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The map label for this gene is rpl19e [H]

Identifier: 150401824

GI number: 150401824

Start: 1458121

End: 1458567

Strand: Direct

Name: rpl19e [H]

Synonym: Maeo_1402

Alternate gene names: 150401824

Gene position: 1458121-1458567 (Clockwise)

Preceding gene: 150401823

Following gene: 150401825

Centisome position: 92.9

GC content: 36.24

Gene sequence:

>447_bases
ATGGATATATCAACCCAAAGAAGAATTGCATCCGATGTATTGGATTGCGGTATTGATAGGGTATGGATAGACCCTGAGAA
TTTGGACAAGGTTAAATTTGCCATAACCAAAGATGACATCAGGGCATTAATAAAAGACGGTATTATTGTTAAGAAACAGA
AAAAAGGGATTAGCTCAGGAAGAGCTAAAAAATTGAAAGAACAGAAGAGGAAAGGAAAGAGGAAAGGACAGGGTTCAAGA
AAAGGGGCAAAAGGTGCAAGAACACCTAAAAAGAGGAAATGGATAAACACAATAAGACCATTAAGATGTATGTTAAAGGA
GCTCCGAGAAGAGGAGTCAATTGAAGTATCATCTTATAGAAAATTATATAGGATGGCAAAAGGTGGGGCATTCAGAAGTA
AAAATCACATGAAATTATACATGGAAGACCACGACCTTCTTAAATAA

Upstream 100 bases:

>100_bases
TAAGGCAGAGGAAGTAGCGGAAAATCCTGAAACCGAAACAGAAGAAACAGAAACAGAAGAAAATTAATAATAAAATATTA
TTATTCTTATAGGTGGTATA

Downstream 100 bases:

>100_bases
ATAATTGAGGTGCAAATATGGCACACGGTGCTAAATATAGGGTCCCTTTTAGAAGAAGAAGGGAAGGAAAAACGAATTTC
AGATTAAGATTAAAGTTATT

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: ORF E [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDISTQRRIASDVLDCGIDRVWIDPENLDKVKFAITKDDIRALIKDGIIVKKQKKGISSGRAKKLKEQKRKGKRKGQGSR
KGAKGARTPKKRKWINTIRPLRCMLKELREEESIEVSSYRKLYRMAKGGAFRSKNHMKLYMEDHDLLK

Sequences:

>Translated_148_residues
MDISTQRRIASDVLDCGIDRVWIDPENLDKVKFAITKDDIRALIKDGIIVKKQKKGISSGRAKKLKEQKRKGKRKGQGSR
KGAKGARTPKKRKWINTIRPLRCMLKELREEESIEVSSYRKLYRMAKGGAFRSKNHMKLYMEDHDLLK
>Mature_148_residues
MDISTQRRIASDVLDCGIDRVWIDPENLDKVKFAITKDDIRALIKDGIIVKKQKKGISSGRAKKLKEQKRKGKRKGQGSR
KGAKGARTPKKRKWINTIRPLRCMLKELREEESIEVSSYRKLYRMAKGGAFRSKNHMKLYMEDHDLLK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=129, Percent_Identity=40.3100775193798, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508673, Length=122, Percent_Identity=37.7049180327869, Blast_Score=95, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6319559, Length=133, Percent_Identity=36.8421052631579, Blast_Score=83, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319444, Length=133, Percent_Identity=36.8421052631579, Blast_Score=83, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45552831, Length=141, Percent_Identity=37.5886524822695, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17136322, Length=141, Percent_Identity=37.5886524822695, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 17184; Mature: 17184

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISTQRRIASDVLDCGIDRVWIDPENLDKVKFAITKDDIRALIKDGIIVKKQKKGISSG
CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHEEECHHHHHHHHHCCEEEEHHHCCCCCH
RAKKLKEQKRKGKRKGQGSRKGAKGARTPKKRKWINTIRPLRCMLKELREEESIEVSSYR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KLYRMAKGGAFRSKNHMKLYMEDHDLLK
HHHHHHCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MDISTQRRIASDVLDCGIDRVWIDPENLDKVKFAITKDDIRALIKDGIIVKKQKKGISSG
CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHEEECHHHHHHHHHCCEEEEHHHCCCCCH
RAKKLKEQKRKGKRKGQGSRKGAKGARTPKKRKWINTIRPLRCMLKELREEESIEVSSYR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KLYRMAKGGAFRSKNHMKLYMEDHDLLK
HHHHHHCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2530355 [H]