Click here to switch to the map view.

The map label for this gene is resD [C]

Identifier: 150008234

GI number: 150008234

Start: 1873560

End: 1874492

Strand: Reverse

Name: resD [C]

Synonym: BDI_1600

Alternate gene names: 150008234

Gene position: 1874492-1873560 (Counterclockwise)

Preceding gene: 150008235

Following gene: 150008233

Centisome position: 38.96

GC content: 44.37

Gene sequence:

>933_bases
ATGGAGAAAAAGGATTTAGTAGAAGGGATGAGGTTGTATATCTATAAATTGCGTGTGGATGGGCGTTATTCCACGGCGAA
GAGCTATCAGGATGCATTGAACTCATTCATGCGGTTTTGTGGGTTGGAGGTAATTCCCTATATCTATGTCAATAAGGAGA
ACCTTCGGCGTTATCAGGCCTTTTTGTTGAATAAAGGATGTACATGGAACACGGTGTCGACCTATATGCGTCGGATCCGT
TGTGTGTACAACATGGCGGTGGAGGAAGGGTTGGCCCCCTATATCCCTTATTTATTTAAGGGAGTTTTCACGGGTATAGA
GAGCAAACGCAAAAAGGCGTTACCACAGGATTTATTACGTTCTCTGATGACGGCCTCATTAGATGATCCGGAACTGAGAA
AAACACGGCAGGCATTGTGCCTGATGTTCCAGTTTTGCGGTATGGCATTCGTGGATTTCGCTCATCTGAAAAAGGAGAAT
GTCCGGGGTGGGGTTTTGGAATATAAACGCCAGAAAACGGGTACTCCGATGCTTATAGAGGTACAATCTACCGCATGGGA
GTCGCTGAGGGAACTGTCAAGTGATGTAGGTAAGGACTCACCCTATTTGTTTCCTTTCTTGAAAGGGATAAAAGTGGGAA
AAGAAGCCTACAAGGAGTACACTTCCGCTTTGGCCCATTTTAACCGGAATTTGAAGAGGTTGGCGAGAGCCTGCGGTGTG
TCTATCCCGATCACCTCATATTCGATCCGTCATTCTTTTGCGATGATTTTGAAGGAACAGGATGTCCCGATTGAGATGAT
CAGCGAACTATTGGGCCATAAATCGATCAAGACTACGCAAATCTATTTGAAAAGTTTCTCGTTGGAAAAGATGTCTGCGG
TGAATAAAATTTGTTTTGAGAGTGTGTACAATCATGTACCGAAAGTAGGGTAA

Upstream 100 bases:

>100_bases
TATAAAGGCGGACCGGTTGGTTCGCCTTTTTTTGTATATGCTCAACCTCCCGGATCTGTATTACATTTGCTAAGTTTTAT
CACGAAAAAATAGCGATAGT

Downstream 100 bases:

>100_bases
AGGGAGTAGGCTACTTGGGGAGTAGCGTATTCTTTCACGGCGCAAATGTAGTAAAAAATAACTAAAAACAAGCAAACAAA
TGCGCTTGTTTACTCATTGT

Product: integrase

Products: NA

Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Protein; Site-Specific Recombinase IntIA; Bacteriophage Integrase; Site-Specific Recombinase; Integrase/Site-Specific Recombinase; Tyrosine Recombinase XerD; Recombinase/Integrase; LOW QUALITY PROTEIN Integrase; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MEKKDLVEGMRLYIYKLRVDGRYSTAKSYQDALNSFMRFCGLEVIPYIYVNKENLRRYQAFLLNKGCTWNTVSTYMRRIR
CVYNMAVEEGLAPYIPYLFKGVFTGIESKRKKALPQDLLRSLMTASLDDPELRKTRQALCLMFQFCGMAFVDFAHLKKEN
VRGGVLEYKRQKTGTPMLIEVQSTAWESLRELSSDVGKDSPYLFPFLKGIKVGKEAYKEYTSALAHFNRNLKRLARACGV
SIPITSYSIRHSFAMILKEQDVPIEMISELLGHKSIKTTQIYLKSFSLEKMSAVNKICFESVYNHVPKVG

Sequences:

>Translated_310_residues
MEKKDLVEGMRLYIYKLRVDGRYSTAKSYQDALNSFMRFCGLEVIPYIYVNKENLRRYQAFLLNKGCTWNTVSTYMRRIR
CVYNMAVEEGLAPYIPYLFKGVFTGIESKRKKALPQDLLRSLMTASLDDPELRKTRQALCLMFQFCGMAFVDFAHLKKEN
VRGGVLEYKRQKTGTPMLIEVQSTAWESLRELSSDVGKDSPYLFPFLKGIKVGKEAYKEYTSALAHFNRNLKRLARACGV
SIPITSYSIRHSFAMILKEQDVPIEMISELLGHKSIKTTQIYLKSFSLEKMSAVNKICFESVYNHVPKVG
>Mature_310_residues
MEKKDLVEGMRLYIYKLRVDGRYSTAKSYQDALNSFMRFCGLEVIPYIYVNKENLRRYQAFLLNKGCTWNTVSTYMRRIR
CVYNMAVEEGLAPYIPYLFKGVFTGIESKRKKALPQDLLRSLMTASLDDPELRKTRQALCLMFQFCGMAFVDFAHLKKEN
VRGGVLEYKRQKTGTPMLIEVQSTAWESLRELSSDVGKDSPYLFPFLKGIKVGKEAYKEYTSALAHFNRNLKRLARACGV
SIPITSYSIRHSFAMILKEQDVPIEMISELLGHKSIKTTQIYLKSFSLEKMSAVNKICFESVYNHVPKVG

Specific function: Acts As A Repressor Of Transcription And As A Site- Specific Resolvase That Cleaves At The Rfsf Site. [C]

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35748; Mature: 35748

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKDLVEGMRLYIYKLRVDGRYSTAKSYQDALNSFMRFCGLEVIPYIYVNKENLRRYQA
CCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHEEEECHHHHHHHHH
FLLNKGCTWNTVSTYMRRIRCVYNMAVEEGLAPYIPYLFKGVFTGIESKRKKALPQDLLR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLMTASLDDPELRKTRQALCLMFQFCGMAFVDFAHLKKENVRGGVLEYKRQKTGTPMLIE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEE
VQSTAWESLRELSSDVGKDSPYLFPFLKGIKVGKEAYKEYTSALAHFNRNLKRLARACGV
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SIPITSYSIRHSFAMILKEQDVPIEMISELLGHKSIKTTQIYLKSFSLEKMSAVNKICFE
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVYNHVPKVG
HHHHHCCCCC
>Mature Secondary Structure
MEKKDLVEGMRLYIYKLRVDGRYSTAKSYQDALNSFMRFCGLEVIPYIYVNKENLRRYQA
CCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHEEEECHHHHHHHHH
FLLNKGCTWNTVSTYMRRIRCVYNMAVEEGLAPYIPYLFKGVFTGIESKRKKALPQDLLR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SLMTASLDDPELRKTRQALCLMFQFCGMAFVDFAHLKKENVRGGVLEYKRQKTGTPMLIE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEE
VQSTAWESLRELSSDVGKDSPYLFPFLKGIKVGKEAYKEYTSALAHFNRNLKRLARACGV
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SIPITSYSIRHSFAMILKEQDVPIEMISELLGHKSIKTTQIYLKSFSLEKMSAVNKICFE
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVYNHVPKVG
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA