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The map label for this gene is rpl18p

Identifier: 150401825

GI number: 150401825

Start: 1458585

End: 1459169

Strand: Direct

Name: rpl18p

Synonym: Maeo_1403

Alternate gene names: 150401825

Gene position: 1458585-1459169 (Clockwise)

Preceding gene: 150401824

Following gene: 150401826

Centisome position: 92.93

GC content: 33.68

Gene sequence:

>585_bases
ATGGCACACGGTGCTAAATATAGGGTCCCTTTTAGAAGAAGAAGGGAAGGAAAAACGAATTTCAGATTAAGATTAAAGTT
ATTATTGTCAAGAACACCAAGATTAGTTGCGAGAAAATCATTAAATAATATAGTAGCTCAAATTGTTGAATATGATGAAG
TTGGAGATAAAATTGTTGTTTCTGCACATTCCAAAGAAATTGTAAAATTGGGATATAAAGGACACTGTGGAAATGTTCCA
GCAGCATATTTAACTGGATTGTTATTGGGTAAAAAAGCACTTAAAGAAGGAAATGAAGAAGCAATTCTTGATTTAGGACT
AAACAGTGCTACAAAAGGAGCAGCTGTTCTTGCTATCTTAAAAGGAGCTGTTGATGCAGGTATGGATATTCCACACAGTG
AGGAAATACTTCCTGGAGAAGATAGAATAAATGGTTCCCATGTGAAAGAATACGCGGAGCTCCTTAAAGTAGAAGACGAA
GAAAAATATAATAAACAGTTTTCAAAGTATTTGAAAAACGGATTAAATCCAGAAGATTTGCCAGAACACTTTGAAGAAAT
AAAAGAGAAGATTCTCAGCTTATAA

Upstream 100 bases:

>100_bases
TATATAGGATGGCAAAAGGTGGGGCATTCAGAAGTAAAAATCACATGAAATTATACATGGAAGACCACGACCTTCTTAAA
TAAATAATTGAGGTGCAAAT

Downstream 100 bases:

>100_bases
TGGTGATTACAGTGGCGGCTGAAAAAAAGAAATTTAATGTAGATGCTTGGGAACCTAAAACCCAGGTTGGAAAAAAGGTA
AAAGAAGGAACCATTACAGA

Product: 50S ribosomal protein L18P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAHGAKYRVPFRRRREGKTNFRLRLKLLLSRTPRLVARKSLNNIVAQIVEYDEVGDKIVVSAHSKEIVKLGYKGHCGNVP
AAYLTGLLLGKKALKEGNEEAILDLGLNSATKGAAVLAILKGAVDAGMDIPHSEEILPGEDRINGSHVKEYAELLKVEDE
EKYNKQFSKYLKNGLNPEDLPEHFEEIKEKILSL

Sequences:

>Translated_194_residues
MAHGAKYRVPFRRRREGKTNFRLRLKLLLSRTPRLVARKSLNNIVAQIVEYDEVGDKIVVSAHSKEIVKLGYKGHCGNVP
AAYLTGLLLGKKALKEGNEEAILDLGLNSATKGAAVLAILKGAVDAGMDIPHSEEILPGEDRINGSHVKEYAELLKVEDE
EKYNKQFSKYLKNGLNPEDLPEHFEEIKEKILSL
>Mature_193_residues
AHGAKYRVPFRRRREGKTNFRLRLKLLLSRTPRLVARKSLNNIVAQIVEYDEVGDKIVVSAHSKEIVKLGYKGHCGNVPA
AYLTGLLLGKKALKEGNEEAILDLGLNSATKGAAVLAILKGAVDAGMDIPHSEEILPGEDRINGSHVKEYAELLKVEDEE
KYNKQFSKYLKNGLNPEDLPEHFEEIKEKILSL

Specific function: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance

COG id: COG0256

COG function: function code J; Ribosomal protein L18

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L18P family

Homologues:

Organism=Homo sapiens, GI14591909, Length=232, Percent_Identity=34.9137931034483, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17534333, Length=236, Percent_Identity=35.5932203389831, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6325126, Length=237, Percent_Identity=32.0675105485232, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI116007384, Length=233, Percent_Identity=33.9055793991416, Blast_Score=123, Evalue=6e-29,
Organism=Drosophila melanogaster, GI116007382, Length=233, Percent_Identity=33.9055793991416, Blast_Score=123, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL18_META3 (A6UWV7)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325591.1
- ProteinModelPortal:   A6UWV7
- SMR:   A6UWV7
- STRING:   A6UWV7
- GeneID:   5327455
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1403
- eggNOG:   arNOG08828
- HOGENOM:   HBG391676
- OMA:   GNTPSAY
- ProtClustDB:   PRK08569
- BioCyc:   MAEO419665:MAEO_1403-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01337_A
- InterPro:   IPR005484
- InterPro:   IPR005485
- PANTHER:   PTHR23410

Pfam domain/function: PF00861 Ribosomal_L18p

EC number: NA

Molecular weight: Translated: 21641; Mature: 21510

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHGAKYRVPFRRRREGKTNFRLRLKLLLSRTPRLVARKSLNNIVAQIVEYDEVGDKIVV
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SAHSKEIVKLGYKGHCGNVPAAYLTGLLLGKKALKEGNEEAILDLGLNSATKGAAVLAIL
ECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHH
KGAVDAGMDIPHSEEILPGEDRINGSHVKEYAELLKVEDEEKYNKQFSKYLKNGLNPEDL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
PEHFEEIKEKILSL
HHHHHHHHHHHHCC
>Mature Secondary Structure 
AHGAKYRVPFRRRREGKTNFRLRLKLLLSRTPRLVARKSLNNIVAQIVEYDEVGDKIVV
CCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SAHSKEIVKLGYKGHCGNVPAAYLTGLLLGKKALKEGNEEAILDLGLNSATKGAAVLAIL
ECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHH
KGAVDAGMDIPHSEEILPGEDRINGSHVKEYAELLKVEDEEKYNKQFSKYLKNGLNPEDL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
PEHFEEIKEKILSL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA