Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401616
Identifier: 150401616
GI number: 150401616
Start: 1260190
End: 1260663
Strand: Direct
Name: 150401616
Synonym: Maeo_1193
Alternate gene names: NA
Gene position: 1260190-1260663 (Clockwise)
Preceding gene: 150401615
Following gene: 150401617
Centisome position: 80.29
GC content: 27.85
Gene sequence:
>474_bases ATGGAAAATTCAAATTCAACAACTGGATTAAAAATACAATTAAAATCAAAAATAAAACCAACAGAAGATAGAGAAAAAGT AATAAAAGCTATGAAAAACATATTTACTGATGCAGAAATTGTAGTCCCCGAAACAGACAAAATATATATTACAGTAGAGG GAGAAGCAAAAAATATTGAAAGATTTAAAGAATTGATTAGAAGTCAGGCAATACTCGACACAGCCCGAAGTGTGCTCGAA AAAGGTTCAAAAGGAAACTACACAAAATTTAAAATAAACAAACAAGCAGCATATTCGGAAGTAGTTAATTTTGATAAAGA CATACATGGCGGAATTTATGTAAAAATAATATGTTCCGATGAAGACGAACTAATAAAAGCAATAAAAGACATAGCTCCAA GAACGAAATATGGAAAAATAATAAATGAAGACGAAGAAATTGAAAATGAATATGAAAATAAAAATAAAAAATAG
Upstream 100 bases:
>100_bases TATGAGGATATAGAAAAAGCGTTGGAAATAATAAATAATTTATTTGAATAATATGTCTATATAATCTTAAATAATATTAT TAAATATGCTGGTGCGTTAA
Downstream 100 bases:
>100_bases ATAGGGCAATAACTTTTTTTATTTATTTTATTATTTTATAGTTTATTTTATTATGATAAATCGACGGACATTTGATATTA TAGTAAGTTCAATAACTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MENSNSTTGLKIQLKSKIKPTEDREKVIKAMKNIFTDAEIVVPETDKIYITVEGEAKNIERFKELIRSQAILDTARSVLE KGSKGNYTKFKINKQAAYSEVVNFDKDIHGGIYVKIICSDEDELIKAIKDIAPRTKYGKIINEDEEIENEYENKNKK
Sequences:
>Translated_157_residues MENSNSTTGLKIQLKSKIKPTEDREKVIKAMKNIFTDAEIVVPETDKIYITVEGEAKNIERFKELIRSQAILDTARSVLE KGSKGNYTKFKINKQAAYSEVVNFDKDIHGGIYVKIICSDEDELIKAIKDIAPRTKYGKIINEDEEIENEYENKNKK >Mature_157_residues MENSNSTTGLKIQLKSKIKPTEDREKVIKAMKNIFTDAEIVVPETDKIYITVEGEAKNIERFKELIRSQAILDTARSVLE KGSKGNYTKFKINKQAAYSEVVNFDKDIHGGIYVKIICSDEDELIKAIKDIAPRTKYGKIINEDEEIENEYENKNKK
Specific function: Unknown
COG id: COG1931
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0201 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022803 - InterPro: IPR002739 [H]
Pfam domain/function: PF01877 DUF54 [H]
EC number: NA
Molecular weight: Translated: 17975; Mature: 17975
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSNSTTGLKIQLKSKIKPTEDREKVIKAMKNIFTDAEIVVPETDKIYITVEGEAKNIE CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCHHHHH RFKELIRSQAILDTARSVLEKGSKGNYTKFKINKQAAYSEVVNFDKDIHGGIYVKIICSD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCEEEEEEECC EDELIKAIKDIAPRTKYGKIINEDEEIENEYENKNKK HHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MENSNSTTGLKIQLKSKIKPTEDREKVIKAMKNIFTDAEIVVPETDKIYITVEGEAKNIE CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCHHHHH RFKELIRSQAILDTARSVLEKGSKGNYTKFKINKQAAYSEVVNFDKDIHGGIYVKIICSD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCEEEEEEECC EDELIKAIKDIAPRTKYGKIINEDEEIENEYENKNKK HHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]