Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is asd [H]
Identifier: 150401791
GI number: 150401791
Start: 1432072
End: 1433121
Strand: Direct
Name: asd [H]
Synonym: Maeo_1369
Alternate gene names: 150401791
Gene position: 1432072-1433121 (Clockwise)
Preceding gene: 150401788
Following gene: 150401792
Centisome position: 91.24
GC content: 35.52
Gene sequence:
>1050_bases ATGATAAAAGTAGGAGTTTTAGGAGCTACTGGAAATGTGGGACAAAGATTTATGCAAATGCTTGAAAACCACCCCATATT TGAATTAGAAGTATTGGGAGCATCATCAAGGAGTGCAGGTAAAAAATATGCTGACGCTTGTTATTGGTATCAAACAGAGC CAATTCCTGAAGAATATGCAAATAAAATGGTGCAAACAACCGACCCAACAGACAAAGCTTATGAGGATGTAGATATAGTA TTTTCAGCATTACCTTCCGATTTAGCAAAAAAATTAGAACCAGAATTCGCAAAAGAGGGAAAATTAGTTTTCTCAAACGC ATCAGCTATGAGAATGGAAAATGATGTTCCGTTAATGATTCCAGAAGTAAACTATGACCATTTCGAGATGCTGGACATAC AAAGAGAAAATAGAAATTATGATGGTGCAATAATTACAAATCCAAATTGTTCGACAATATGTGCCGTAATTACGCTAAAA CCAATTATGGATAAATTTGGTATTGATTTGGTTAATATTACCACAATGCAGGCAATAAGTGGGGCAGGGTATAATGGAGT TCCATCTATGGCAATAATTGATAATCTTGTGCCTTACATCGGTAGTGAAGAGGAAAAGATGCAAACTGAAAGTTTAAAAC TATTAGGGGCAATAGATAAAGAAAATAATAAATTTACAGACGCAAACTTTAAAATTGGAGTATCCTGTAATAGGGTTTCA GTAATTGATGGGCATACGGAAAGTATATTCGTAAAAACAACAGAAGAAGCTACGCCAGAAGAAATTAAAAAAGTTATGGA CAAATTCGACCCATTAAAAGAATACAACCTTCCAACCTATGCAAAACCTATTGTTATTAGGGAAGAGATGGACAGACCAC AGCCAAGATTGGATAGGGATGCAGGAAATGGTATGAGTATAAGTGTAGGGAGAATTAGGGAAGATCCAGTATTTGGCATA AAATATACGGCATTGGAACACAACACCATAAGGGGGGCTGCTGGTGCAAGTGTTTTAAATGCTGAGTTGTATGTTAAAAA ATATCTTTAA
Upstream 100 bases:
>100_bases GATTATTATAAATAATAGTATAAATAACATAATAGAATTAATAAAATTATAATATATAATATAATAAAATTATAATATAT ATAATATACCCGGTGATAAA
Downstream 100 bases:
>100_bases AATTATATTTAAAGCATAATTAAAGCATAATTAAAATATTATACAATAATTAAATAATATTAAAAAACCAAATAATTTAT TTTTTCATATCTATTTTTTA
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MIKVGVLGATGNVGQRFMQMLENHPIFELEVLGASSRSAGKKYADACYWYQTEPIPEEYANKMVQTTDPTDKAYEDVDIV FSALPSDLAKKLEPEFAKEGKLVFSNASAMRMENDVPLMIPEVNYDHFEMLDIQRENRNYDGAIITNPNCSTICAVITLK PIMDKFGIDLVNITTMQAISGAGYNGVPSMAIIDNLVPYIGSEEEKMQTESLKLLGAIDKENNKFTDANFKIGVSCNRVS VIDGHTESIFVKTTEEATPEEIKKVMDKFDPLKEYNLPTYAKPIVIREEMDRPQPRLDRDAGNGMSISVGRIREDPVFGI KYTALEHNTIRGAAGASVLNAELYVKKYL
Sequences:
>Translated_349_residues MIKVGVLGATGNVGQRFMQMLENHPIFELEVLGASSRSAGKKYADACYWYQTEPIPEEYANKMVQTTDPTDKAYEDVDIV FSALPSDLAKKLEPEFAKEGKLVFSNASAMRMENDVPLMIPEVNYDHFEMLDIQRENRNYDGAIITNPNCSTICAVITLK PIMDKFGIDLVNITTMQAISGAGYNGVPSMAIIDNLVPYIGSEEEKMQTESLKLLGAIDKENNKFTDANFKIGVSCNRVS VIDGHTESIFVKTTEEATPEEIKKVMDKFDPLKEYNLPTYAKPIVIREEMDRPQPRLDRDAGNGMSISVGRIREDPVFGI KYTALEHNTIRGAAGASVLNAELYVKKYL >Mature_349_residues MIKVGVLGATGNVGQRFMQMLENHPIFELEVLGASSRSAGKKYADACYWYQTEPIPEEYANKMVQTTDPTDKAYEDVDIV FSALPSDLAKKLEPEFAKEGKLVFSNASAMRMENDVPLMIPEVNYDHFEMLDIQRENRNYDGAIITNPNCSTICAVITLK PIMDKFGIDLVNITTMQAISGAGYNGVPSMAIIDNLVPYIGSEEEKMQTESLKLLGAIDKENNKFTDANFKIGVSCNRVS VIDGHTESIFVKTTEEATPEEIKKVMDKFDPLKEYNLPTYAKPIVIREEMDRPQPRLDRDAGNGMSISVGRIREDPVFGI KYTALEHNTIRGAAGASVLNAELYVKKYL
