Definition | Methanococcus aeolicus Nankai-3, complete genome. |
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Accession | NC_009635 |
Length | 1,569,500 |
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The map label for this gene is tufA [C]
Identifier: 150401509
GI number: 150401509
Start: 1135424
End: 1136359
Strand: Reverse
Name: tufA [C]
Synonym: Maeo_1086
Alternate gene names: 150401509
Gene position: 1136359-1135424 (Counterclockwise)
Preceding gene: 150401510
Following gene: 150401507
Centisome position: 72.4
GC content: 30.88
Gene sequence:
>936_bases ATGAAAAATATAGGAATAGGATTATTTGGAGACATTAGAGATGCAGGAAAGAATTTAGGAAAGGCAGGAACTTCCACAGA TATAACGCTATATAATTATAAAAATGGAGATGATGCTATTTTTATAATTGAACCTACAAAATATCCAGAAAAAATAATGC CATTATTATATACCATAAATTTAATGGACTATGCGTTAATTTTCGTAGATGAGGTAAAGGCAGAATTGGCAGAAACATTA TTAATATTGGATATGTGCGGAGTAAGTAAAGGAGCTCTGGTGGTTGGAGAATATGTTGATGTAAATCAATTAAAGGCAAT TATTTCAAATACCTCAATGAAAGACTTTGAGATTATGGAAAAGGACTATATAAATATAAGAGAAAAATTAATGGAGCTCC CAATAGATATAGCAGGAGCTCCCAACAATGATTTTGTAAAAATACCAATTGACCACTTTTTTATGGTTAGAAGTGTGGGG ACTGTAATATTGGGGAGAGTTTTAAAAGGAGCTACAAAAATACATGATAATTTAAGGGTTTATCCTACTGAAAATAAGGC AATGGTAAAATCCATACAGGTAAATGATAAAAATTATGATGAGGCACCTCAATTTTCAAGAGTTGGTTTGGCATTAAAAG GAGTTAAAGCCGAAGATTTGGATAGGGGTATGATATTATCTAATGGTGATTTGGAAGTATCCAGCGAATTAACGCTAAAT ATGAAATGGAATCCATATATGCAAAAAGAAATAGCCGTAGGAGAAGGATACCAAATAAATATCGGATTACAAACAGTAAG TAGTGAAGTAATCGAAAAAGAAGGAGATATAATTAAATTAAAATTATTAAAACCAGTAGTTTATGAAAAAGGAGATAAAG CAATATTAATTGACGGAAGTGCAAAAATAAGAATAATCGGAGTTTCCGAATTGTAA
Upstream 100 bases:
>100_bases CCATATTATATTTAATTATTTAGAACATATATGGGACAGTTTTTGAAGATTGACTATATTAAAGATTTAAATTAATATAT ATTATAAAAACGGTGAAATT
Downstream 100 bases:
>100_bases TTATAAGGTTTATGGGAGCTCCCACGGCGTTATAATTGGGGGCGTAATATGGGAGCTCCGATGAAGTTGTGAAGTTAAAT ATAAAAAACATATAACAAGC
Product: elongation factor Tu domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKNIGIGLFGDIRDAGKNLGKAGTSTDITLYNYKNGDDAIFIIEPTKYPEKIMPLLYTINLMDYALIFVDEVKAELAETL LILDMCGVSKGALVVGEYVDVNQLKAIISNTSMKDFEIMEKDYINIREKLMELPIDIAGAPNNDFVKIPIDHFFMVRSVG TVILGRVLKGATKIHDNLRVYPTENKAMVKSIQVNDKNYDEAPQFSRVGLALKGVKAEDLDRGMILSNGDLEVSSELTLN MKWNPYMQKEIAVGEGYQINIGLQTVSSEVIEKEGDIIKLKLLKPVVYEKGDKAILIDGSAKIRIIGVSEL
Sequences:
>Translated_311_residues MKNIGIGLFGDIRDAGKNLGKAGTSTDITLYNYKNGDDAIFIIEPTKYPEKIMPLLYTINLMDYALIFVDEVKAELAETL LILDMCGVSKGALVVGEYVDVNQLKAIISNTSMKDFEIMEKDYINIREKLMELPIDIAGAPNNDFVKIPIDHFFMVRSVG TVILGRVLKGATKIHDNLRVYPTENKAMVKSIQVNDKNYDEAPQFSRVGLALKGVKAEDLDRGMILSNGDLEVSSELTLN MKWNPYMQKEIAVGEGYQINIGLQTVSSEVIEKEGDIIKLKLLKPVVYEKGDKAILIDGSAKIRIIGVSEL >Mature_311_residues MKNIGIGLFGDIRDAGKNLGKAGTSTDITLYNYKNGDDAIFIIEPTKYPEKIMPLLYTINLMDYALIFVDEVKAELAETL LILDMCGVSKGALVVGEYVDVNQLKAIISNTSMKDFEIMEKDYINIREKLMELPIDIAGAPNNDFVKIPIDHFFMVRSVG TVILGRVLKGATKIHDNLRVYPTENKAMVKSIQVNDKNYDEAPQFSRVGLALKGVKAEDLDRGMILSNGDLEVSSELTLN MKWNPYMQKEIAVGEGYQINIGLQTVSSEVIEKEGDIIKLKLLKPVVYEKGDKAILIDGSAKIRIIGVSEL
Specific function: This Protein Promotes The Gtp-Dependent Binding Of Aminoacyl-Trna To The A-Site Of Ribosomes During Protein Biosynthesis. May Play An Important Regulatory Role In Cell Growth And In The Bacterial Response To Nutrient Deprivation. [C]
COG id: COG3276
COG function: function code J; Selenocysteine-specific translation elongation factor
Gene ontology:
Cell location: Cytoplasmic, and membrane-associated [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 34526; Mature: 34526
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIGIGLFGDIRDAGKNLGKAGTSTDITLYNYKNGDDAIFIIEPTKYPEKIMPLLYTIN CCCCCEEEEECHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHH LMDYALIFVDEVKAELAETLLILDMCGVSKGALVVGEYVDVNQLKAIISNTSMKDFEIME HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHH KDYINIREKLMELPIDIAGAPNNDFVKIPIDHFFMVRSVGTVILGRVLKGATKIHDNLRV HHHHHHHHHHHHCCCEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YPTENKAMVKSIQVNDKNYDEAPQFSRVGLALKGVKAEDLDRGMILSNGDLEVSSELTLN EECCCCEEEEEEEECCCCCCCCCCHHHCCEEEECCCHHCCCCCEEEECCCEEEECEEEEE MKWNPYMQKEIAVGEGYQINIGLQTVSSEVIEKEGDIIKLKLLKPVVYEKGDKAILIDGS EECCCCCHHEEECCCCEEEEEEHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCEEEEECC AKIRIIGVSEL CEEEEEEECCC >Mature Secondary Structure MKNIGIGLFGDIRDAGKNLGKAGTSTDITLYNYKNGDDAIFIIEPTKYPEKIMPLLYTIN CCCCCEEEEECHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHH LMDYALIFVDEVKAELAETLLILDMCGVSKGALVVGEYVDVNQLKAIISNTSMKDFEIME HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHH KDYINIREKLMELPIDIAGAPNNDFVKIPIDHFFMVRSVGTVILGRVLKGATKIHDNLRV HHHHHHHHHHHHCCCEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YPTENKAMVKSIQVNDKNYDEAPQFSRVGLALKGVKAEDLDRGMILSNGDLEVSSELTLN EECCCCEEEEEEEECCCCCCCCCCHHHCCEEEECCCHHCCCCCEEEECCCEEEECEEEEE MKWNPYMQKEIAVGEGYQINIGLQTVSSEVIEKEGDIIKLKLLKPVVYEKGDKAILIDGS EECCCCCHHEEECCCCEEEEEEHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCEEEEECC AKIRIIGVSEL CEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]