Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150395939
Identifier: 150395939
GI number: 150395939
Start: 767382
End: 767861
Strand: Direct
Name: 150395939
Synonym: Smed_0715
Alternate gene names: NA
Gene position: 767382-767861 (Clockwise)
Preceding gene: 150395938
Following gene: 150395940
Centisome position: 20.29
GC content: 61.67
Gene sequence:
>480_bases ATGAGTGATGCCGTCAGAACAGGAGGCTACCAGTGCGGCGGGGTCCGCTTCCGGATTCGCGGAGAGCTCGGACGTCCTTC GATCTGCCATTGCCGCATGTGCCAGAAACAGTTCGGCTCGTTCTTCTCCGCTCTGGTGACGGCGCCGGCGGGCGGCGTCG AATGGATCCGGGACGAACCGAGCTATTTCCAGTCCTCCGTCAATATCGACCGCGGCTTCTGCCCGAAATGCGGAACGCCG CTGACCTACCGGCATCCCGGCGGTCTTGAAATCGCGATTGGCGCCTTTGACGACCGCTCCGATCTCGCGCCGAAAATCCA GGTCAACTACCAGTCCCGGCTTCCGTGGGTCGAGACGATCTTCGAGCAGCCGGTTCACGAAGATCCCGATTATTATGGGC GGCAGGAGCAGATCATCTCGTTTCAGCATCCGGACCATGAGACGGAGCAATGGCCGCCCGGCGGGGTCTGGGCAAGATGA
Upstream 100 bases:
>100_bases AGACCATGGCCGACGGTGAAGCGGCCTCGTTTCTTGCCTATCTCGTTTCCTACCAGCACCCCGACCACGACACCGAAACC TGGCCACCGGAGGAAAGACG
Downstream 100 bases:
>100_bases TCGGACGCATCTTTACCGGAGGCTGCCAGTGCGGCGCGGTCCGTTACCGCGCCGAGGGCACGTTGGACGATCCGCATATC TGTCATTGCCGAATGTGTCA
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSDAVRTGGYQCGGVRFRIRGELGRPSICHCRMCQKQFGSFFSALVTAPAGGVEWIRDEPSYFQSSVNIDRGFCPKCGTP LTYRHPGGLEIAIGAFDDRSDLAPKIQVNYQSRLPWVETIFEQPVHEDPDYYGRQEQIISFQHPDHETEQWPPGGVWAR
Sequences:
>Translated_159_residues MSDAVRTGGYQCGGVRFRIRGELGRPSICHCRMCQKQFGSFFSALVTAPAGGVEWIRDEPSYFQSSVNIDRGFCPKCGTP LTYRHPGGLEIAIGAFDDRSDLAPKIQVNYQSRLPWVETIFEQPVHEDPDYYGRQEQIISFQHPDHETEQWPPGGVWAR >Mature_158_residues SDAVRTGGYQCGGVRFRIRGELGRPSICHCRMCQKQFGSFFSALVTAPAGGVEWIRDEPSYFQSSVNIDRGFCPKCGTPL TYRHPGGLEIAIGAFDDRSDLAPKIQVNYQSRLPWVETIFEQPVHEDPDYYGRQEQIISFQHPDHETEQWPPGGVWAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17994; Mature: 17863
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVRTGGYQCGGVRFRIRGELGRPSICHCRMCQKQFGSFFSALVTAPAGGVEWIRDEP CCCCCCCCCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCH SYFQSSVNIDRGFCPKCGTPLTYRHPGGLEIAIGAFDDRSDLAPKIQVNYQSRLPWVETI HHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHH FEQPVHEDPDYYGRQEQIISFQHPDHETEQWPPGGVWAR HHCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDAVRTGGYQCGGVRFRIRGELGRPSICHCRMCQKQFGSFFSALVTAPAGGVEWIRDEP CCCCCCCCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCH SYFQSSVNIDRGFCPKCGTPLTYRHPGGLEIAIGAFDDRSDLAPKIQVNYQSRLPWVETI HHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHH FEQPVHEDPDYYGRQEQIISFQHPDHETEQWPPGGVWAR HHCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA