Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
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Accession | NC_009615 |
Length | 4,811,379 |
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The map label for this gene is 150008202
Identifier: 150008202
GI number: 150008202
Start: 1835458
End: 1836732
Strand: Reverse
Name: 150008202
Synonym: BDI_1568
Alternate gene names: NA
Gene position: 1836732-1835458 (Counterclockwise)
Preceding gene: 150008206
Following gene: 150008201
Centisome position: 38.17
GC content: 45.25
Gene sequence:
>1275_bases ATGAGAGCAAGTATCTTAGCTATTTTAATTTTAGGGGGGATTGTCTTAAACATAAAGGCTCAGTTTTCTTATAATGAAAA GGGTCAAGCCATCCCTCCTGCATCACAACCTTTCTGCAAAGAGGCTTTTGAGTCAACCGGGCATACGGTTATACGCTGGT TGGGGAACGCTGGCTTTCTGATTAATAGCCGTGGTACGTGTTTGATGGTCGATCCTATGTTGAAGGGATTTGATATGCCT TTGTTAATAAATATGCCGATCGCCCCTAAAGATGTTCCCCATTTGGATGCGGTATTGATCACTCATTGCGACAATGATCA TTACAGTGTTCCTACTTGTACGGAAATGTCTTCTGTATGCCGGGAATATCATTCTACATTCTACATGGATTCTTTGATGG AAGCACAGGGTTTGAACTCTTTCGGACATCGTATCGGGGAGACTTTTAATGTTGGTCCGATTTCTATCAAGTTAACTCCG GCTTACCATACGTGGCAAAATGAGTATCCGGGATATACGCGTGAATTTAAGGTTGAAGATTATTGTGGTTTCCTCATGAA AACACCGGATGGCTTAATTTGGGCACCGGGAGATTCCCGCTTTCTTCCTGAGTTCTTGGAATTACCTGCCCCGGACGTGA TTTTCTTTGATTTTTCGGATGATTCATGGCATATAGGATTGGAGGGAGCCATAAAGATCGCAAATGCTTATCCTAAAGCG CAGCTTCTCCTGTCTCATTGGGGAACGGTGGATGCTCCCGATATGAAACCATTCAATGCCGACCCTAAAATGCTAGAAGA GCGTATCTTCAATCCGGAACGTGTTCATGTCTTAGCCCCGGGAGAAGCTTTTGACCTTGTAGCTCTCAGCTCTAGCGAGG GTGAACAAAGTGCCGAGACATTGATTTTCCCTGCTGACGCAAAGGCTTCGTCGGAGTATAATACGGGGGATGTCTATGTC TCCTTGTTGAAGGAGTCTGGTAATACGATGATCGCGCATTTTATATTCAAACCTTACAGTCGTAATTTCTGGCATTACCA TCCGGATGCCGAACAAACCTTGTTAGTACTTGATGGAGAAGGATATTATCAAGAGGAAGGAGGAGAGAAACGTGTGATCC GGAAGGGTGATGTGATCGTGACACCTCCTAATGTACGCCATTGGAATGGGGCGACACCGGGTAGCTCTATCGTGTGTATG ACCATTACGGAACATGCGATCGAGAATCATGCCGTACAGCTCCGGGCTGTGACGGATAAGGAGTATGACCGATGA
Upstream 100 bases:
>100_bases CCGTAATAGCGTTACAAACATCTGTAATATGTGCACATCGTTTTATGTTGAATCTAGGTAATTTTGTCATAGAAATTTAA AACTCTAAATTCAATATACT
Downstream 100 bases:
>100_bases AATTGGTATGTCTATCTGTGGTTTTGATACATGTTTGGATGTAGGAACGTAGTATTTTTGCCGTGAATGGAATATTAATT AGAAAGGTCATAAGTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Family Protein; Cupin 2 Barrel; Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRASILAILILGGIVLNIKAQFSYNEKGQAIPPASQPFCKEAFESTGHTVIRWLGNAGFLINSRGTCLMVDPMLKGFDMP LLINMPIAPKDVPHLDAVLITHCDNDHYSVPTCTEMSSVCREYHSTFYMDSLMEAQGLNSFGHRIGETFNVGPISIKLTP AYHTWQNEYPGYTREFKVEDYCGFLMKTPDGLIWAPGDSRFLPEFLELPAPDVIFFDFSDDSWHIGLEGAIKIANAYPKA QLLLSHWGTVDAPDMKPFNADPKMLEERIFNPERVHVLAPGEAFDLVALSSSEGEQSAETLIFPADAKASSEYNTGDVYV SLLKESGNTMIAHFIFKPYSRNFWHYHPDAEQTLLVLDGEGYYQEEGGEKRVIRKGDVIVTPPNVRHWNGATPGSSIVCM TITEHAIENHAVQLRAVTDKEYDR
Sequences:
>Translated_424_residues MRASILAILILGGIVLNIKAQFSYNEKGQAIPPASQPFCKEAFESTGHTVIRWLGNAGFLINSRGTCLMVDPMLKGFDMP LLINMPIAPKDVPHLDAVLITHCDNDHYSVPTCTEMSSVCREYHSTFYMDSLMEAQGLNSFGHRIGETFNVGPISIKLTP AYHTWQNEYPGYTREFKVEDYCGFLMKTPDGLIWAPGDSRFLPEFLELPAPDVIFFDFSDDSWHIGLEGAIKIANAYPKA QLLLSHWGTVDAPDMKPFNADPKMLEERIFNPERVHVLAPGEAFDLVALSSSEGEQSAETLIFPADAKASSEYNTGDVYV SLLKESGNTMIAHFIFKPYSRNFWHYHPDAEQTLLVLDGEGYYQEEGGEKRVIRKGDVIVTPPNVRHWNGATPGSSIVCM TITEHAIENHAVQLRAVTDKEYDR >Mature_424_residues MRASILAILILGGIVLNIKAQFSYNEKGQAIPPASQPFCKEAFESTGHTVIRWLGNAGFLINSRGTCLMVDPMLKGFDMP LLINMPIAPKDVPHLDAVLITHCDNDHYSVPTCTEMSSVCREYHSTFYMDSLMEAQGLNSFGHRIGETFNVGPISIKLTP AYHTWQNEYPGYTREFKVEDYCGFLMKTPDGLIWAPGDSRFLPEFLELPAPDVIFFDFSDDSWHIGLEGAIKIANAYPKA QLLLSHWGTVDAPDMKPFNADPKMLEERIFNPERVHVLAPGEAFDLVALSSSEGEQSAETLIFPADAKASSEYNTGDVYV SLLKESGNTMIAHFIFKPYSRNFWHYHPDAEQTLLVLDGEGYYQEEGGEKRVIRKGDVIVTPPNVRHWNGATPGSSIVCM TITEHAIENHAVQLRAVTDKEYDR
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47414; Mature: 47414
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASILAILILGGIVLNIKAQFSYNEKGQAIPPASQPFCKEAFESTGHTVIRWLGNAGFL CCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEE INSRGTCLMVDPMLKGFDMPLLINMPIAPKDVPHLDAVLITHCDNDHYSVPTCTEMSSVC EECCCCEEEECHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH REYHSTFYMDSLMEAQGLNSFGHRIGETFNVGPISIKLTPAYHTWQNEYPGYTREFKVED HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCEECCCCCCCCCCEEEEEHH YCGFLMKTPDGLIWAPGDSRFLPEFLELPAPDVIFFDFSDDSWHIGLEGAIKIANAYPKA HCCCEEECCCCEEECCCCCCCCHHHHCCCCCCEEEEEECCCCEEEECCEEEEEECCCCHH QLLLSHWGTVDAPDMKPFNADPKMLEERIFNPERVHVLAPGEAFDLVALSSSEGEQSAET HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCE LIFPADAKASSEYNTGDVYVSLLKESGNTMIAHFIFKPYSRNFWHYHPDAEQTLLVLDGE EEEECCCCCCCCCCCCCEEEEEEHHCCCEEEEEEEECCCCCCCEEECCCCCCEEEEECCC GYYQEEGGEKRVIRKGDVIVTPPNVRHWNGATPGSSIVCMTITEHAIENHAVQLRAVTDK CCEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEEHHHHCCCEEEEEEECCC EYDR CCCC >Mature Secondary Structure MRASILAILILGGIVLNIKAQFSYNEKGQAIPPASQPFCKEAFESTGHTVIRWLGNAGFL CCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEE INSRGTCLMVDPMLKGFDMPLLINMPIAPKDVPHLDAVLITHCDNDHYSVPTCTEMSSVC EECCCCEEEECHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH REYHSTFYMDSLMEAQGLNSFGHRIGETFNVGPISIKLTPAYHTWQNEYPGYTREFKVED HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCEECCCCCCCCCCEEEEEHH YCGFLMKTPDGLIWAPGDSRFLPEFLELPAPDVIFFDFSDDSWHIGLEGAIKIANAYPKA HCCCEEECCCCEEECCCCCCCCHHHHCCCCCCEEEEEECCCCEEEECCEEEEEECCCCHH QLLLSHWGTVDAPDMKPFNADPKMLEERIFNPERVHVLAPGEAFDLVALSSSEGEQSAET HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCE LIFPADAKASSEYNTGDVYVSLLKESGNTMIAHFIFKPYSRNFWHYHPDAEQTLLVLDGE EEEECCCCCCCCCCCCCEEEEEEHHCCCEEEEEEEECCCCCCCEEECCCCCCEEEEECCC GYYQEEGGEKRVIRKGDVIVTPPNVRHWNGATPGSSIVCMTITEHAIENHAVQLRAVTDK CCEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEEHHHHCCCEEEEEEECCC EYDR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA