Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
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Accession | NC_009615 |
Length | 4,811,379 |
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The map label for this gene is 150008233
Identifier: 150008233
GI number: 150008233
Start: 1871919
End: 1873031
Strand: Reverse
Name: 150008233
Synonym: BDI_1599
Alternate gene names: NA
Gene position: 1873031-1871919 (Counterclockwise)
Preceding gene: 150008234
Following gene: 150008232
Centisome position: 38.93
GC content: 59.93
Gene sequence:
>1113_bases ATGGATATATTAACAGGCAAGTGCTCGGATAGGTTCATGGCGCATGTTCTGAAGCGACGTGACCAGGAGGCCGTCCGCTG GTACGTGCTCACGCTCCCTACCGCCGGTGGCGGGCGTGACAGGATCAGCCCCTCGAAGGGGCTGGACGCTGAGCTTTCCC GCCGTGAGCGTCGTGGGGAGGCCTTGTTCGAGTATTTCTCCCCCTCGTATGTCGAGGCGAGGAAGGTGGGCGGCAAGATG GTCAACACGAAACGGCCCCTGCTGTACAACTACGTGTTCGTCCACGCCTCGGAGAACGAGATCTTTAGCCTGAAGCGTAC GCTTCCCCTGTATAATTTCCTCCCCCGGGTTTCCTCCGGCGGGCGGTCTTATTTCCCGTACCTCTCGGATCGTGAGATGG ATACCTTGCGTTGGGTCGCGGCTTCTTACTCCAACGAGCTTCCCGTATACGTGCCAGATAGCGGCCGCTTGTTGAAAGGC GACCGTGTGCGTATCACCTCCGGCCCTTTTACCGACATGGAGGCGGAGGTGGTGGTGCAGCCGGGCGGTGGGCATAAGGA CGTGATGGTGCGTATCCTCGACTGTCTGTGGGTCCCCTTGTTCGAGGTGAGAGCTGGGGAGTACGAGTTGATCGAGCTGA ACACGGGGGGCAAGCACGTGTATACCCATTTGGACAACGACCGTCTGTCGGAGGGCTTGCACGGGGCCTTGGGCCGTTAC CACGCCTCTGGCGTGGTAGTGGATGAGGATGCCCGTCTGGCCCGTGAGGTCCTGCGTGGCTACGCCTCTCTCCGTGGTGA GACCGACGTGATCCGTTGCAAGCTTTACTCTTTGCTCCTTCCAGCCTATCTGCTTTTGGGCGAGTCGGATGAGTTCGATC GTTTGCTCTCCACGATGCGCAGCATGCTCCCGGTGATAAAAGCGCCGCAATCCCGTGCCTTGTTGCTGGTCACGCTGTAC GGCTGTACGGACAGCAGCCTCTACCAGCGCATGGCGCACGAGCTGGTTGGCCCTTGGATGGAGGAGGCCTCGCCCAAGAG GAGCAAGTCCGTGTTGATACGTCGTTTACGGGATTACGACCGCTGGTTCGGGCACGGGAACGGCGATGAATAA
Upstream 100 bases:
>100_bases GTTTATCAAGATGATGTAAATGATTCTTGGTAGGGCTCTGAATTGCCGTGGGGTCTGTTTTCGGACCATGGGATAACCAC TGGAAAAGATAATCATAGAG
Downstream 100 bases:
>100_bases AAGATATGAGAGAAGAGAGAGAGACATGCGGCGTCCCTTCGGGCATCCGGCTGATGAACCTGTTGCGTGAGCGTTTGACA GAGATCATGGATCGTGAGCG
Product: putative transcriptional regulator UpxY-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MDILTGKCSDRFMAHVLKRRDQEAVRWYVLTLPTAGGGRDRISPSKGLDAELSRRERRGEALFEYFSPSYVEARKVGGKM VNTKRPLLYNYVFVHASENEIFSLKRTLPLYNFLPRVSSGGRSYFPYLSDREMDTLRWVAASYSNELPVYVPDSGRLLKG DRVRITSGPFTDMEAEVVVQPGGGHKDVMVRILDCLWVPLFEVRAGEYELIELNTGGKHVYTHLDNDRLSEGLHGALGRY HASGVVVDEDARLAREVLRGYASLRGETDVIRCKLYSLLLPAYLLLGESDEFDRLLSTMRSMLPVIKAPQSRALLLVTLY GCTDSSLYQRMAHELVGPWMEEASPKRSKSVLIRRLRDYDRWFGHGNGDE
Sequences:
