Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401587
Identifier: 150401587
GI number: 150401587
Start: 1221404
End: 1222492
Strand: Direct
Name: 150401587
Synonym: Maeo_1164
Alternate gene names: NA
Gene position: 1221404-1222492 (Clockwise)
Preceding gene: 150401586
Following gene: 150401588
Centisome position: 77.82
GC content: 32.51
Gene sequence:
>1089_bases ATGAAATTTGGATGGATAATGGCAAATGATGAGGATTGGGAAGAAAGAAAAGAAACAGTAAAAGATTCCCTTGAAAGTTC AATACCTGCTGTGATGGTTTATGAAGAAGATATTGAAAAAGTTAAAGAATTAGGAAATATTAAAACAATATCTAAAAATC CAAATTCTGACATCGTAGTAATCGATAAAGGCGACGATTTAACTATTTTATTTGATGCAAAAAAAGAAGGAAAGGAAACT GGCGTATTTATCTCTATCGAATGTAAAGAGGATGAGGAATACGCATCAGAGGTAAGTAGATACGATTATGTGGATTACAT AATATTAGAGGGAAAAGATTGGAATATTATCCCATTGGAAAATTTAATTGCTGATTTATTTGATGAAAATATAAAAATAG TTTCATTGGCAAAAGATATAAATGATGCAAGAACAGCTTATGAAATACTTGAAAGGGGAGTTGATGGAGTTCTTTATGTC CCAAAAGATATAAATGATGTAAAAGACTTTGCAACATTAATTGAAAAAATGAATTCTGAAAAGTTGGATTTAGATTGTGC TACAATTACGAAAGTTGAGGCTATTGGAAGTGGGGATAGAGTTTGTATAGATACATGCTCAATGATGGAAATGGGAGAAG GTATGCTCATAGGCTCATATTCTAGGGCTTTATTTTTGGTGCATGCTGAAACTGTGGAAAATCCTTATGTTGCCACACGA CCATTTAGAGTAAATGCAGGTCCTGTTCATGCCTATGTATTATGCACTGGAAACAAAACAAGATATTTAAGTGAATTAAA AGCTGGCGATGGGATATTGATTGTAGATAAAGATGGAATGACAAGAGAGGGAATTGTAGGCAGAGTAAAAATAGAAAAAA GACCTTTGATGTTAATTGAAGCTGAATATGTGGGGGGGGAAATTGTAAGAACCATAGTACAAAATGCTGAAACAATCAGA TTGGTTAATGAAAATGGAGCTCCTATATCTGTGGTAGATTTGAAGGTGGGCGATAAAGTAAAATTAAAAATAGATACTAA TGCTAGACATTTTGGAATGGCTATACAAGAAACAATAATTGAAAAATAA
Upstream 100 bases:
>100_bases AAATCAATAAAAATAAAATACTAAATAATATATAATTATAATTAATTTAAAAATATAAAAGATATAATATAAATAAAATT ATTAATAAAAAGGTGATTTT
Downstream 100 bases:
>100_bases ATATTTAGTGTATGAGGAACAAAAATGTTTGGAAAAGTTGAAGAAAAATTAAATAATGTATTAAAAACAGAGGGAGCTCT CTATTTTATACTCATAGACC
Product: 3-dehydroquinate synthase
Products: NA
Alternate protein names: DHQ synthase
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKFGWIMANDEDWEERKETVKDSLESSIPAVMVYEEDIEKVKELGNIKTISKNPNSDIVVIDKGDDLTILFDAKKEGKET GVFISIECKEDEEYASEVSRYDYVDYIILEGKDWNIIPLENLIADLFDENIKIVSLAKDINDARTAYEILERGVDGVLYV PKDINDVKDFATLIEKMNSEKLDLDCATITKVEAIGSGDRVCIDTCSMMEMGEGMLIGSYSRALFLVHAETVENPYVATR PFRVNAGPVHAYVLCTGNKTRYLSELKAGDGILIVDKDGMTREGIVGRVKIEKRPLMLIEAEYVGGEIVRTIVQNAETIR LVNENGAPISVVDLKVGDKVKLKIDTNARHFGMAIQETIIEK
Sequences:
>Translated_362_residues MKFGWIMANDEDWEERKETVKDSLESSIPAVMVYEEDIEKVKELGNIKTISKNPNSDIVVIDKGDDLTILFDAKKEGKET GVFISIECKEDEEYASEVSRYDYVDYIILEGKDWNIIPLENLIADLFDENIKIVSLAKDINDARTAYEILERGVDGVLYV PKDINDVKDFATLIEKMNSEKLDLDCATITKVEAIGSGDRVCIDTCSMMEMGEGMLIGSYSRALFLVHAETVENPYVATR PFRVNAGPVHAYVLCTGNKTRYLSELKAGDGILIVDKDGMTREGIVGRVKIEKRPLMLIEAEYVGGEIVRTIVQNAETIR LVNENGAPISVVDLKVGDKVKLKIDTNARHFGMAIQETIIEK >Mature_362_residues MKFGWIMANDEDWEERKETVKDSLESSIPAVMVYEEDIEKVKELGNIKTISKNPNSDIVVIDKGDDLTILFDAKKEGKET GVFISIECKEDEEYASEVSRYDYVDYIILEGKDWNIIPLENLIADLFDENIKIVSLAKDINDARTAYEILERGVDGVLYV PKDINDVKDFATLIEKMNSEKLDLDCATITKVEAIGSGDRVCIDTCSMMEMGEGMLIGSYSRALFLVHAETVENPYVATR PFRVNAGPVHAYVLCTGNKTRYLSELKAGDGILIVDKDGMTREGIVGRVKIEKRPLMLIEAEYVGGEIVRTIVQNAETIR LVNENGAPISVVDLKVGDKVKLKIDTNARHFGMAIQETIIEK
Specific function: Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis
COG id: COG1465
COG function: function code E; Predicted alternative 3-dehydroquinate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal-type DHQ synthase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DHQS_META3 (A6UW69)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325353.1 - STRING: A6UW69 - GeneID: 5327715 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1164 - eggNOG: arNOG05006 - HOGENOM: HBG670179 - OMA: DRVCIDT - ProtClustDB: PRK02290 - BioCyc: MAEO419665:MAEO_1164-MONOMER - HAMAP: MF_01244 - InterPro: IPR002812 - PIRSF: PIRSF006655 - ProDom: PD017907
Pfam domain/function: PF01959 DHQS
EC number: NA
Molecular weight: Translated: 40532; Mature: 40532
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFGWIMANDEDWEERKETVKDSLESSIPAVMVYEEDIEKVKELGNIKTISKNPNSDIVV CCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEEEECCCCCCCEEE IDKGDDLTILFDAKKEGKETGVFISIECKEDEEYASEVSRYDYVDYIILEGKDWNIIPLE EECCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCEEEHH NLIADLFDENIKIVSLAKDINDARTAYEILERGVDGVLYVPKDINDVKDFATLIEKMNSE HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCC KLDLDCATITKVEAIGSGDRVCIDTCSMMEMGEGMLIGSYSRALFLVHAETVENPYVATR CEECCHHHEEEEEECCCCCEEEEECHHHHHCCCCEEEECCCEEEEEEEECCCCCCEEEEC PFRVNAGPVHAYVLCTGNKTRYLSELKAGDGILIVDKDGMTREGIVGRVKIEKRPLMLIE CEEECCCCEEEEEEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEE AEYVGGEIVRTIVQNAETIRLVNENGAPISVVDLKVGDKVKLKIDTNARHFGMAIQETII EHHCCHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHH EK CC >Mature Secondary Structure MKFGWIMANDEDWEERKETVKDSLESSIPAVMVYEEDIEKVKELGNIKTISKNPNSDIVV CCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEEEECCCCCCCEEE IDKGDDLTILFDAKKEGKETGVFISIECKEDEEYASEVSRYDYVDYIILEGKDWNIIPLE EECCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCEEEHH NLIADLFDENIKIVSLAKDINDARTAYEILERGVDGVLYVPKDINDVKDFATLIEKMNSE HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCC KLDLDCATITKVEAIGSGDRVCIDTCSMMEMGEGMLIGSYSRALFLVHAETVENPYVATR CEECCHHHEEEEEECCCCCEEEEECHHHHHCCCCEEEECCCEEEEEEEECCCCCCEEEEC PFRVNAGPVHAYVLCTGNKTRYLSELKAGDGILIVDKDGMTREGIVGRVKIEKRPLMLIE CEEECCCCEEEEEEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEE AEYVGGEIVRTIVQNAETIRLVNENGAPISVVDLKVGDKVKLKIDTNARHFGMAIQETII EHHCCHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHH EK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA