Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150401548

Identifier: 150401548

GI number: 150401548

Start: 1170952

End: 1171362

Strand: Direct

Name: 150401548

Synonym: Maeo_1125

Alternate gene names: NA

Gene position: 1170952-1171362 (Clockwise)

Preceding gene: 150401546

Following gene: 150401555

Centisome position: 74.61

GC content: 29.44

Gene sequence:

>411_bases
ATGGTAAAAATGGTAAAATTAACCGAAGAAATGAAAAAATCACTAAATGAAGCCATTGTATTTCTTGGCACAGCTTCAAA
AGACGGAATACCAAATATAGCACCTATGAAAGCGCTAAAAGTAATAGATGATGAAACTGTTGTTATATGCGATAATTTCA
TGCTTAAAACATTAAAAAATATTAAAGAAAATCCAAATGTTTCAATTGCTACGGCTGATTGTAGGGAAAATCCATTCCAA
TACAAAGGAGTTGCAGAATATCATACAGAAGGGGAATGGTTTGAAATTGCAAAAGAAATAGATGCACAATTTAACAAAAT
TCCAAAAGGGGCCATTGTAATAAAAATAAAAGAAGTATATAATTTAAAATCTGGTGAAGATGCTGGAAAATTACTTTTAA
AAGATGAATAA

Upstream 100 bases:

>100_bases
TAACAATATATAATTTTTAAATAATAATAATAATAATAATAATAATAATATATATTATAAAAGTTCAAACGAATATCATA
TAACTACATTATTATAGGCG

Downstream 100 bases:

>100_bases
ATTATATTATTATATCTATTTTTTTAAATATTTACTCGGAGCTCCGAAAAATTTATAATAATTTTTAAAATTTAAAAAAT
CTACAATGTTAAAAATAAAA

Product: pyridoxamine 5'-phosphate oxidase-related FMN-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKNIKENPNVSIATADCRENPFQ
YKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVYNLKSGEDAGKLLLKDE

Sequences:

>Translated_136_residues
MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKNIKENPNVSIATADCRENPFQ
YKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVYNLKSGEDAGKLLLKDE
>Mature_136_residues
MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKNIKENPNVSIATADCRENPFQ
YKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVYNLKSGEDAGKLLLKDE

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01243 Pyridox_oxidase [H]

EC number: NA

Molecular weight: Translated: 15248; Mature: 15248

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKN
CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHEEECCCEEEEECHHHHHHHHH
IKENPNVSIATADCRENPFQYKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVY
HHCCCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHH
NLKSGEDAGKLLLKDE
CCCCCCCCCCEEEECC
>Mature Secondary Structure
MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKN
CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHEEECCCEEEEECHHHHHHHHH
IKENPNVSIATADCRENPFQYKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVY
HHCCCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHH
NLKSGEDAGKLLLKDE
CCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]