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The map label for this gene is perM [C]

Identifier: 150396017

GI number: 150396017

Start: 850609

End: 851748

Strand: Direct

Name: perM [C]

Synonym: Smed_0793

Alternate gene names: 150396017

Gene position: 850609-851748 (Clockwise)

Preceding gene: 150396014

Following gene: 150396018

Centisome position: 22.49

GC content: 59.12

Gene sequence:

>1140_bases
ATGCCGCGCGCAACGGGGGCGGTCATGGGCGATCGGGTCAGCAGCAGGGGACTTCAGCGCCAGCTCTTTTTCTGGCTGCT
GGTGCTTGTCGGCTTCATTGCGTTTTTGCTGGTTTTCAGTTCCATTCTCCTGCCGTTCCTGGCCGGTATGGCGCTCGCTT
ATTTCCTCGACCCGGTCGCCGATCGCCTTGAACGGCTGGGCCTGAACCGGCTGATGGCAACGATCGCGATCCTCGTCGCC
TTCGTCGTCGTGCTGGCGCTATCGCTGATGATCATCGTTCCGTTGGTCTTCACGCAGGCCGCCGAATTCATCGAGAAGAT
GCCGGGATATATCACCAAGCTTCAGGCGTTCCTGACCGACAGCCAGACCACGCTTTTGCCGGATTGGCTCGCTGGCCAGA
TGGCGACCATCAAGCAAAACTCGGCCAAGCTTCTGGAGCAGGGCGCAAGTTTCCTCGGCTCGCTGTTCCAGCAGATATGG
AACTCCGGGATGGCGCTGCTCAATATCCTTTCCCTTTTCGTCATCACTCCCGTCGTCGCTTTCTACCTGTTGCTCGACTG
GGATCGTATGGTCGATAGGGTCGATAGCTGGATACCACGCGATTACGTCGAGGTGGTGCGGCAGATCGCCCGCGACATGA
ATGCGAGCATTGCCGGATTCGTTCGTGGGCAGGGCTCGCTCTGCGTGATCCTCGGCCTTTATTATGCAATTGGGCTGACA
TTGGTCGGCCTCAATTTCGGTCTCCTGATCGGCCTTTTCGCCGGTATGATCAGTTTCATTCCCTATGTGGGATCGCTGGT
CGGCCTCGTGCTCGCACTCGGCGTCGCGCTCGTTCAGTTCTGGCCCGATTACATCTGGATTCTCCTGGTTCTCGCCGTCT
TCTTCAGCGGCCAGTTTCTCGAAGGCAATATTCTTCAGCCGAAGCTGGTCGGCAGAAGCGTCGGCCTTCACCCGGTCTGG
CTGATGTTCGCCCTTCTTGCATTCGGTGCGCTTTTCGGCTTTGTCGGTCTTCTCGTGGCGGTTCCTGCGGCGGCGGCCAT
CGGCGTGCTTGTCCGCTTCGGCATCCAGCGGTACCTTGCTAGCGACCTCTATCACGGGCATAGAGCAGCCGTTCGCAAGG
AGCCGGAGAGCCACGGCTAG

Upstream 100 bases:

>100_bases
CTCCGGCCACAGACCGTTCAACTTGCGAGCGCTGCCGGACTTGACCTCGGCGCGTCGCAAGCCCTATCTCGTCGGAACGA
ACGAGGCGAAAGGGTGCGGT

Downstream 100 bases:

>100_bases
AGCGGGATGAGGAAAAGTGTGTGCGGTTTTCCGCCCGCATCCCGCTCCAACTCAATGAATCGAGCACGCCATCATCTTAG
GTCGGACCGGCCTAAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPRATGAVMGDRVSSRGLQRQLFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLERLGLNRLMATIAILVA
FVVVLALSLMIIVPLVFTQAAEFIEKMPGYITKLQAFLTDSQTTLLPDWLAGQMATIKQNSAKLLEQGASFLGSLFQQIW
NSGMALLNILSLFVITPVVAFYLLLDWDRMVDRVDSWIPRDYVEVVRQIARDMNASIAGFVRGQGSLCVILGLYYAIGLT
LVGLNFGLLIGLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYIWILLVLAVFFSGQFLEGNILQPKLVGRSVGLHPVW
LMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLASDLYHGHRAAVRKEPESHG

Sequences:

>Translated_379_residues
MPRATGAVMGDRVSSRGLQRQLFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLERLGLNRLMATIAILVA
FVVVLALSLMIIVPLVFTQAAEFIEKMPGYITKLQAFLTDSQTTLLPDWLAGQMATIKQNSAKLLEQGASFLGSLFQQIW
NSGMALLNILSLFVITPVVAFYLLLDWDRMVDRVDSWIPRDYVEVVRQIARDMNASIAGFVRGQGSLCVILGLYYAIGLT
LVGLNFGLLIGLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYIWILLVLAVFFSGQFLEGNILQPKLVGRSVGLHPVW
LMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLASDLYHGHRAAVRKEPESHG
>Mature_378_residues
PRATGAVMGDRVSSRGLQRQLFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLERLGLNRLMATIAILVAF
VVVLALSLMIIVPLVFTQAAEFIEKMPGYITKLQAFLTDSQTTLLPDWLAGQMATIKQNSAKLLEQGASFLGSLFQQIWN
SGMALLNILSLFVITPVVAFYLLLDWDRMVDRVDSWIPRDYVEVVRQIARDMNASIAGFVRGQGSLCVILGLYYAIGLTL
VGLNFGLLIGLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYIWILLVLAVFFSGQFLEGNILQPKLVGRSVGLHPVWL
MFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLASDLYHGHRAAVRKEPESHG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=334, Percent_Identity=30.5389221556886, Blast_Score=142, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41546; Mature: 41415

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRATGAVMGDRVSSRGLQRQLFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLERLGLNRLMATIAILVAFVVVLALSLMIIVPLVFTQAAEFIEKMPGYITKLQAFLTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SQTTLLPDWLAGQMATIKQNSAKLLEQGASFLGSLFQQIWNSGMALLNILSLFVITPVVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FYLLLDWDRMVDRVDSWIPRDYVEVVRQIARDMNASIAGFVRGQGSLCVILGLYYAIGLT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH
LVGLNFGLLIGLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYIWILLVLAVFFSGQFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EGNILQPKLVGRSVGLHPVWLMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLA
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLYHGHRAAVRKEPESHG
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PRATGAVMGDRVSSRGLQRQLFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLERLGLNRLMATIAILVAFVVVLALSLMIIVPLVFTQAAEFIEKMPGYITKLQAFLTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SQTTLLPDWLAGQMATIKQNSAKLLEQGASFLGSLFQQIWNSGMALLNILSLFVITPVVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FYLLLDWDRMVDRVDSWIPRDYVEVVRQIARDMNASIAGFVRGQGSLCVILGLYYAIGLT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHH
LVGLNFGLLIGLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYIWILLVLAVFFSGQFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EGNILQPKLVGRSVGLHPVWLMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLA
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLYHGHRAAVRKEPESHG
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]