| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yceG [C]
Identifier: 150395972
GI number: 150395972
Start: 801944
End: 803143
Strand: Direct
Name: yceG [C]
Synonym: Smed_0748
Alternate gene names: 150395972
Gene position: 801944-803143 (Clockwise)
Preceding gene: 150395971
Following gene: 150395977
Centisome position: 21.2
GC content: 59.83
Gene sequence:
>1200_bases GTGAGCGACTCAAACGATAACAGCGCGGTACAATTCGGCCGCAATGAAACCGGGAGCAACGGGCCGATCATTCCGAAGTC GGCCAATGAAGCGTTGCGTCCCGAGAGGGTTCCACACCCGCCGAAGCGTTCACGCAAGGCGCGCAGCCAGGTCGTCATCT TTCTCAACTTCGTCATGACCGCGGTTGTGTTCGTGGCGCTGGCGGCGGCCGGCGCCGTCTATTATGCGATGCATGAATAT GAGAAGGCGGGGCCCCTGCAGGCGAACAAGAATTTCATCGTTCGCAGCGGCGCCGGCATCAGCGAAATCGCCAGCAATCT GGAGCGCAACGAGATCATCACCGACAGCCGTGTTTTCCGCTTCGTTTCGGAAGCTTATCTGAGCAATGACACGCTCAAGG CCGGCGAGTATGAGATCAAGGCGCATGCATCGATGCAGGAGATCATGCAGCTCCTGAAATCCGGAAAGTCGATCCTCTAT TCCGTCTCGTTGCCGGAAGGTCTGACTGTGAAGCAGATGTTTCGCAAGCTTTCCGACGACCCGGTTCTGGTCGGCGACCT GCCGGCGGAACTGCCGCCGGAAGGTTCTCTGAAACCGGACACTTACAAGTTCACCCGAGGAACCGACCGTAACGAGATCG TCAAGCAGATGATCGCTGCGCAAAAGGCCCTGGTGCAGCAGATCTGGGAGAAGCGGGATCCGGACCTGCCCGTGTCAACC ATCGAGGAATTCGTCACTCTTGCCTCTATTGTGGAGAAGGAGACCGGTCGCGCGGACGAGCGGCCGCGAGTGGCCTCCGT ATTCATCAATCGCCTGGAAAAGGGCATGAGGCTGCAGTCGGATCCGACGATCATCTACGGCATCTTCGGTGGAGAAGGTA AACCCGCCGACCGGGCTATCCTGAGGTCCGACCTCGACAAGCAGACCCCATACAACACCTACCTCATCAAGGGTCTTCCG CCGACGCCGATCGCAAATCCGGGTCGCGCCGCGCTTGAAGCCGTCGCCAACCCGTCGCGCACGCCCGAACTCTATTTTGT CGCCGATGGCACTGGCGGACATGTCTTTGCCGAGACGCTCGACGAACACAACGCCAATGTCCGGCGCTGGCGCAAGCTCG AGGCGGAGAGGGCAGCGGAAGCGGCCAAGGCCACCGAAGCGGCTGAAGACGCCGTAACGCAGACTGGAACGCAGCAGTAA
Upstream 100 bases:
>100_bases CAGCAGAGGCTGCCGTAACATTCACTGGTCGCCGGTCTAAGCCGAAATTCGCACCGGCGGCGGATTGAATAACGTTGCGA GTTTCGGAATCGGGATAATC
Downstream 100 bases:
>100_bases TGCTGGCGTCCAGTACTGCTCGGGCCGCTATCGCGAAGTTTTCACTCGGCGACGGCGGGTAAGGCCGGTTCTTCCTGGCC GTTGATAGCCGCAATATAGT
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSDSNDNSAVQFGRNETGSNGPIIPKSANEALRPERVPHPPKRSRKARSQVVIFLNFVMTAVVFVALAAAGAVYYAMHEY EKAGPLQANKNFIVRSGAGISEIASNLERNEIITDSRVFRFVSEAYLSNDTLKAGEYEIKAHASMQEIMQLLKSGKSILY SVSLPEGLTVKQMFRKLSDDPVLVGDLPAELPPEGSLKPDTYKFTRGTDRNEIVKQMIAAQKALVQQIWEKRDPDLPVST IEEFVTLASIVEKETGRADERPRVASVFINRLEKGMRLQSDPTIIYGIFGGEGKPADRAILRSDLDKQTPYNTYLIKGLP PTPIANPGRAALEAVANPSRTPELYFVADGTGGHVFAETLDEHNANVRRWRKLEAERAAEAAKATEAAEDAVTQTGTQQ
Sequences:
