| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395853
Identifier: 150395853
GI number: 150395853
Start: 675193
End: 675444
Strand: Direct
Name: 150395853
Synonym: Smed_0629
Alternate gene names: NA
Gene position: 675193-675444 (Clockwise)
Preceding gene: 150395851
Following gene: 150395854
Centisome position: 17.85
GC content: 67.06
Gene sequence:
>252_bases ATGTCTTCAGCATTGACCATAGCCGCGCTCGCCGCAGGCCTCGCAGGTTTTTCTCCGCCTGCCGTCGACATGCCTGCGGT TGTCGTCCGCGTGGCAGGCGACTGCAGCGCGGCTGCCGCGCAGGTCGTCGCGCAGACGGGTGGCGAGCTGCTCTCCGCCC AGCCGACCGGCGACGGGCAATGCGTGGTGACGGTGCTCATCCCCGGCAATGGAGGGCGCCCCAAGAAAGTCACGGTGAAG GTGCCTATGTAA
Upstream 100 bases:
>100_bases GACACCGACCCTGCCGATCTCCGGGCTGACATTCATTTGCCATTCAGCCTGTATCGGTTAATGATTTTGACGTAGAGCTT CCCAAGTCGAAAGTGCGTTC
Downstream 100 bases:
>100_bases GAGCTCTTTCGGGGTGTCCGAAAGCAAGGGAAGTGGACGAGAATGCGCATTCTGATCGTCGAGGACGATACCAATCTGAA CAGGCAATTGGCTGAAGCGC
Product: putative signal peptide protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSSALTIAALAAGLAGFSPPAVDMPAVVVRVAGDCSAAAAQVVAQTGGELLSAQPTGDGQCVVTVLIPGNGGRPKKVTVK VPM
Sequences:
>Translated_83_residues MSSALTIAALAAGLAGFSPPAVDMPAVVVRVAGDCSAAAAQVVAQTGGELLSAQPTGDGQCVVTVLIPGNGGRPKKVTVK VPM >Mature_82_residues SSALTIAALAAGLAGFSPPAVDMPAVVVRVAGDCSAAAAQVVAQTGGELLSAQPTGDGQCVVTVLIPGNGGRPKKVTVKV PM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8014; Mature: 7883
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSALTIAALAAGLAGFSPPAVDMPAVVVRVAGDCSAAAAQVVAQTGGELLSAQPTGDGQ CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCC CVVTVLIPGNGGRPKKVTVKVPM EEEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure SSALTIAALAAGLAGFSPPAVDMPAVVVRVAGDCSAAAAQVVAQTGGELLSAQPTGDGQ CCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCC CVVTVLIPGNGGRPKKVTVKVPM EEEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA