Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is phi [H]
Identifier: 150401586
GI number: 150401586
Start: 1220698
End: 1221282
Strand: Direct
Name: phi [H]
Synonym: Maeo_1163
Alternate gene names: 150401586
Gene position: 1220698-1221282 (Clockwise)
Preceding gene: 150401583
Following gene: 150401587
Centisome position: 77.78
GC content: 27.01
Gene sequence:
>585_bases TTGAATACCAAACCAATAAAGGAACTTATAAAAAAACTAGAATTATTCTACAAACAGGCACCAACTAATTCGGATTTACT ATTAAATAATATAATTAATACAAAGTCCGAAAGCTCGAAAATATATATATATGGTATTGGGCGAAGTGGTTTTGTTGGAA AGGCATTTGCTATGAGATTGATGCACTTGGGATTTAAATCCCATTTTATCGGTGAAGCAACATGTCCAGCAGTATCCAAC AACGATTTATTAATCGTAGTGTCAGGAAGTGGGGAAACATATTCAATTGTTAATTTATTAAATAAAATAAATAAAATAAA TAATAAATTGGAGTTAAAAGGCAAAAATAAAATAAAAATAATATCCATAACACACAATAATAATTGCACTTTAAAAGAAT TATCGGATTTCATTGTAAATTTAGCTATTGACGAAAGTGATAAAACGGAAAATAAATGTTTTCCCATGGGGACCCTATTT GAAGAAATTGCCTTTATTTATTTGGATACCATAATATACAATTTAATGGAAAAATTAAATATCTCTGAAGAAGATATGAA AAAAAGACATTGTAATTTTTTATAG
Upstream 100 bases:
>100_bases TGTTTTTTATATATTGTTTTTATTGTTATATTTTTATATGGTTGTTAATATACACATAATAAATATGCAGTGTAATATTA TATTATTTTTGGTGATTAAA
Downstream 100 bases:
>100_bases GAAAACCTATTTTATAGAATAAAATCAATAAAAATAAAATACTAAATAATATATAATTATAATTAATTTAAAAATATAAA AGATATAATATAAATAAAAT
Product: sugar isomerase (SIS)
Products: NA
Alternate protein names: 6-phospho-3-hexuloisomerase; PHI [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNTKPIKELIKKLELFYKQAPTNSDLLLNNIINTKSESSKIYIYGIGRSGFVGKAFAMRLMHLGFKSHFIGEATCPAVSN NDLLIVVSGSGETYSIVNLLNKINKINNKLELKGKNKIKIISITHNNNCTLKELSDFIVNLAIDESDKTENKCFPMGTLF EEIAFIYLDTIIYNLMEKLNISEEDMKKRHCNFL
Sequences:
>Translated_194_residues MNTKPIKELIKKLELFYKQAPTNSDLLLNNIINTKSESSKIYIYGIGRSGFVGKAFAMRLMHLGFKSHFIGEATCPAVSN NDLLIVVSGSGETYSIVNLLNKINKINNKLELKGKNKIKIISITHNNNCTLKELSDFIVNLAIDESDKTENKCFPMGTLF EEIAFIYLDTIIYNLMEKLNISEEDMKKRHCNFL >Mature_194_residues MNTKPIKELIKKLELFYKQAPTNSDLLLNNIINTKSESSKIYIYGIGRSGFVGKAFAMRLMHLGFKSHFIGEATCPAVSN NDLLIVVSGSGETYSIVNLLNKINKINNKLELKGKNKIKIISITHNNNCTLKELSDFIVNLAIDESDKTENKCFPMGTLF EEIAFIYLDTIIYNLMEKLNISEEDMKKRHCNFL
Specific function: Catalyzes the isomerization between 3-hexulose 6- phosphate and fructose 6-phosphate [H]
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017552 - InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: =5.3.1.27 [H]
Molecular weight: Translated: 22017; Mature: 22017
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKPIKELIKKLELFYKQAPTNSDLLLNNIINTKSESSKIYIYGIGRSGFVGKAFAMRL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHH MHLGFKSHFIGEATCPAVSNNDLLIVVSGSGETYSIVNLLNKINKINNKLELKGKNKIKI HHHCHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCEEEE ISITHNNNCTLKELSDFIVNLAIDESDKTENKCFPMGTLFEEIAFIYLDTIIYNLMEKLN EEEEECCCCCHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ISEEDMKKRHCNFL CCHHHHHHHCCCCC >Mature Secondary Structure MNTKPIKELIKKLELFYKQAPTNSDLLLNNIINTKSESSKIYIYGIGRSGFVGKAFAMRL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHH MHLGFKSHFIGEATCPAVSNNDLLIVVSGSGETYSIVNLLNKINKINNKLELKGKNKIKI HHHCHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCEEEE ISITHNNNCTLKELSDFIVNLAIDESDKTENKCFPMGTLFEEIAFIYLDTIIYNLMEKLN EEEEECCCCCHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ISEEDMKKRHCNFL CCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]