Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is nadA [H]
Identifier: 150395923
GI number: 150395923
Start: 754451
End: 755530
Strand: Direct
Name: nadA [H]
Synonym: Smed_0699
Alternate gene names: 150395923
Gene position: 754451-755530 (Clockwise)
Preceding gene: 150395922
Following gene: 150395924
Centisome position: 19.95
GC content: 59.63
Gene sequence:
>1080_bases ATGACCACTCTTAACCTTCGCAAGGATGCGGCGCCCGCTCCGGCCTTCGTGAGCGCTGCGGCACGCTTCGGCGTCATCGA AAAACCCGATCTCGCCTTCACCCCGGCTGTCGCACGCGAGACCGAGCATCTCTACGAGAAGGTCAAGGACTTCATCCCCG CATTCGAGTGGGCGGCCTATGCGCCCTATGTCCATGCGATCAACCGGCTGAAGAAGGAACGCAACGCGGTCATCCTCGCT CACAATTACCAGACGCCGGATATTTTTCACTGCGTGGCGGACATCGTCGGCGATTCGCTCCAACTCGCGCGCGACGCCAC TAAAGTGGACGCCGAGATCATCATTCAGTGCGGCGTGCACTTCATGGCCGAGACGTCGAAGCTGCTCAACCCGGAAAAAA CGGTCCTCATTCCGGATGCCAGAGCAGGGTGCTCGCTGTCGGAGTCGATCACCGGCGCGGATGTGCGGCTCCTCAAGGAG CGCTATCCGGGTGTGCCGGTCGTTACCTATGTCAACACATCGGCCGATGTGAAGGCGGAGACCGACATCTGCTGCACCTC GTCCAACGTGCTGGCAGTGGTTGAAAGTCTGGAATCCGATACCGTGCTCTGCATCCCCGACGAATATCTGGCGATGAACG TGGCGCGAGAGACGAACAAGAAGATCCTGACCTGGAAAGGTCACTGCGAGGTTCACGAGCGTTTCACGGCAGCCGAACTC CTGGCTTACAAGGAAGCCAATCCCGGCATCGAGATCGTCGGCCATCCGGAATGCCACCCCGACGTCATCGCCGTCTGCGA CTTCTCCGGATCCACCTCGGGCATGATCAATTACGTCAAGGACAAACGGCCTCAACGCGTGCTGCTCGTGACCGAATGCT CGATGGCATCGAATATTCAGGCGGAGGTCAAAGGCGTGGATTTCGTAAAGCCCTGCAATCTGTGTCCGCACATGAAGCGC ATCACGCTGCCGAAGATCTTCGACAGCCTGCTCACCATGACGGAAGAGGTTCTGGTCGACCCCGCGATCGCCGACCGCGC GCGGCTCGCAGTCGAGCGCATGGTGAACCTCAAGCAGTGA
Upstream 100 bases:
>100_bases TTCTAAATCAGTCACGGCGGCTTAGCCGCTTTTGTTTTGCACCAATTATGCTCAATGTGAGCATAATTGTATCACCGGCA CGGTGAGAGAGGAGATCCCG
Downstream 100 bases:
>100_bases TCGTTCGGCCGGAGTCGTTCCGGCAGGCATGCCGAGGCATGCAGGGTTCAAATACTGCGGCAGATTTGCGTGTCAGAGAG GACGCGCGGCGCCGCAGGTC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTTLNLRKDAAPAPAFVSAAARFGVIEKPDLAFTPAVARETEHLYEKVKDFIPAFEWAAYAPYVHAINRLKKERNAVILA HNYQTPDIFHCVADIVGDSLQLARDATKVDAEIIIQCGVHFMAETSKLLNPEKTVLIPDARAGCSLSESITGADVRLLKE RYPGVPVVTYVNTSADVKAETDICCTSSNVLAVVESLESDTVLCIPDEYLAMNVARETNKKILTWKGHCEVHERFTAAEL LAYKEANPGIEIVGHPECHPDVIAVCDFSGSTSGMINYVKDKRPQRVLLVTECSMASNIQAEVKGVDFVKPCNLCPHMKR ITLPKIFDSLLTMTEEVLVDPAIADRARLAVERMVNLKQ
Sequences:
