Definition | Methanococcus aeolicus Nankai-3, complete genome. |
---|---|
Accession | NC_009635 |
Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is gatE [H]
Identifier: 150401555
GI number: 150401555
Start: 1175535
End: 1177457
Strand: Direct
Name: gatE [H]
Synonym: Maeo_1132
Alternate gene names: 150401555
Gene position: 1175535-1177457 (Clockwise)
Preceding gene: 150401548
Following gene: 150401556
Centisome position: 74.9
GC content: 33.49
Gene sequence:
>1923_bases ATGATAAATATGGAATTAAATTACAATGAATTAGGATTAAAAGTAGGATTAGAAATACACCAACAATTAAACACCAAAAG AAAACTTTTTTGTAATTGTCCCACATTAATACGAGAGGACAGCCCAGACGGAGAAATACAACGAACATTACGAACATCCC AGAGCGAAATGGGAGAAATTGATAAAGCCGCACTTATTGAATCCAAAAAAGGCAAAAAAAATATTTACCAATATTATAAT GATACAACCTGTCTTGTGGAATTGGACGAAGAACCTCCACATGCTCCCTCAGAAGAAGCCATAAAAACAGCCTTGGAAGT ATCTTATTTAATGAATATGGAGGCAGTTAATGAAATACAGACAATGAGAAAAATAGTAATTGACGGTTCAAATACTAGCG GATTTCAAAGAACAGCCTATATATCCCAGGATGGATTTATTGAAACAGAGCACGGGAGAGTAGGAATAACCAGCCTTTGT TTAGAGGAGGATGCATGTAGAAAAATAGAGGGCAATGATAGTTATACAATATATAGAGTGGATAGGTTGGGAATACCATT ATTAGAGATAACCACAGAACCCGACATAACTAACCCCAAAATGGGAAAAGAAAGTGCAAAAAGAATAGGTAGCATATTAA GAGCAACTGGAATGGCTAAAAGGGGGCTGGGCACTATAAGGCAGGATGTAAATGTATCCATAAAAAATGGTGCAAGAATT GAAGCAAAAGGAGTCCAAAATCTTGATTTAATTGAAAAAGTTATTGAAAATGAAGTAATAAGGCAGATGAATTTAATAGA AATAGCAAAAACATTGCAGGAAAGAAATGCCGAAGCCATACACAACATAATAGATATTACAGAATTATTAAAGAATACTA ATTCAAAAGTATTAAAAAGTGCTTTAAAAAAGAAAAATGGAAAAATTAAGGCAGTAGTATTAAAAGGATTTGGAGGACTT GTTGGAAAAGAAATTCAGGAAGGTAGAAGGTTGGGAACTGAATTATCAGACCGGGCAAAAATCATTGCAGGAGTTGGAGG ATTATTCCACACCGATGAGCTCCCACATTACGGCATAACAGGGGAAGAAGTAAAATTATTGAAAGAATATATAAACAGCA TAATATCAATTACAGAACAGGATGCCATTGTATTGGTGGCAGATGAAAATAATAAAGTAGATAATGCCTTAAATGCCATA TTAACCAGAGCGGAAGAGGCGATCTTAGGGGTTCCAGAAGAAACCAGAAAAGCCTTGGAAAATGGAAATACCTCTTATTT AAGGCCACTTGCAGGTTCGGCGAGAATGTATCCTGAAACAGATATTCCAGCTATTTATTTAGAGGAGGAATATATTCAGA GCATAAAAGACAATTTACCAGAGATGCCAGAAACAAAATTAAAACGATTTATAAAAGAATATGAATTAAATGAGGATTTG GCAAATATTATGGTTTCCTCATATAAAGTAAATATGTTTGAAGAGTTATGCAAAAATCATAACACTATAAAACCTACGCT AATAGCCACCACCCTTGAAGCTACGCTGAGAGAAATTAAAAGGGAAGGACATAATACTGACGGACTAACAAAACAACATT TTGATATGGTATTTAGTGGATTGGCAGAAGCAAAAACTTCAAAAGAAGCTATTGTAGATATATTAAAAGGATTTATAGAA TATCCTAATGAAGATTTAGATAAAATTTTAGAAATAAAAGGATTGAAATCACTTTCAAAAGAGGAAGTTGAAGAAATAAT TGAAAATATAATAAATCAAAACATAGAAGTTGTAAATAGTAAAGGTATGGGTGCTATGGGTATGTTGATGGGTAGATGTA TGGCGGAGCTCCGAGGTAAAGCCGATGGAAAAATTATAAACACCGTGTTAAAAAATAAATTAATGGAAAAGGCAAATAAA TAA
Upstream 100 bases:
>100_bases TCAATATTAATAATATATTGAATTAGAACAATATATAGTTATAATGTATTTTATAGCATATATCTTATTAAAGGAAGAGT ATAAAGATTATAGGAGAGGC
Downstream 100 bases:
>100_bases TAAATAATATATTAAACTTAAAAGGGAAAATATGAATGAGATATTGGGATATATTATTGGTGAAACCACCAATACAGAAT TAAGCTTTTTATCATTGGGT
Product: glutamyl-tRNA(Gln) amidotransferase subunit E
Products: NA
Alternate protein names: Glu-ADT subunit E [H]
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MINMELNYNELGLKVGLEIHQQLNTKRKLFCNCPTLIREDSPDGEIQRTLRTSQSEMGEIDKAALIESKKGKKNIYQYYN DTTCLVELDEEPPHAPSEEAIKTALEVSYLMNMEAVNEIQTMRKIVIDGSNTSGFQRTAYISQDGFIETEHGRVGITSLC LEEDACRKIEGNDSYTIYRVDRLGIPLLEITTEPDITNPKMGKESAKRIGSILRATGMAKRGLGTIRQDVNVSIKNGARI EAKGVQNLDLIEKVIENEVIRQMNLIEIAKTLQERNAEAIHNIIDITELLKNTNSKVLKSALKKKNGKIKAVVLKGFGGL VGKEIQEGRRLGTELSDRAKIIAGVGGLFHTDELPHYGITGEEVKLLKEYINSIISITEQDAIVLVADENNKVDNALNAI LTRAEEAILGVPEETRKALENGNTSYLRPLAGSARMYPETDIPAIYLEEEYIQSIKDNLPEMPETKLKRFIKEYELNEDL ANIMVSSYKVNMFEELCKNHNTIKPTLIATTLEATLREIKREGHNTDGLTKQHFDMVFSGLAEAKTSKEAIVDILKGFIE YPNEDLDKILEIKGLKSLSKEEVEEIIENIINQNIEVVNSKGMGAMGMLMGRCMAELRGKADGKIINTVLKNKLMEKANK
Sequences:
>Translated_640_residues MINMELNYNELGLKVGLEIHQQLNTKRKLFCNCPTLIREDSPDGEIQRTLRTSQSEMGEIDKAALIESKKGKKNIYQYYN DTTCLVELDEEPPHAPSEEAIKTALEVSYLMNMEAVNEIQTMRKIVIDGSNTSGFQRTAYISQDGFIETEHGRVGITSLC LEEDACRKIEGNDSYTIYRVDRLGIPLLEITTEPDITNPKMGKESAKRIGSILRATGMAKRGLGTIRQDVNVSIKNGARI EAKGVQNLDLIEKVIENEVIRQMNLIEIAKTLQERNAEAIHNIIDITELLKNTNSKVLKSALKKKNGKIKAVVLKGFGGL VGKEIQEGRRLGTELSDRAKIIAGVGGLFHTDELPHYGITGEEVKLLKEYINSIISITEQDAIVLVADENNKVDNALNAI LTRAEEAILGVPEETRKALENGNTSYLRPLAGSARMYPETDIPAIYLEEEYIQSIKDNLPEMPETKLKRFIKEYELNEDL ANIMVSSYKVNMFEELCKNHNTIKPTLIATTLEATLREIKREGHNTDGLTKQHFDMVFSGLAEAKTSKEAIVDILKGFIE YPNEDLDKILEIKGLKSLSKEEVEEIIENIINQNIEVVNSKGMGAMGMLMGRCMAELRGKADGKIINTVLKNKLMEKANK >Mature_640_residues MINMELNYNELGLKVGLEIHQQLNTKRKLFCNCPTLIREDSPDGEIQRTLRTSQSEMGEIDKAALIESKKGKKNIYQYYN DTTCLVELDEEPPHAPSEEAIKTALEVSYLMNMEAVNEIQTMRKIVIDGSNTSGFQRTAYISQDGFIETEHGRVGITSLC LEEDACRKIEGNDSYTIYRVDRLGIPLLEITTEPDITNPKMGKESAKRIGSILRATGMAKRGLGTIRQDVNVSIKNGARI EAKGVQNLDLIEKVIENEVIRQMNLIEIAKTLQERNAEAIHNIIDITELLKNTNSKVLKSALKKKNGKIKAVVLKGFGGL VGKEIQEGRRLGTELSDRAKIIAGVGGLFHTDELPHYGITGEEVKLLKEYINSIISITEQDAIVLVADENNKVDNALNAI LTRAEEAILGVPEETRKALENGNTSYLRPLAGSARMYPETDIPAIYLEEEYIQSIKDNLPEMPETKLKRFIKEYELNEDL ANIMVSSYKVNMFEELCKNHNTIKPTLIATTLEATLREIKREGHNTDGLTKQHFDMVFSGLAEAKTSKEAIVDILKGFIE YPNEDLDKILEIKGLKSLSKEEVEEIIENIINQNIEVVNSKGMGAMGMLMGRCMAELRGKADGKIINTVLKNKLMEKANK
Specific function: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-ph
COG id: COG2511
COG function: function code J; Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gatB/gatE family. GatE subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319391, Length=281, Percent_Identity=26.6903914590747, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017959 - InterPro: IPR018027 - InterPro: IPR003789 - InterPro: IPR004115 - InterPro: IPR023168 - InterPro: IPR004414 - InterPro: IPR006075 - InterPro: IPR017958 [H]
Pfam domain/function: PF02938 GAD; PF02934 GatB_N; PF02637 GatB_Yqey [H]
EC number: 6.3.5.-
Molecular weight: Translated: 71628; Mature: 71628
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS01234 GATB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINMELNYNELGLKVGLEIHQQLNTKRKLFCNCPTLIREDSPDGEIQRTLRTSQSEMGEI CEEEEECCHHHHHHHHHHHHHHHCCCHHEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCH DKAALIESKKGKKNIYQYYNDTTCLVELDEEPPHAPSEEAIKTALEVSYLMNMEAVNEIQ HHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TMRKIVIDGSNTSGFQRTAYISQDGFIETEHGRVGITSLCLEEDACRKIEGNDSYTIYRV HHHHHHCCCCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHCHHHHHCCCCCCCEEEEEE DRLGIPLLEITTEPDITNPKMGKESAKRIGSILRATGMAKRGLGTIRQDVNVSIKNGARI CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEE EAKGVQNLDLIEKVIENEVIRQMNLIEIAKTLQERNAEAIHNIIDITELLKNTNSKVLKS EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH ALKKKNGKIKAVVLKGFGGLVGKEIQEGRRLGTELSDRAKIIAGVGGLFHTDELPHYGIT HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCCCCC GEEVKLLKEYINSIISITEQDAIVLVADENNKVDNALNAILTRAEEAILGVPEETRKALE HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH NGNTSYLRPLAGSARMYPETDIPAIYLEEEYIQSIKDNLPEMPETKLKRFIKEYELNEDL CCCCCEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH ANIMVSSYKVNMFEELCKNHNTIKPTLIATTLEATLREIKREGHNTDGLTKQHFDMVFSG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LAEAKTSKEAIVDILKGFIEYPNEDLDKILEIKGLKSLSKEEVEEIIENIINQNIEVVNS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEC KGMGAMGMLMGRCMAELRGKADGKIINTVLKNKLMEKANK CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINMELNYNELGLKVGLEIHQQLNTKRKLFCNCPTLIREDSPDGEIQRTLRTSQSEMGEI CEEEEECCHHHHHHHHHHHHHHHCCCHHEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCH DKAALIESKKGKKNIYQYYNDTTCLVELDEEPPHAPSEEAIKTALEVSYLMNMEAVNEIQ HHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TMRKIVIDGSNTSGFQRTAYISQDGFIETEHGRVGITSLCLEEDACRKIEGNDSYTIYRV HHHHHHCCCCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHCHHHHHCCCCCCCEEEEEE DRLGIPLLEITTEPDITNPKMGKESAKRIGSILRATGMAKRGLGTIRQDVNVSIKNGARI CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEE EAKGVQNLDLIEKVIENEVIRQMNLIEIAKTLQERNAEAIHNIIDITELLKNTNSKVLKS EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH ALKKKNGKIKAVVLKGFGGLVGKEIQEGRRLGTELSDRAKIIAGVGGLFHTDELPHYGIT HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCCCCC GEEVKLLKEYINSIISITEQDAIVLVADENNKVDNALNAILTRAEEAILGVPEETRKALE HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH NGNTSYLRPLAGSARMYPETDIPAIYLEEEYIQSIKDNLPEMPETKLKRFIKEYELNEDL CCCCCEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH ANIMVSSYKVNMFEELCKNHNTIKPTLIATTLEATLREIKREGHNTDGLTKQHFDMVFSG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LAEAKTSKEAIVDILKGFIEYPNEDLDKILEIKGLKSLSKEEVEEIIENIINQNIEVVNS HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEC KGMGAMGMLMGRCMAELRGKADGKIINTVLKNKLMEKANK CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA