Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401675
Identifier: 150401675
GI number: 150401675
Start: 1316812
End: 1317486
Strand: Direct
Name: 150401675
Synonym: Maeo_1253
Alternate gene names: NA
Gene position: 1316812-1317486 (Clockwise)
Preceding gene: 150401673
Following gene: 150401677
Centisome position: 83.9
GC content: 32.44
Gene sequence:
>675_bases ATGAAAATTGCTTCATTATATTCTGGGGGAAAGGATTCGGCTTATGCTCTTTGGTGGGCATTAAATCAAGGCTGGGATGT AAATTATATGGTGAATGTGGTCTCAAAAAATAAGGAGAGCTATATGTTTCATGTTCCAAATGTAGAATTAACCGATTTAG TGGCAGAAAGTGCAAATATATCCATGGTTAAGGTAATAACCGCAGGAGAGAAGGAAAAAGAGATATTGGATTTAAAAAAG ACATTATCAAAATTAGATATTGATGGAATTGTAAGCGGAGCTCTGGCAAGTGAATATCAAAGAACAAGAATAGACCATAT ATGTCAAGAAATTGGTATAAAATCCTTTGCTCCATTATGGCATAAGGAACAGGAATTGATATTGAGGGATACGGCAAAAT TCTTTGATTTTAGGATGGTTAGTGTTGCAGCTTATGGATTGGGAAAGGAATGGCTGGGAAAAAGAATAACTGATGATAAT ATTGATAAATTATTTAAAATAATGGAAAAATATCAAATAAATAAAGCATTTGAAGGGGGAGAGGCTGAAACTTTTGTATT TGATGCCCCATTTTTTGATAAAAAAATAGAAGTTATGGATTATGAAATAATATGGGATGATAGCTGTGAATGTGGTTATT ATAATGTATTGGATGCCAAATTGGTTGAAAAATAA
Upstream 100 bases:
>100_bases TACTATATTTTAATAAACATATGTTTAGTAATATTATATAAAATAATATATACATACCAATGAAAAAATAAAAGAAAAAG AAAATAGAAACGGTGAAATT
Downstream 100 bases:
>100_bases TAATATAGTAAAAATAAATTATTGCTCTTCTTCATGCTCAAAATCATGAACATCCCATACATCAAGGAATTTACATATAC ATTTTTTATTTAGGAGCTCC
Product: putative ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKIASLYSGGKDSAYALWWALNQGWDVNYMVNVVSKNKESYMFHVPNVELTDLVAESANISMVKVITAGEKEKEILDLKK TLSKLDIDGIVSGALASEYQRTRIDHICQEIGIKSFAPLWHKEQELILRDTAKFFDFRMVSVAAYGLGKEWLGKRITDDN IDKLFKIMEKYQINKAFEGGEAETFVFDAPFFDKKIEVMDYEIIWDDSCECGYYNVLDAKLVEK
Sequences:
>Translated_224_residues MKIASLYSGGKDSAYALWWALNQGWDVNYMVNVVSKNKESYMFHVPNVELTDLVAESANISMVKVITAGEKEKEILDLKK TLSKLDIDGIVSGALASEYQRTRIDHICQEIGIKSFAPLWHKEQELILRDTAKFFDFRMVSVAAYGLGKEWLGKRITDDN IDKLFKIMEKYQINKAFEGGEAETFVFDAPFFDKKIEVMDYEIIWDDSCECGYYNVLDAKLVEK >Mature_224_residues MKIASLYSGGKDSAYALWWALNQGWDVNYMVNVVSKNKESYMFHVPNVELTDLVAESANISMVKVITAGEKEKEILDLKK TLSKLDIDGIVSGALASEYQRTRIDHICQEIGIKSFAPLWHKEQELILRDTAKFFDFRMVSVAAYGLGKEWLGKRITDDN IDKLFKIMEKYQINKAFEGGEAETFVFDAPFFDKKIEVMDYEIIWDDSCECGYYNVLDAKLVEK
Specific function: Unknown
COG id: COG2102
COG function: function code R; Predicted ATPases of PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI18087809, Length=228, Percent_Identity=31.140350877193, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI86561065, Length=228, Percent_Identity=28.9473684210526, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323172, Length=239, Percent_Identity=29.2887029288703, Blast_Score=95, Evalue=8e-21, Organism=Drosophila melanogaster, GI85726382, Length=250, Percent_Identity=28.4, Blast_Score=101, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005237 - InterPro: IPR022427 - InterPro: IPR002761 - InterPro: IPR014729 [H]
Pfam domain/function: PF01902 ATP_bind_4 [H]
EC number: NA
Molecular weight: Translated: 25688; Mature: 25688
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIASLYSGGKDSAYALWWALNQGWDVNYMVNVVSKNKESYMFHVPNVELTDLVAESANI CCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCCCC SMVKVITAGEKEKEILDLKKTLSKLDIDGIVSGALASEYQRTRIDHICQEIGIKSFAPLW EEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC HKEQELILRDTAKFFDFRMVSVAAYGLGKEWLGKRITDDNIDKLFKIMEKYQINKAFEGG CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC EAETFVFDAPFFDKKIEVMDYEIIWDDSCECGYYNVLDAKLVEK CCCEEEEECCCCCCEEEEEEEEEEECCCCCCCEEECHHHHHHCC >Mature Secondary Structure MKIASLYSGGKDSAYALWWALNQGWDVNYMVNVVSKNKESYMFHVPNVELTDLVAESANI CCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHCCCCC SMVKVITAGEKEKEILDLKKTLSKLDIDGIVSGALASEYQRTRIDHICQEIGIKSFAPLW EEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC HKEQELILRDTAKFFDFRMVSVAAYGLGKEWLGKRITDDNIDKLFKIMEKYQINKAFEGG CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC EAETFVFDAPFFDKKIEVMDYEIIWDDSCECGYYNVLDAKLVEK CCCEEEEECCCCCCEEEEEEEEEEECCCCCCCEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]