chaperone/Upf; Ubiquinol-Cytochrome C Chaperone Superfamily; CBP3 Protein Mitochondrial; Ubiquinol-Cytochrome C Chaperone/UPF; Ubiquinol-Cytochrome C Reductase Complex Chaperone CBP
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRTRSSARAGQEIAQEIVDAFFE DVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEGRDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSD TAEEDVETGRLRIPTAGT
Sequences:
>Translated_178_residues MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRTRSSARAGQEIAQEIVDAFFE DVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEGRDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSD TAEEDVETGRLRIPTAGT >Mature_178_residues MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRTRSSARAGQEIAQEIVDAFFE DVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEGRDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSD TAEEDVETGRLRIPTAGT
Specific function: Unknown
COG id: COG5452
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19554; Mature: 19554
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRT CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH RSSARAGQEIAQEIVDAFFEDVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSDTAEEDVETGRLRIPTAGT CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC >Mature Secondary Structure MIFGLFKKKSGNIAIVKRQYEALTAAARQPFLYTDLDVPDTVMGRFEMLSAVLILYFRRT CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH RSSARAGQEIAQEIVDAFFEDVDHSIRELGVGDVSVPKKMKKLAGMFYGRLESYAAALEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RDAGALAAALRRNFHADVEDAPSMRGLASYLLAVESVLSDTAEEDVETGRLRIPTAGT CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA