Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is hisA [C]
Identifier: 150401640
GI number: 150401640
Start: 1288534
End: 1289211
Strand: Direct
Name: hisA [C]
Synonym: Maeo_1218
Alternate gene names: 150401640
Gene position: 1288534-1289211 (Clockwise)
Preceding gene: 150401639
Following gene: 150401641
Centisome position: 82.1
GC content: 25.66
Gene sequence:
>678_bases ATGGAGATAATCCCTGTAATTGATATTATGGATAACATGGCAGTTCACGGAAAAAGTGGGGACCGAGATAACTACAAACC ATTGAAATCTGTTTTATGCAATTCTTCAAATCCTGCGGATATAATAAATACATATAAAGAAAATGGGGCAAAAAAGGTAT ATATTGCCGACTTAGATGCCATAATGGAAAATGGAAATAATTTTGAATGTATTAAAGAATTAGATATCTATAAAATTGTA GATTGTGGCATAAAAAATAAAAAAGATATACAAAATTTAGAAAAATTAAATTTTTGTAATAAATTAATAGTTGGGACCGA AACTCTTGATGATTTGAGTATATTAAATAATGAAAATATTATTTTAAGTCTTGATTATAAAGACGGAAAATTATTAAATT ATGAATTGGAGGAAATATTAAATAATATACAGCATAATACTTCTTTAATATTATTGGATATATCTTCCGTAGGCACTCAA AAAGGAATTAATATAGAATTAATAAAAGAAATAATACAGAAAAAGAAAGCAACAAATCCCCTATATATCGGAGGAGGAAT AAAAGACGAAAACGACTTAATGGAAGCATATAGTTTAAATGTAGATGGTGTTTTAATAGCCACTTCAATTCATAATGGAA CGCTAAATTTAAAAGAAATAATTGAAAAATATAAATAA
Upstream 100 bases:
>100_bases TATTATATAATTAATTATTTTATTATATTGATATTATTTTATTGGCAAATTAAAGATATGAGGCAAATAAAACCATAAAA AAGGATATAAATGTGATACT
Downstream 100 bases:
>100_bases ATTGGTGATAATTTGGACAATACACTAAGAAGAATTGATATAATAAAAATATTAATGGAATATGTGAAAGATGAATTAAT AATAAGCAATATAGGATTTC
Product: hisA/hisF family protein
Products: 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-; $phosphoribosyl)imidazole-4-carboxamide
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MEIIPVIDIMDNMAVHGKSGDRDNYKPLKSVLCNSSNPADIINTYKENGAKKVYIADLDAIMENGNNFECIKELDIYKIV DCGIKNKKDIQNLEKLNFCNKLIVGTETLDDLSILNNENIILSLDYKDGKLLNYELEEILNNIQHNTSLILLDISSVGTQ KGINIELIKEIIQKKKATNPLYIGGGIKDENDLMEAYSLNVDGVLIATSIHNGTLNLKEIIEKYK
Sequences:
>Translated_225_residues MEIIPVIDIMDNMAVHGKSGDRDNYKPLKSVLCNSSNPADIINTYKENGAKKVYIADLDAIMENGNNFECIKELDIYKIV DCGIKNKKDIQNLEKLNFCNKLIVGTETLDDLSILNNENIILSLDYKDGKLLNYELEEILNNIQHNTSLILLDISSVGTQ KGINIELIKEIIQKKKATNPLYIGGGIKDENDLMEAYSLNVDGVLIATSIHNGTLNLKEIIEKYK >Mature_225_residues MEIIPVIDIMDNMAVHGKSGDRDNYKPLKSVLCNSSNPADIINTYKENGAKKVYIADLDAIMENGNNFECIKELDIYKIV DCGIKNKKDIQNLEKLNFCNKLIVGTETLDDLSILNNENIILSLDYKDGKLLNYELEEILNNIQHNTSLILLDISSVGTQ KGINIELIKEIIQKKKATNPLYIGGGIKDENDLMEAYSLNVDGVLIATSIHNGTLNLKEIIEKYK
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG1411
COG function: function code R; Uncharacterized protein related to proFAR isomerase (HisA)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR004650 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: 5.3.1.16
Molecular weight: Translated: 25217; Mature: 25217
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIPVIDIMDNMAVHGKSGDRDNYKPLKSVLCNSSNPADIINTYKENGAKKVYIADLDA CCCEEHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEHHH IMENGNNFECIKELDIYKIVDCGIKNKKDIQNLEKLNFCNKLIVGTETLDDLSILNNENI HHHCCCCEEEHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCE ILSLDYKDGKLLNYELEEILNNIQHNTSLILLDISSVGTQKGINIELIKEIIQKKKATNP EEEEECCCCCEECHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC LYIGGGIKDENDLMEAYSLNVDGVLIATSIHNGTLNLKEIIEKYK EEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHCC >Mature Secondary Structure MEIIPVIDIMDNMAVHGKSGDRDNYKPLKSVLCNSSNPADIINTYKENGAKKVYIADLDA CCCEEHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEHHH IMENGNNFECIKELDIYKIVDCGIKNKKDIQNLEKLNFCNKLIVGTETLDDLSILNNENI HHHCCCCEEEHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCE ILSLDYKDGKLLNYELEEILNNIQHNTSLILLDISSVGTQKGINIELIKEIIQKKKATNP EEEEECCCCCEECHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC LYIGGGIKDENDLMEAYSLNVDGVLIATSIHNGTLNLKEIIEKYK EEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 1-(5-phosphoribosyl)-5-[(5-; $phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
Specific reaction: 1-(5-phosphoribosyl)-5-[(5- $phosphoribosylamino)methylideneamino]imidazole-4-carboxamide = 5- $[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5- $phosphoribosyl)imidazole-4-carboxamide
General reaction: Isomerases; Intramolecular Oxidoreductases; Interconverting Aldoses and Ketoses [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]