Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401617
Identifier: 150401617
GI number: 150401617
Start: 1260933
End: 1262072
Strand: Direct
Name: 150401617
Synonym: Maeo_1194
Alternate gene names: NA
Gene position: 1260933-1262072 (Clockwise)
Preceding gene: 150401616
Following gene: 150401618
Centisome position: 80.34
GC content: 30.61
Gene sequence:
>1140_bases ATGAACAATAAAAACAAAATTAGAAGGGTTCCAGCAAAGAAAATAGCCCACAAAATAATTAACGAATGTGATGTTATTTT AATGGTTGTAGATGGGAGAAATCCAGAAGGAACAAGAAACATGCAATTAGAGGAAAGAATAAAAAAAGAAGATAAAAAAA TGATTTTAGTATTAAATAAAGCTGATTTAGTTCCAAAGCATGTAATTGAAAAATGGAGCTCCAAGTTTAAACAAGAAAAT CCAAATACTAAAACAGTATTTGTGAGTTCTACAAACAAAAAGGGGACAAAAATATTGAGAGATGATATAAAATACTATCT TCAAATAAACAAAATAAATGAGGGAAAAGTTGGGGTAGTAGGATATCCAAATGTTGGAAAATCTTCTTTAATAAATGCTT TAACAGGTAAAACAAGTGCTTTAAGTGGATTAACTGCAGGACTTACCAAGGGGGAGCAATGGATAAAACTTACAAAGAAA ATAAAATTATTGGATACTCCGGGAGTAATTGAGCCAAAAGATGAAGATGAGCTTGTAATGATTGGAGCAATTAGATATGA GAAAATAGAGAATCCAGTAGACCCAGCAATAAAAATATTAAAATTATTGGGTTCATTTGATATGGATATAGTAAGAAAAT ACTGTGGCGACACCATTGAAATAAATGATGTAGAAGAAATAAACGAGAAGCTTATAGAAAAAATAGGTAAAAAATTCAAT TTCCTTGGAAAGAATGGTATAATTGATATGAAAAGAACCGCAAAATACATAATAAAAGATTATCAAGGTGGAAAATTAAA TTATTATGAGGTTAAGAAAAAAAGTAGGGAACAAATAAGATCTACAAATATAGGATTTATTACAAAACATTTGAAAGATT TCTTATTTATTGATGACGCAAATGCCGTAGTGTCCCATTTATCAGATATTAGTGAATTATCTGATGTGAAAGTTAGAAAG CCCATAATCGGCTCAAAGAAAATTGATGACGCCACAGTTATAATATCTTTTGGGGAAAAAACAGCAAATGCAGGTAGAAA AAAGGTGGAGGAAAAGGCAAAAACAGACGGAATAACATTGTATTCCCAAGGTGGCGGACGATGTGGGAAAAATAGAATAT TTATAGGAGTTGGCGAATAG
Upstream 100 bases:
>100_bases TTAGATGAAAATGTCCGAAGATTGGCTATAAATATATCTCTGTTATTTTACCATATTTTTTAATACTTACTTTTATATAT TCAATTTACACGGTGATTTA
Downstream 100 bases:
>100_bases CCGTGGTAACGCATATGGAGTTATAATTATATGGAGCTCCCTAAAAATTATAGAACAAACTTCTGAATATACTATAAAAA TAGAAACTTATTTATTTTAA
Product: GTP-binding protein HSR1-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNNKNKIRRVPAKKIAHKIINECDVILMVVDGRNPEGTRNMQLEERIKKEDKKMILVLNKADLVPKHVIEKWSSKFKQEN PNTKTVFVSSTNKKGTKILRDDIKYYLQINKINEGKVGVVGYPNVGKSSLINALTGKTSALSGLTAGLTKGEQWIKLTKK IKLLDTPGVIEPKDEDELVMIGAIRYEKIENPVDPAIKILKLLGSFDMDIVRKYCGDTIEINDVEEINEKLIEKIGKKFN FLGKNGIIDMKRTAKYIIKDYQGGKLNYYEVKKKSREQIRSTNIGFITKHLKDFLFIDDANAVVSHLSDISELSDVKVRK PIIGSKKIDDATVIISFGEKTANAGRKKVEEKAKTDGITLYSQGGGRCGKNRIFIGVGE
Sequences:
>Translated_379_residues MNNKNKIRRVPAKKIAHKIINECDVILMVVDGRNPEGTRNMQLEERIKKEDKKMILVLNKADLVPKHVIEKWSSKFKQEN PNTKTVFVSSTNKKGTKILRDDIKYYLQINKINEGKVGVVGYPNVGKSSLINALTGKTSALSGLTAGLTKGEQWIKLTKK IKLLDTPGVIEPKDEDELVMIGAIRYEKIENPVDPAIKILKLLGSFDMDIVRKYCGDTIEINDVEEINEKLIEKIGKKFN FLGKNGIIDMKRTAKYIIKDYQGGKLNYYEVKKKSREQIRSTNIGFITKHLKDFLFIDDANAVVSHLSDISELSDVKVRK PIIGSKKIDDATVIISFGEKTANAGRKKVEEKAKTDGITLYSQGGGRCGKNRIFIGVGE >Mature_379_residues MNNKNKIRRVPAKKIAHKIINECDVILMVVDGRNPEGTRNMQLEERIKKEDKKMILVLNKADLVPKHVIEKWSSKFKQEN PNTKTVFVSSTNKKGTKILRDDIKYYLQINKINEGKVGVVGYPNVGKSSLINALTGKTSALSGLTAGLTKGEQWIKLTKK IKLLDTPGVIEPKDEDELVMIGAIRYEKIENPVDPAIKILKLLGSFDMDIVRKYCGDTIEINDVEEINEKLIEKIGKKFN FLGKNGIIDMKRTAKYIIKDYQGGKLNYYEVKKKSREQIRSTNIGFITKHLKDFLFIDDANAVVSHLSDISELSDVKVRK PIIGSKKIDDATVIISFGEKTANAGRKKVEEKAKTDGITLYSQGGGRCGKNRIFIGVGE
Specific function: Unknown
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI7019419, Length=261, Percent_Identity=34.4827586206897, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI296317324, Length=281, Percent_Identity=31.6725978647687, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI9506611, Length=281, Percent_Identity=31.6725978647687, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI45643129, Length=281, Percent_Identity=29.1814946619217, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI45643127, Length=281, Percent_Identity=29.1814946619217, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI45593130, Length=281, Percent_Identity=29.1814946619217, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI223029424, Length=173, Percent_Identity=30.635838150289, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17534827, Length=279, Percent_Identity=31.8996415770609, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI32563985, Length=262, Percent_Identity=34.7328244274809, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71990926, Length=262, Percent_Identity=34.7328244274809, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI32563983, Length=262, Percent_Identity=34.7328244274809, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25143545, Length=307, Percent_Identity=25.4071661237785, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI115535155, Length=307, Percent_Identity=25.4071661237785, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71982363, Length=214, Percent_Identity=26.6355140186916, Blast_Score=79, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6320842, Length=283, Percent_Identity=31.8021201413428, Blast_Score=132, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6324381, Length=259, Percent_Identity=33.976833976834, Blast_Score=126, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6321339, Length=160, Percent_Identity=31.25, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI19922460, Length=264, Percent_Identity=37.1212121212121, Blast_Score=138, Evalue=8e-33, Organism=Drosophila melanogaster, GI28572990, Length=391, Percent_Identity=28.1329923273657, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI18543229, Length=162, Percent_Identity=32.7160493827161, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023179 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR000795 [H]
Pfam domain/function: PF00009 GTP_EFTU; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 42580; Mature: 42580
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKNKIRRVPAKKIAHKIINECDVILMVVDGRNPEGTRNMQLEERIKKEDKKMILVLNK CCCCHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEC ADLVPKHVIEKWSSKFKQENPNTKTVFVSSTNKKGTKILRDDIKYYLQINKINEGKVGVV CCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHEEEEEEEECCCCEEEE GYPNVGKSSLINALTGKTSALSGLTAGLTKGEQWIKLTKKIKLLDTPGVIEPKDEDELVM ECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCCCCCCCEEE IGAIRYEKIENPVDPAIKILKLLGSFDMDIVRKYCGDTIEINDVEEINEKLIEKIGKKFN EEEEEHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHC FLGKNGIIDMKRTAKYIIKDYQGGKLNYYEVKKKSREQIRSTNIGFITKHLKDFLFIDDA CCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCH NAVVSHLSDISELSDVKVRKPIIGSKKIDDATVIISFGEKTANAGRKKVEEKAKTDGITL HHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEE YSQGGGRCGKNRIFIGVGE EECCCCCCCCCEEEEEECC >Mature Secondary Structure MNNKNKIRRVPAKKIAHKIINECDVILMVVDGRNPEGTRNMQLEERIKKEDKKMILVLNK CCCCHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEC ADLVPKHVIEKWSSKFKQENPNTKTVFVSSTNKKGTKILRDDIKYYLQINKINEGKVGVV CCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHEEEEEEEECCCCEEEE GYPNVGKSSLINALTGKTSALSGLTAGLTKGEQWIKLTKKIKLLDTPGVIEPKDEDELVM ECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCCCCCCCEEE IGAIRYEKIENPVDPAIKILKLLGSFDMDIVRKYCGDTIEINDVEEINEKLIEKIGKKFN EEEEEHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHC FLGKNGIIDMKRTAKYIIKDYQGGKLNYYEVKKKSREQIRSTNIGFITKHLKDFLFIDDA CCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCH NAVVSHLSDISELSDVKVRKPIIGSKKIDDATVIISFGEKTANAGRKKVEEKAKTDGITL HHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEE YSQGGGRCGKNRIFIGVGE EECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]