>Translated_399_residues MSDSNDNSAVQFGRNETGSNGPIIPKSANEALRPERVPHPPKRSRKARSQVVIFLNFVMTAVVFVALAAAGAVYYAMHEY EKAGPLQANKNFIVRSGAGISEIASNLERNEIITDSRVFRFVSEAYLSNDTLKAGEYEIKAHASMQEIMQLLKSGKSILY SVSLPEGLTVKQMFRKLSDDPVLVGDLPAELPPEGSLKPDTYKFTRGTDRNEIVKQMIAAQKALVQQIWEKRDPDLPVST IEEFVTLASIVEKETGRADERPRVASVFINRLEKGMRLQSDPTIIYGIFGGEGKPADRAILRSDLDKQTPYNTYLIKGLP PTPIANPGRAALEAVANPSRTPELYFVADGTGGHVFAETLDEHNANVRRWRKLEAERAAEAAKATEAAEDAVTQTGTQQ >Mature_398_residues SDSNDNSAVQFGRNETGSNGPIIPKSANEALRPERVPHPPKRSRKARSQVVIFLNFVMTAVVFVALAAAGAVYYAMHEYE KAGPLQANKNFIVRSGAGISEIASNLERNEIITDSRVFRFVSEAYLSNDTLKAGEYEIKAHASMQEIMQLLKSGKSILYS VSLPEGLTVKQMFRKLSDDPVLVGDLPAELPPEGSLKPDTYKFTRGTDRNEIVKQMIAAQKALVQQIWEKRDPDLPVSTI EEFVTLASIVEKETGRADERPRVASVFINRLEKGMRLQSDPTIIYGIFGGEGKPADRAILRSDLDKQTPYNTYLIKGLPP TPIANPGRAALEAVANPSRTPELYFVADGTGGHVFAETLDEHNANVRRWRKLEAERAAEAAKATEAAEDAVTQTGTQQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=332, Percent_Identity=36.7469879518072, Blast_Score=200, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 43884; Mature: 43753
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSNDNSAVQFGRNETGSNGPIIPKSANEALRPERVPHPPKRSRKARSQVVIFLNFVMT CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AVVFVALAAAGAVYYAMHEYEKAGPLQANKNFIVRSGAGISEIASNLERNEIITDSRVFR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH FVSEAYLSNDTLKAGEYEIKAHASMQEIMQLLKSGKSILYSVSLPEGLTVKQMFRKLSDD HHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCC PVLVGDLPAELPPEGSLKPDTYKFTRGTDRNEIVKQMIAAQKALVQQIWEKRDPDLPVST CEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IEEFVTLASIVEKETGRADERPRVASVFINRLEKGMRLQSDPTIIYGIFGGEGKPADRAI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCHHHHH LRSDLDKQTPYNTYLIKGLPPTPIANPGRAALEAVANPSRTPELYFVADGTGGHVFAETL HHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH DEHNANVRRWRKLEAERAAEAAKATEAAEDAVTQTGTQQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDSNDNSAVQFGRNETGSNGPIIPKSANEALRPERVPHPPKRSRKARSQVVIFLNFVMT CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AVVFVALAAAGAVYYAMHEYEKAGPLQANKNFIVRSGAGISEIASNLERNEIITDSRVFR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH FVSEAYLSNDTLKAGEYEIKAHASMQEIMQLLKSGKSILYSVSLPEGLTVKQMFRKLSDD HHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCC PVLVGDLPAELPPEGSLKPDTYKFTRGTDRNEIVKQMIAAQKALVQQIWEKRDPDLPVST CEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IEEFVTLASIVEKETGRADERPRVASVFINRLEKGMRLQSDPTIIYGIFGGEGKPADRAI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCHHHHH LRSDLDKQTPYNTYLIKGLPPTPIANPGRAALEAVANPSRTPELYFVADGTGGHVFAETL HHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH DEHNANVRRWRKLEAERAAEAAKATEAAEDAVTQTGTQQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]