Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is 150401548
Identifier: 150401548
GI number: 150401548
Start: 1170952
End: 1171362
Strand: Direct
Name: 150401548
Synonym: Maeo_1125
Alternate gene names: NA
Gene position: 1170952-1171362 (Clockwise)
Preceding gene: 150401546
Following gene: 150401555
Centisome position: 74.61
GC content: 29.44
Gene sequence:
>411_bases ATGGTAAAAATGGTAAAATTAACCGAAGAAATGAAAAAATCACTAAATGAAGCCATTGTATTTCTTGGCACAGCTTCAAA AGACGGAATACCAAATATAGCACCTATGAAAGCGCTAAAAGTAATAGATGATGAAACTGTTGTTATATGCGATAATTTCA TGCTTAAAACATTAAAAAATATTAAAGAAAATCCAAATGTTTCAATTGCTACGGCTGATTGTAGGGAAAATCCATTCCAA TACAAAGGAGTTGCAGAATATCATACAGAAGGGGAATGGTTTGAAATTGCAAAAGAAATAGATGCACAATTTAACAAAAT TCCAAAAGGGGCCATTGTAATAAAAATAAAAGAAGTATATAATTTAAAATCTGGTGAAGATGCTGGAAAATTACTTTTAA AAGATGAATAA
Upstream 100 bases:
>100_bases TAACAATATATAATTTTTAAATAATAATAATAATAATAATAATAATAATATATATTATAAAAGTTCAAACGAATATCATA TAACTACATTATTATAGGCG
Downstream 100 bases:
>100_bases ATTATATTATTATATCTATTTTTTTAAATATTTACTCGGAGCTCCGAAAAATTTATAATAATTTTTAAAATTTAAAAAAT CTACAATGTTAAAAATAAAA
Product: pyridoxamine 5'-phosphate oxidase-related FMN-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKNIKENPNVSIATADCRENPFQ YKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVYNLKSGEDAGKLLLKDE
Sequences:
>Translated_136_residues MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKNIKENPNVSIATADCRENPFQ YKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVYNLKSGEDAGKLLLKDE >Mature_136_residues MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKNIKENPNVSIATADCRENPFQ YKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVYNLKSGEDAGKLLLKDE
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 15248; Mature: 15248
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKN CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHEEECCCEEEEECHHHHHHHHH IKENPNVSIATADCRENPFQYKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVY HHCCCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHH NLKSGEDAGKLLLKDE CCCCCCCCCCEEEECC >Mature Secondary Structure MVKMVKLTEEMKKSLNEAIVFLGTASKDGIPNIAPMKALKVIDDETVVICDNFMLKTLKN CCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHEEECCCEEEEECHHHHHHHHH IKENPNVSIATADCRENPFQYKGVAEYHTEGEWFEIAKEIDAQFNKIPKGAIVIKIKEVY HHCCCCEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHH NLKSGEDAGKLLLKDE CCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]