Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is yeaB [H]
Identifier: 150401788
GI number: 150401788
Start: 1428158
End: 1429426
Strand: Direct
Name: yeaB [H]
Synonym: Maeo_1366
Alternate gene names: 150401788
Gene position: 1428158-1429426 (Clockwise)
Preceding gene: 150401787
Following gene: 150401791
Centisome position: 90.99
GC content: 30.5
Gene sequence:
>1269_bases ATGGAAAAAATAGAAAAAGGAAAAAAAGTAATGGTTGTAAGTGCCATATTAACATTATTTGTAGCAATTTTAAAAGGAAT TATTGGGTATATTTCTGGAAGTGTTGCACTTATTGCAGATGCATTGCATTCTTTATCTGATGTATTGGGCCCTATTGCAG TGTATGTGGGGCTAAAAATTTCCCAGAAAAAACCAAATATGAAATTTCCATATGGGTATAGTAGGGCGGAAACTCTTGCA TCTCTATTTGTGTCATTTATAATATTTTTAACGGGAGTAGAAACGCTAAGGCAATCTATTGATAAATTTTTTAATCCGTC TCCAATATCTCATTATGGTGCAGTAATTATAGTAGTATTAATTTCTATTGGTATCACATATTATTTATACAAATATAAGA CAAAAGTAGGTGTCGAAATAGGTTCCGATGCCATGATTGGCGAAGGAGCTCACTCTTTGGTGGATGCATATACCACAGTT GCCATATTATTTGCTGTTGCTGGTTCTTATATGGGATATTATATAGTGGAACCAATTGTTGGAGGAATAATAAGTTTTAT AGTAATAGGATTGGGCTTAAAAATGGTTAAAAATGATATTTATACCTTAATGGATTTTTGTGATGGGGAAACCATCAACG AAATAAAAAAAATAACATTAAGTGTTAAGGGGGTCGAGGGAGCTCACAATATAAAGGCACGAAAATCTGGACCATTTATT CATTGTGATATGCACATTGAAGTAGATGAGGAGCTCCCTTTTAAAGTGGCACATGAAATTTCGGAAACCGTTGAAAAAGA GATAAAGAATAATATACAGAATATTAACGGCATTATTATTCATACAGACCCAATAATGAAAAAAGATGCCATAATAGCAA TTCCAATAATGGTAAATGATAATGAAGTAAATTTAATGGAAACCAACAATGGCATAAATAAAACCACAATAACCAATTCA CACATGGAAAAGGCATTTAATTACAAAATAAATGACAAATTTGCCACTGCAAAATATTTTTTAATTATTGAAATGGATTG TGATATTATCAACGGATATAGAATTATAGAAAATACATTGAATAAATTGAATAGAAAAAAAGCCATGGCAATTTTTGATT TATTATATTCGTATGATGTAAATACCGTCATTGTTAAAAATATCGGGGCCGGCATGGATAATACTCTTAGAAGTAGAGGT ATTAAAATTATTAAAACCGATAAAGATACACCAAAAGATGCATTATTGGATATCAAAAAAATAAAATAA
Upstream 100 bases:
>100_bases TAAACAATTTACAATTTTTCAATTACAATATATTTTTCCCATAATATTAAATATATTTAAAACAACCATATTTTAAGAAA AAAATATATGTTGTGTAATT
Downstream 100 bases:
>100_bases AATAATAATAAAGATATAAAATAAAAATAATATATTTTTATGGTTATTCTGGTTTTTCCATTAATTTGGTTTTATTTAAT CTTTTTCCATCTGCTCCGTG
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MEKIEKGKKVMVVSAILTLFVAILKGIIGYISGSVALIADALHSLSDVLGPIAVYVGLKISQKKPNMKFPYGYSRAETLA SLFVSFIIFLTGVETLRQSIDKFFNPSPISHYGAVIIVVLISIGITYYLYKYKTKVGVEIGSDAMIGEGAHSLVDAYTTV AILFAVAGSYMGYYIVEPIVGGIISFIVIGLGLKMVKNDIYTLMDFCDGETINEIKKITLSVKGVEGAHNIKARKSGPFI HCDMHIEVDEELPFKVAHEISETVEKEIKNNIQNINGIIIHTDPIMKKDAIIAIPIMVNDNEVNLMETNNGINKTTITNS HMEKAFNYKINDKFATAKYFLIIEMDCDIINGYRIIENTLNKLNRKKAMAIFDLLYSYDVNTVIVKNIGAGMDNTLRSRG IKIIKTDKDTPKDALLDIKKIK
Sequences:
>Translated_422_residues MEKIEKGKKVMVVSAILTLFVAILKGIIGYISGSVALIADALHSLSDVLGPIAVYVGLKISQKKPNMKFPYGYSRAETLA SLFVSFIIFLTGVETLRQSIDKFFNPSPISHYGAVIIVVLISIGITYYLYKYKTKVGVEIGSDAMIGEGAHSLVDAYTTV AILFAVAGSYMGYYIVEPIVGGIISFIVIGLGLKMVKNDIYTLMDFCDGETINEIKKITLSVKGVEGAHNIKARKSGPFI HCDMHIEVDEELPFKVAHEISETVEKEIKNNIQNINGIIIHTDPIMKKDAIIAIPIMVNDNEVNLMETNNGINKTTITNS HMEKAFNYKINDKFATAKYFLIIEMDCDIINGYRIIENTLNKLNRKKAMAIFDLLYSYDVNTVIVKNIGAGMDNTLRSRG IKIIKTDKDTPKDALLDIKKIK >Mature_422_residues MEKIEKGKKVMVVSAILTLFVAILKGIIGYISGSVALIADALHSLSDVLGPIAVYVGLKISQKKPNMKFPYGYSRAETLA SLFVSFIIFLTGVETLRQSIDKFFNPSPISHYGAVIIVVLISIGITYYLYKYKTKVGVEIGSDAMIGEGAHSLVDAYTTV AILFAVAGSYMGYYIVEPIVGGIISFIVIGLGLKMVKNDIYTLMDFCDGETINEIKKITLSVKGVEGAHNIKARKSGPFI HCDMHIEVDEELPFKVAHEISETVEKEIKNNIQNINGIIIHTDPIMKKDAIIAIPIMVNDNEVNLMETNNGINKTTITNS HMEKAFNYKINDKFATAKYFLIIEMDCDIINGYRIIENTLNKLNRKKAMAIFDLLYSYDVNTVIVKNIGAGMDNTLRSRG IKIIKTDKDTPKDALLDIKKIK
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=263, Percent_Identity=27.3764258555133, Blast_Score=105, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6325032, Length=234, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323831, Length=221, Percent_Identity=24.4343891402715, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 46782; Mature: 46782
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIEKGKKVMVVSAILTLFVAILKGIIGYISGSVALIADALHSLSDVLGPIAVYVGLKI CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEE SQKKPNMKFPYGYSRAETLASLFVSFIIFLTGVETLRQSIDKFFNPSPISHYGAVIIVVL ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ISIGITYYLYKYKTKVGVEIGSDAMIGEGAHSLVDAYTTVAILFAVAGSYMGYYIVEPIV HHHHHHHHHHHEEHEECEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGIISFIVIGLGLKMVKNDIYTLMDFCDGETINEIKKITLSVKGVEGAHNIKARKSGPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCEE HCDMHIEVDEELPFKVAHEISETVEKEIKNNIQNINGIIIHTDPIMKKDAIIAIPIMVND EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEEC NEVNLMETNNGINKTTITNSHMEKAFNYKINDKFATAKYFLIIEMDCDIINGYRIIENTL CEEEEEECCCCCCCCEECHHHHHHHHCCEECCCEEEEEEEEEEEECCCEECCHHHHHHHH NKLNRKKAMAIFDLLYSYDVNTVIVKNIGAGMDNTLRSRGIKIIKTDKDTPKDALLDIKK HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCEEEEECCCCCCHHHHHHHHC IK CC >Mature Secondary Structure MEKIEKGKKVMVVSAILTLFVAILKGIIGYISGSVALIADALHSLSDVLGPIAVYVGLKI CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEE SQKKPNMKFPYGYSRAETLASLFVSFIIFLTGVETLRQSIDKFFNPSPISHYGAVIIVVL ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ISIGITYYLYKYKTKVGVEIGSDAMIGEGAHSLVDAYTTVAILFAVAGSYMGYYIVEPIV HHHHHHHHHHHEEHEECEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGIISFIVIGLGLKMVKNDIYTLMDFCDGETINEIKKITLSVKGVEGAHNIKARKSGPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCEE HCDMHIEVDEELPFKVAHEISETVEKEIKNNIQNINGIIIHTDPIMKKDAIIAIPIMVND EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEEC NEVNLMETNNGINKTTITNSHMEKAFNYKINDKFATAKYFLIIEMDCDIINGYRIIENTL CEEEEEECCCCCCCCEECHHHHHHHHCCEECCCEEEEEEEEEEEECCCEECCHHHHHHHH NKLNRKKAMAIFDLLYSYDVNTVIVKNIGAGMDNTLRSRGIKIIKTDKDTPKDALLDIKK HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCEEEEECCCCCCHHHHHHHHC IK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 8951816 [H]