Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is gltB [C]
Identifier: 150401723
GI number: 150401723
Start: 1361732
End: 1363264
Strand: Direct
Name: gltB [C]
Synonym: Maeo_1301
Alternate gene names: 150401723
Gene position: 1361732-1363264 (Clockwise)
Preceding gene: 150401722
Following gene: 150401724
Centisome position: 86.76
GC content: 38.16
Gene sequence:
>1533_bases ATGATACCTTCGACAGTTCCACCAACCATGAAAGTTGAAGTTGATTATAATAAATGCATGCTTTGCGAGAGATGTGTAAA TGAATGCTCGTGGGGAGTTTATAGGCGAGAAGGTAATAGAATTATAAGCTACTCAAATAGGTGCGGTGCATGTCATAGAT GTGTATCAATGTGCCCAAGAGATGCTATTAATATATCTACCCAATCAATAGATTATAGGCCCCATCCATTATGGACAAAA GAGGCAAGAGAAGACATAATAAATCAATCAAAAACAGGCTGTATTCTTTTAAGCGGTATGGGAAATGCAAAAGAATACCC AATTTATTTTGATAAAATTGTGTTGGATGCCTGTCAAGTTACAAATCCATCAATTGACCCGTTAAGGGAGCCAATGGAAT TAAGGACTTACATAGGTAAAAAACCTAAAAAATTAGAATTTGAAATGGTAGAAGAAGAAGTAGATGGAAAGAAAATTAAA AAACAAAAATTAAAAACAAAAGTTGCTCCAAATATAAAGTTGGAAACTCCAATTATGATAGGACACATGTCTTATGGAGC TCTCTCATTAAATGCCCACCAAGCAATGGCAAGAGCCGTTAAAGAATGTGGAACTTTCATGGGGACCGGAGAAGGAGGGC TTCACAGAAGTATATATCCTTATGCCGATAATGTAATTACCCAGGTTGCATCTGGTAGATTTGGAGTAAATGAGGAATAT CTTTCAAAAGGAGCTGCAATTGAGATAAAAATAGGACAAGGAGCAAAACCAGGAATTGGAGGGCATCTCCCCGGGGAAAA AGTATCTGCTGAGGTTTCATTAACAAGAATGATTCCAGAAGGTAGTGATGCTATTTCACCAGCTCCACACCACGATATTT ATTCAATTGAAGATTTGGCACAGCTTGTAAGAAGTTTAAAAGAAGCTACAAGATGGAAAGTTCCTGTATTTGTGAAAATA TCAGCAGTTCATAATGTTGCAGCTATTGCAAATGGAATAGCTACCAGCGATGCTGATGCCGTAGTAATTGACGGATTTAA GGGAGGAACAGGTGCAGCACCTAAGGTATTTAGAGATAATGTAGGAATACCAATAGAATTGGCTGTTGCAGCAGTTGACC AAAGATTGAGAGAAGAAGGAGTAAGAAACGAAATAAGTATTATAGCAAGTGGAGGGATAAGAAACTCCGCCGATGTATTT AAATTAATAGCTCTTGGTGCAGATGCAACCTATATCGGAACAGCTGTAATGATAGCTATGGGCTGTAGAGTATGTGGTAG ATGTTACACAGGACAATGTGCATGGGGAATAGCCACACAAAAACCAGAGCTCGTAAGTAGGTTGGATGTAGAAGAAGGAG CAAAAAGAGTTGCAAATCTCATAAATGCATGGACACATGAAATACAGGAGCTCCTTGGTGCCGCAGGAATTAATTCTATT GAAAGTTTAAGAGGAAACAGAGATAGGTTAAGAGGAGTAGGGCTAAATAAAACAGAATTAGAAGCACTTGGCATTGAACA TGCTGGAATGTAA
Upstream 100 bases:
>100_bases CCTGTTTTAGCAAGAATTAATAAATAAAGATAAAATAACTAAAATAATATATTAAAATATATTAAATATATTACAATAAT TAACAGTAGGAAGTGATATA
Downstream 100 bases:
>100_bases TCTATAATCATATATTATAAATTACCCAAAATTATGGCGAATCGACAATTAATTAATATCCTTTAAATTTGCAAACTCTT TTAGGGTTTGCCCCTCACCA
Product: glutamate synthase (NADPH)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MIPSTVPPTMKVEVDYNKCMLCERCVNECSWGVYRREGNRIISYSNRCGACHRCVSMCPRDAINISTQSIDYRPHPLWTK EAREDIINQSKTGCILLSGMGNAKEYPIYFDKIVLDACQVTNPSIDPLREPMELRTYIGKKPKKLEFEMVEEEVDGKKIK KQKLKTKVAPNIKLETPIMIGHMSYGALSLNAHQAMARAVKECGTFMGTGEGGLHRSIYPYADNVITQVASGRFGVNEEY LSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSLTRMIPEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKVPVFVKI SAVHNVAAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNVGIPIELAVAAVDQRLREEGVRNEISIIASGGIRNSADVF KLIALGADATYIGTAVMIAMGCRVCGRCYTGQCAWGIATQKPELVSRLDVEEGAKRVANLINAWTHEIQELLGAAGINSI ESLRGNRDRLRGVGLNKTELEALGIEHAGM
Sequences:
>Translated_510_residues MIPSTVPPTMKVEVDYNKCMLCERCVNECSWGVYRREGNRIISYSNRCGACHRCVSMCPRDAINISTQSIDYRPHPLWTK EAREDIINQSKTGCILLSGMGNAKEYPIYFDKIVLDACQVTNPSIDPLREPMELRTYIGKKPKKLEFEMVEEEVDGKKIK KQKLKTKVAPNIKLETPIMIGHMSYGALSLNAHQAMARAVKECGTFMGTGEGGLHRSIYPYADNVITQVASGRFGVNEEY LSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSLTRMIPEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKVPVFVKI SAVHNVAAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNVGIPIELAVAAVDQRLREEGVRNEISIIASGGIRNSADVF KLIALGADATYIGTAVMIAMGCRVCGRCYTGQCAWGIATQKPELVSRLDVEEGAKRVANLINAWTHEIQELLGAAGINSI ESLRGNRDRLRGVGLNKTELEALGIEHAGM >Mature_510_residues MIPSTVPPTMKVEVDYNKCMLCERCVNECSWGVYRREGNRIISYSNRCGACHRCVSMCPRDAINISTQSIDYRPHPLWTK EAREDIINQSKTGCILLSGMGNAKEYPIYFDKIVLDACQVTNPSIDPLREPMELRTYIGKKPKKLEFEMVEEEVDGKKIK KQKLKTKVAPNIKLETPIMIGHMSYGALSLNAHQAMARAVKECGTFMGTGEGGLHRSIYPYADNVITQVASGRFGVNEEY LSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSLTRMIPEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKVPVFVKI SAVHNVAAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNVGIPIELAVAAVDQRLREEGVRNEISIIASGGIRNSADVF KLIALGADATYIGTAVMIAMGCRVCGRCYTGQCAWGIATQKPELVSRLDVEEGAKRVANLINAWTHEIQELLGAAGINSI ESLRGNRDRLRGVGLNKTELEALGIEHAGM
Specific function: NITROGEN METABOLISM, GLUTAMATE BIOSYNTHESIS. THE CATALYZED REACTION BRINGS TOGETHER THE NITROGEN AND CARBON METABOLISM. [C]
COG id: COG0069
COG function: function code E; Glutamate synthase domain 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI308199519, Length=326, Percent_Identity=39.5705521472393, Blast_Score=195, Evalue=5e-51, Organism=Caenorhabditis elegans, GI17570289, Length=332, Percent_Identity=37.6506024096386, Blast_Score=202, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6320030, Length=331, Percent_Identity=36.5558912386707, Blast_Score=204, Evalue=2e-53, Organism=Drosophila melanogaster, GI28574881, Length=332, Percent_Identity=38.5542168674699, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24665539, Length=332, Percent_Identity=38.5542168674699, Blast_Score=199, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013785 - InterPro: IPR002932 [H]
Pfam domain/function: PF01645 Glu_synthase [H]
EC number: =1.4.1.13 [H]
Molecular weight: Translated: 55406; Mature: 55406
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSTVPPTMKVEVDYNKCMLCERCVNECSWGVYRREGNRIISYSNRCGACHRCVSMCPR CCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHCCC DAINISTQSIDYRPHPLWTKEAREDIINQSKTGCILLSGMGNAKEYPIYFDKIVLDACQV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHC TNPSIDPLREPMELRTYIGKKPKKLEFEMVEEEVDGKKIKKQKLKTKVAPNIKLETPIMI CCCCHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCEECCCEEE GHMSYGALSLNAHQAMARAVKECGTFMGTGEGGLHRSIYPYADNVITQVASGRFGVNEEY EECCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH LSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSLTRMIPEGSDAISPAPHHDIYSIEDLA HCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHH QLVRSLKEATRWKVPVFVKISAVHNVAAIANGIATSDADAVVIDGFKGGTGAAPKVFRDN HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHCC VGIPIELAVAAVDQRLREEGVRNEISIIASGGIRNSADVFKLIALGADATYIGTAVMIAM CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GCRVCGRCYTGQCAWGIATQKPELVSRLDVEEGAKRVANLINAWTHEIQELLGAAGINSI HHHHHCCCCCCCEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ESLRGNRDRLRGVGLNKTELEALGIEHAGM HHHCCCHHHHCCCCCCHHHHHHHCCHHCCC >Mature Secondary Structure MIPSTVPPTMKVEVDYNKCMLCERCVNECSWGVYRREGNRIISYSNRCGACHRCVSMCPR CCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHCCC DAINISTQSIDYRPHPLWTKEAREDIINQSKTGCILLSGMGNAKEYPIYFDKIVLDACQV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHC TNPSIDPLREPMELRTYIGKKPKKLEFEMVEEEVDGKKIKKQKLKTKVAPNIKLETPIMI CCCCHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCEECCCEEE GHMSYGALSLNAHQAMARAVKECGTFMGTGEGGLHRSIYPYADNVITQVASGRFGVNEEY EECCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH LSKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSLTRMIPEGSDAISPAPHHDIYSIEDLA HCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHH QLVRSLKEATRWKVPVFVKISAVHNVAAIANGIATSDADAVVIDGFKGGTGAAPKVFRDN HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHCC VGIPIELAVAAVDQRLREEGVRNEISIIASGGIRNSADVFKLIALGADATYIGTAVMIAM CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GCRVCGRCYTGQCAWGIATQKPELVSRLDVEEGAKRVANLINAWTHEIQELLGAAGINSI HHHHHCCCCCCCEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ESLRGNRDRLRGVGLNKTELEALGIEHAGM HHHCCCHHHHCCCCCCHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]