Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150395938
Identifier: 150395938
GI number: 150395938
Start: 766903
End: 767385
Strand: Direct
Name: 150395938
Synonym: Smed_0714
Alternate gene names: NA
Gene position: 766903-767385 (Clockwise)
Preceding gene: 150395937
Following gene: 150395939
Centisome position: 20.28
GC content: 63.77
Gene sequence:
>483_bases ATGGCTGACGAAATTCATGCGGGCGGGTGCCAGTGTGGCGCGGTCCGCTTCCGTGTCGAGGGCAAACTCGCCGACGCCTC GGTCTGTCATTGCCGCATGTGCCAGAAGGCGAGCGGCAATTTCTATCTGCCGCTCGTTTCGGTGCGCGCCGCAAAACTGG TCTGGACACGCGGCGAGCGCAAGCGCTTTCAGTCCTCGAATGCCGTATGGCGCGGCTTCTGCGGCGATTGCGGAACGCCG CTGACCTACGAGGCGCCGGACGGCATGGCCCTGGCGATTGCGGCCTTCGACGAGCCCGACGGCATCGTGCCGGTCATCCA ATGGGGCATCGAGGCGAAATTGCCCTATGTCGATCACGTATCCGCCCTGCCCGGGGAAGAGACCATGGCCGACGGTGAAG CGGCCTCGTTTCTTGCCTATCTCGTTTCCTACCAGCACCCCGACCACGACACCGAAACCTGGCCACCGGAGGAAAGACGA TGA
Upstream 100 bases:
>100_bases CGGCAAGGATCCTGAGACTGGCGAACGGGTAACGACCTGGGAGGTGAAACGGTCTCAGGTCTAGGCACGTCGGGTAGAGC GGCAAGGGAGAGGAAGCGAT
Downstream 100 bases:
>100_bases GTGATGCCGTCAGAACAGGAGGCTACCAGTGCGGCGGGGTCCGCTTCCGGATTCGCGGAGAGCTCGGACGTCCTTCGATC TGCCATTGCCGCATGTGCCA
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MADEIHAGGCQCGAVRFRVEGKLADASVCHCRMCQKASGNFYLPLVSVRAAKLVWTRGERKRFQSSNAVWRGFCGDCGTP LTYEAPDGMALAIAAFDEPDGIVPVIQWGIEAKLPYVDHVSALPGEETMADGEAASFLAYLVSYQHPDHDTETWPPEERR
Sequences:
>Translated_160_residues MADEIHAGGCQCGAVRFRVEGKLADASVCHCRMCQKASGNFYLPLVSVRAAKLVWTRGERKRFQSSNAVWRGFCGDCGTP LTYEAPDGMALAIAAFDEPDGIVPVIQWGIEAKLPYVDHVSALPGEETMADGEAASFLAYLVSYQHPDHDTETWPPEERR >Mature_159_residues ADEIHAGGCQCGAVRFRVEGKLADASVCHCRMCQKASGNFYLPLVSVRAAKLVWTRGERKRFQSSNAVWRGFCGDCGTPL TYEAPDGMALAIAAFDEPDGIVPVIQWGIEAKLPYVDHVSALPGEETMADGEAASFLAYLVSYQHPDHDTETWPPEERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17548; Mature: 17417
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEIHAGGCQCGAVRFRVEGKLADASVCHCRMCQKASGNFYLPLVSVRAAKLVWTRGER CCCCCCCCCCEECEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEHHHHEEEEEEECCHH KRFQSSNAVWRGFCGDCGTPLTYEAPDGMALAIAAFDEPDGIVPVIQWGIEAKLPYVDHV HHHCCCCCEEEECCCCCCCCCEEECCCCEEEEEEEECCCCCEEHEEECCCCCCCCCHHHH SALPGEETMADGEAASFLAYLVSYQHPDHDTETWPPEERR CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ADEIHAGGCQCGAVRFRVEGKLADASVCHCRMCQKASGNFYLPLVSVRAAKLVWTRGER CCCCCCCCCEECEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEHHHHEEEEEEECCHH KRFQSSNAVWRGFCGDCGTPLTYEAPDGMALAIAAFDEPDGIVPVIQWGIEAKLPYVDHV HHHCCCCCEEEECCCCCCCCCEEECCCCEEEEEEEECCCCCEEHEEECCCCCCCCCHHHH SALPGEETMADGEAASFLAYLVSYQHPDHDTETWPPEERR CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA