Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401724
Identifier: 150401724
GI number: 150401724
Start: 1363621
End: 1364406
Strand: Direct
Name: 150401724
Synonym: Maeo_1302
Alternate gene names: NA
Gene position: 1363621-1364406 (Clockwise)
Preceding gene: 150401723
Following gene: 150401725
Centisome position: 86.88
GC content: 33.21
Gene sequence:
>786_bases ATGGATAAATCAACAACAGAAGTAGTATTGGACGCCAACAACTTTGAATATAGGGAGTTAAATGAAAAAATCCATACTAT TTTAAATGAATATCCAAATTTAGAAAAACTTATTTTAAAAAATGTTTTGGGTCAAAGATTTATCGGAAATGGAATTCAAA AAGAAATAACAATAGAAATATATGGAGTTCCAGGCGGAGACCTTGGAATGTTCATGAATGGACCAACAATTATAGTTCAT GGAAATGCTGACCACGCACCGGGAAATACTATGGATAGTGGTAAAATTGTAATCCATGGAAGTGGCGGGGATGCCACTGG ACACTCTATGAGAGGAGGAAAACTATTTGTTAGGGACAATGTTGGATATAGAAGTGGAATCCACATGAAAGAATATAAGG AAAAATTCCCGATATTGGTCATAGGCGGAGAAATAAAGGATTTTTTAGGAGAATATATGGCAGGAGGAATTCTTATTGGA CTCAATATGGATAACGAGGGAAATGATTTAGGAAAAATAAATTCAAAAATGCTTGGAACTGGAATTCACGGCGGAAGCAT ATATATTAGGGAGAGCATCGATAAATCCCAATTAGGAGTTGCTGCGGATATTAAAGAATTCACAGACGAAGACAGAGCAA AAATTACGCCATATATTGAAGAATTTTGTAAAGATTTTAATTATAGCGAAGAAATAAAAAATAAGCTTTTGAATTCAAAT TATACAAAAATAGCTCCAATCTCGAAAAGACCATTCGAAAAATTATATACTCCTGATTTAAGATAA
Upstream 100 bases:
>100_bases TCGATAATAGTATATAATTGTCTGTCGATTTGCCATTATAAATATTAATAAATCTATTTATATCTTTTATTTTTACAATT ATAATATTTATGGTGAGATG
Downstream 100 bases:
>100_bases ATAATCAATAAGTATAGATAATAATTAATTATTATAATGATAATATTTAGAAATATTGGTAATAATATCGGTGATTAATA AATATAACTCATAAACATAA
Product: glutamate synthase alpha subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MDKSTTEVVLDANNFEYRELNEKIHTILNEYPNLEKLILKNVLGQRFIGNGIQKEITIEIYGVPGGDLGMFMNGPTIIVH GNADHAPGNTMDSGKIVIHGSGGDATGHSMRGGKLFVRDNVGYRSGIHMKEYKEKFPILVIGGEIKDFLGEYMAGGILIG LNMDNEGNDLGKINSKMLGTGIHGGSIYIRESIDKSQLGVAADIKEFTDEDRAKITPYIEEFCKDFNYSEEIKNKLLNSN YTKIAPISKRPFEKLYTPDLR
Sequences:
>Translated_261_residues MDKSTTEVVLDANNFEYRELNEKIHTILNEYPNLEKLILKNVLGQRFIGNGIQKEITIEIYGVPGGDLGMFMNGPTIIVH GNADHAPGNTMDSGKIVIHGSGGDATGHSMRGGKLFVRDNVGYRSGIHMKEYKEKFPILVIGGEIKDFLGEYMAGGILIG LNMDNEGNDLGKINSKMLGTGIHGGSIYIRESIDKSQLGVAADIKEFTDEDRAKITPYIEEFCKDFNYSEEIKNKLLNSN YTKIAPISKRPFEKLYTPDLR >Mature_261_residues MDKSTTEVVLDANNFEYRELNEKIHTILNEYPNLEKLILKNVLGQRFIGNGIQKEITIEIYGVPGGDLGMFMNGPTIIVH GNADHAPGNTMDSGKIVIHGSGGDATGHSMRGGKLFVRDNVGYRSGIHMKEYKEKFPILVIGGEIKDFLGEYMAGGILIG LNMDNEGNDLGKINSKMLGTGIHGGSIYIRESIDKSQLGVAADIKEFTDEDRAKITPYIEEFCKDFNYSEEIKNKLLNSN YTKIAPISKRPFEKLYTPDLR
Specific function: Unknown
COG id: COG0070
COG function: function code E; Glutamate synthase domain 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fwdC/fmdC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002489 - InterPro: IPR012061 [H]
Pfam domain/function: PF01493 GXGXG [H]
EC number: NA
Molecular weight: Translated: 28994; Mature: 28994
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSTTEVVLDANNFEYRELNEKIHTILNEYPNLEKLILKNVLGQRFIGNGIQKEITIEI CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE YGVPGGDLGMFMNGPTIIVHGNADHAPGNTMDSGKIVIHGSGGDATGHSMRGGKLFVRDN EECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC VGYRSGIHMKEYKEKFPILVIGGEIKDFLGEYMAGGILIGLNMDNEGNDLGKINSKMLGT CCCCCCCCHHHHHHHCCEEEECCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCHHHEEC GIHGGSIYIRESIDKSQLGVAADIKEFTDEDRAKITPYIEEFCKDFNYSEEIKNKLLNSN CCCCCEEEEEECCCHHHCCHHHHHHHHCCCCCCEECHHHHHHHHCCCCHHHHHHHHHCCC YTKIAPISKRPFEKLYTPDLR CCEECCCCCCCHHHHCCCCCC >Mature Secondary Structure MDKSTTEVVLDANNFEYRELNEKIHTILNEYPNLEKLILKNVLGQRFIGNGIQKEITIEI CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE YGVPGGDLGMFMNGPTIIVHGNADHAPGNTMDSGKIVIHGSGGDATGHSMRGGKLFVRDN EECCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC VGYRSGIHMKEYKEKFPILVIGGEIKDFLGEYMAGGILIGLNMDNEGNDLGKINSKMLGT CCCCCCCCHHHHHHHCCEEEECCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCHHHEEC GIHGGSIYIRESIDKSQLGVAADIKEFTDEDRAKITPYIEEFCKDFNYSEEIKNKLLNSN CCCCCEEEEEECCCHHHCCHHHHHHHHCCCCCCEECHHHHHHHHCCCCHHHHHHHHHCCC YTKIAPISKRPFEKLYTPDLR CCEECCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]