Specific function: This enzyme catalyzes the second step in the common metabolic pathway to synthesize Thr and Met from Asp [H]
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=373, Percent_Identity=23.5924932975871, Blast_Score=75, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6320362, Length=360, Percent_Identity=46.3888888888889, Blast_Score=296, Evalue=3e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR005676 - InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 38904; Mature: 38904
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVGVLGATGNVGQRFMQMLENHPIFELEVLGASSRSAGKKYADACYWYQTEPIPEEYA CEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHEEEEECCCCCCHHHH NKMVQTTDPTDKAYEDVDIVFSALPSDLAKKLEPEFAKEGKLVFSNASAMRMENDVPLMI CCCEECCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHCCCEEEECCCCEEECCCCCEEE PEVNYDHFEMLDIQRENRNYDGAIITNPNCSTICAVITLKPIMDKFGIDLVNITTMQAIS ECCCCCCEEEEEEECCCCCCCCEEEECCCCHHEEHHHHHHHHHHHHCCEEEEEEHHHHHC GAGYNGVPSMAIIDNLVPYIGSEEEKMQTESLKLLGAIDKENNKFTDANFKIGVSCNRVS CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCEEECCCEEEEEEECEEE VIDGHTESIFVKTTEEATPEEIKKVMDKFDPLKEYNLPTYAKPIVIREEMDRPQPRLDRD EECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEEEHHCCCCCCCCCCC AGNGMSISVGRIREDPVFGIKYTALEHNTIRGAAGASVLNAELYVKKYL CCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHEEHEEEEEECC >Mature Secondary Structure MIKVGVLGATGNVGQRFMQMLENHPIFELEVLGASSRSAGKKYADACYWYQTEPIPEEYA CEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHEEEEECCCCCCHHHH NKMVQTTDPTDKAYEDVDIVFSALPSDLAKKLEPEFAKEGKLVFSNASAMRMENDVPLMI CCCEECCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHCCCEEEECCCCEEECCCCCEEE PEVNYDHFEMLDIQRENRNYDGAIITNPNCSTICAVITLKPIMDKFGIDLVNITTMQAIS ECCCCCCEEEEEEECCCCCCCCEEEECCCCHHEEHHHHHHHHHHHHCCEEEEEEHHHHHC GAGYNGVPSMAIIDNLVPYIGSEEEKMQTESLKLLGAIDKENNKFTDANFKIGVSCNRVS CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCEEECCCEEEEEEECEEE VIDGHTESIFVKTTEEATPEEIKKVMDKFDPLKEYNLPTYAKPIVIREEMDRPQPRLDRD EECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEEEHHCCCCCCCCCCC AGNGMSISVGRIREDPVFGIKYTALEHNTIRGAAGASVLNAELYVKKYL CCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHEEHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]