>Translated_359_residues MTTLNLRKDAAPAPAFVSAAARFGVIEKPDLAFTPAVARETEHLYEKVKDFIPAFEWAAYAPYVHAINRLKKERNAVILA HNYQTPDIFHCVADIVGDSLQLARDATKVDAEIIIQCGVHFMAETSKLLNPEKTVLIPDARAGCSLSESITGADVRLLKE RYPGVPVVTYVNTSADVKAETDICCTSSNVLAVVESLESDTVLCIPDEYLAMNVARETNKKILTWKGHCEVHERFTAAEL LAYKEANPGIEIVGHPECHPDVIAVCDFSGSTSGMINYVKDKRPQRVLLVTECSMASNIQAEVKGVDFVKPCNLCPHMKR ITLPKIFDSLLTMTEEVLVDPAIADRARLAVERMVNLKQ >Mature_358_residues TTLNLRKDAAPAPAFVSAAARFGVIEKPDLAFTPAVARETEHLYEKVKDFIPAFEWAAYAPYVHAINRLKKERNAVILAH NYQTPDIFHCVADIVGDSLQLARDATKVDAEIIIQCGVHFMAETSKLLNPEKTVLIPDARAGCSLSESITGADVRLLKER YPGVPVVTYVNTSADVKAETDICCTSSNVLAVVESLESDTVLCIPDEYLAMNVARETNKKILTWKGHCEVHERFTAAELL AYKEANPGIEIVGHPECHPDVIAVCDFSGSTSGMINYVKDKRPQRVLLVTECSMASNIQAEVKGVDFVKPCNLCPHMKRI TLPKIFDSLLTMTEEVLVDPAIADRARLAVERMVNLKQ
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=315, Percent_Identity=33.6507936507937, Blast_Score=162, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 39580; Mature: 39449
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLNLRKDAAPAPAFVSAAARFGVIEKPDLAFTPAVARETEHLYEKVKDFIPAFEWAAY CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH APYVHAINRLKKERNAVILAHNYQTPDIFHCVADIVGDSLQLARDATKVDAEIIIQCGVH HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHH FMAETSKLLNPEKTVLIPDARAGCSLSESITGADVRLLKERYPGVPVVTYVNTSADVKAE HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEC TDICCTSSNVLAVVESLESDTVLCIPDEYLAMNVARETNKKILTWKGHCEVHERFTAAEL CCEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH LAYKEANPGIEIVGHPECHPDVIAVCDFSGSTSGMINYVKDKRPQRVLLVTECSMASNIQ HHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCH AEVKGVDFVKPCNLCPHMKRITLPKIFDSLLTMTEEVLVDPAIADRARLAVERMVNLKQ HHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTLNLRKDAAPAPAFVSAAARFGVIEKPDLAFTPAVARETEHLYEKVKDFIPAFEWAAY CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH APYVHAINRLKKERNAVILAHNYQTPDIFHCVADIVGDSLQLARDATKVDAEIIIQCGVH HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHH FMAETSKLLNPEKTVLIPDARAGCSLSESITGADVRLLKERYPGVPVVTYVNTSADVKAE HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEC TDICCTSSNVLAVVESLESDTVLCIPDEYLAMNVARETNKKILTWKGHCEVHERFTAAEL CCEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH LAYKEANPGIEIVGHPECHPDVIAVCDFSGSTSGMINYVKDKRPQRVLLVTECSMASNIQ HHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCH AEVKGVDFVKPCNLCPHMKRITLPKIFDSLLTMTEEVLVDPAIADRARLAVERMVNLKQ HHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]