>Translated_370_residues MDILTGKCSDRFMAHVLKRRDQEAVRWYVLTLPTAGGGRDRISPSKGLDAELSRRERRGEALFEYFSPSYVEARKVGGKM VNTKRPLLYNYVFVHASENEIFSLKRTLPLYNFLPRVSSGGRSYFPYLSDREMDTLRWVAASYSNELPVYVPDSGRLLKG DRVRITSGPFTDMEAEVVVQPGGGHKDVMVRILDCLWVPLFEVRAGEYELIELNTGGKHVYTHLDNDRLSEGLHGALGRY HASGVVVDEDARLAREVLRGYASLRGETDVIRCKLYSLLLPAYLLLGESDEFDRLLSTMRSMLPVIKAPQSRALLLVTLY GCTDSSLYQRMAHELVGPWMEEASPKRSKSVLIRRLRDYDRWFGHGNGDE >Mature_370_residues MDILTGKCSDRFMAHVLKRRDQEAVRWYVLTLPTAGGGRDRISPSKGLDAELSRRERRGEALFEYFSPSYVEARKVGGKM VNTKRPLLYNYVFVHASENEIFSLKRTLPLYNFLPRVSSGGRSYFPYLSDREMDTLRWVAASYSNELPVYVPDSGRLLKG DRVRITSGPFTDMEAEVVVQPGGGHKDVMVRILDCLWVPLFEVRAGEYELIELNTGGKHVYTHLDNDRLSEGLHGALGRY HASGVVVDEDARLAREVLRGYASLRGETDVIRCKLYSLLLPAYLLLGESDEFDRLLSTMRSMLPVIKAPQSRALLLVTLY GCTDSSLYQRMAHELVGPWMEEASPKRSKSVLIRRLRDYDRWFGHGNGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42064; Mature: 42064
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILTGKCSDRFMAHVLKRRDQEAVRWYVLTLPTAGGGRDRISPSKGLDAELSRRERRGE CCCCCCCCHHHHHHHHHHHCCCHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH ALFEYFSPSYVEARKVGGKMVNTKRPLLYNYVFVHASENEIFSLKRTLPLYNFLPRVSSG HHHHHCCCCHHHHHHCCCEEECCCCCEEEEEEEEEECCCCHHHHHHHCCHHHHHHHHCCC GRSYFPYLSDREMDTLRWVAASYSNELPVYVPDSGRLLKGDRVRITSGPFTDMEAEVVVQ CCEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEECCCEEEECCCCCCCCCEEEEEE PGGGHKDVMVRILDCLWVPLFEVRAGEYELIELNTGGKHVYTHLDNDRLSEGLHGALGRY CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH HASGVVVDEDARLAREVLRGYASLRGETDVIRCKLYSLLLPAYLLLGESDEFDRLLSTMR CCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SMLPVIKAPQSRALLLVTLYGCTDSSLYQRMAHELVGPWMEEASPKRSKSVLIRRLRDYD HHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHH RWFGHGNGDE HHCCCCCCCC >Mature Secondary Structure MDILTGKCSDRFMAHVLKRRDQEAVRWYVLTLPTAGGGRDRISPSKGLDAELSRRERRGE CCCCCCCCHHHHHHHHHHHCCCHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH ALFEYFSPSYVEARKVGGKMVNTKRPLLYNYVFVHASENEIFSLKRTLPLYNFLPRVSSG HHHHHCCCCHHHHHHCCCEEECCCCCEEEEEEEEEECCCCHHHHHHHCCHHHHHHHHCCC GRSYFPYLSDREMDTLRWVAASYSNELPVYVPDSGRLLKGDRVRITSGPFTDMEAEVVVQ CCEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEECCCEEEECCCCCCCCCEEEEEE PGGGHKDVMVRILDCLWVPLFEVRAGEYELIELNTGGKHVYTHLDNDRLSEGLHGALGRY CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH HASGVVVDEDARLAREVLRGYASLRGETDVIRCKLYSLLLPAYLLLGESDEFDRLLSTMR CCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SMLPVIKAPQSRALLLVTLYGCTDSSLYQRMAHELVGPWMEEASPKRSKSVLIRRLRDYD HHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHH RWFGHGNGDE HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA