Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
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Accession | NC_009615 |
Length | 4,811,379 |
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The map label for this gene is 150008206
Identifier: 150008206
GI number: 150008206
Start: 1839532
End: 1842090
Strand: Reverse
Name: 150008206
Synonym: BDI_1572
Alternate gene names: NA
Gene position: 1842090-1839532 (Counterclockwise)
Preceding gene: 150008207
Following gene: 150008202
Centisome position: 38.29
GC content: 44.7
Gene sequence:
>2559_bases ATGGGGAAGAGAATTGTTTTTATATGGCTTTTATTGGCGTTCGCTTGGGTAGCGAAGAGCCAGAACTACATGATAAAAGG AATCGTGACTGATTCCATTACGGGAGAACCTTTGCCTTATGTGGCTGTGATTTTGAAGGGAACTACGATAGGTGCTACGA CAGATCTGGATGGGGCTTTTACGCTCTCCTCTTCATCTAAGGTACGTACTTTACAGGTCTCTTATTTGGGTTATACGGAG AAAGAATTGAAATTCGTTCCGGGTAAAGCGGAACATTTGAAGATTCAGCTAGCTCCGACAAGTATTAATTTGTCGGAGGT GATCATCAAGCCGGGAAAGGAAAGATATCGGAAGAAGGATAATCCTGCGGTTACCTTTATCAAAAACGCTATCGCACGTC GGGAGAGCAACGATCCTCGTAATCATGATTATTTTCGGTATGATCAATACGAGAAGATGGTCTTCGCTATGAACGATTAC CAACCGAAACCGAAAAAGGATGGAAAGGCGGGAAAGTTTGACTTCTTGACTGAGTTTATCGATACGTTGGAGGTGGGAAA GACGATCTTGCCGGTATCCGAACGTGAGAAAATCCAGACCGTTTATTATCGTAAAGACCCGAAGACGGAAAAGAGGGTCG TTCAGGCTACGAAAGCGGCTGGTGTGGATGAGGTCTTCTCACGAGACGGTATGCAACAGTTCTTGAATGAGGTATTCCGG GAAGTGAATATCTTCCAGAATGATATTCCTTTGTTCTTGAACCGTTTCGTTAGCCCTATGTCTACGATGGGACCTAACTT CTATAAATATTATTTGCTAGACACGGTGGAGGTCGCCGGACAGAAGTGTGTGGATTTGGGTTTCGCTCCGTTTACTCCGG AGACGTTCGGCTTTACGGGACATCTTTTTATCACGTTGGATTCTACTTATTTCGTGCAGAAGGTTAAGTTGAATGTCCCG AAGAAGATCAACTTGAATTTTGTCGGTGGAATGACGATCGAGCAGACTTTCGACCGTGCCCCGGATGGGACTCGTATCAT TACGAAAGATGATATCAACGTGGACTTCAAATTGACGGAGAAATCGAAAGGAATGTATGCCCGCCGTTTGAATATCTATT CGAATCAAGCATTTGAGGGACCCGATGATCCTAAAGTATTCGAGGAGAGCGCACCTATTATTATACCGATGGAAGCTTAT CGCCGTTCGGCGGATTTCTGGGAGGAGAATCGTCCTACTGAGGCGGGAACTCGCAAGCAGAATAACGTGGAGTTGCTAAT GGCGAAACTTCGTTCCGTTCCTATTTTCTATGTGACGGAGAAGGTTGTTTCGATCCTTACCTCCGGTTATATCGCGACGA ATAAGATTCCGGAGAAGAGCAAGTTCGAGTTTGGTCCGATGAACACCTATATCAGTGGTAACGCGATTGAGGGGGCCCGC TTCCGTGTCGGTGGAACCACGACAACGGCGTTCAGTAAACGTCTTTTCTTGGATGGTTATTTGGCTTATGGATCGAAAGA CCGCAAGTTGAAATATGATGGTATCGTAGAATATTCTTTTATCGATAAGAAGGATTATCGGAAAGAATTTCCCGTGCATT CTATTCGGTTTGAGTACCTATATGATATTAACCAGTTAGGTCAGCAGTATATGTATACCAACAAGGATAATATGTTCTTA GCCTTGAAGCGGCAGAAGGATACACGTGCCACCTATTTAAGGAATATGGAACTGACCTATTACCGTGAACATTATAACGG CTGGGCTTATGGGGCGGTACTTCGGAATTTTAAGGAATACTCAACCGGTTACGCCGCATTCGACCGTATCGGTCCGGATG GCCAGATCACGGCTACCGATTCCTACCGGATGTCGGAAGTGGAGTTTAAGTTCCGTTTTGCCCCGAATGAGAAATTCTAC CAGACTCGTAATTACCGTTATCCGATTACGCTTGACGCACCGGTATTCACCTTGAACCATACGATGGCTTTCCAAGATGT ATTAGGTAGTTCGTATGATTATCAGAAGACGGAGATCGGTATCCAGAAACGCTTCTGGTTCTCTGCTTTCGGTTATGTGG ATATTCTCGCTAAAGCAGGTAAAGTTTGGACAAAAGCCCCTTATCCTTTGTTGATCTTGCCAAACGCAAACTTGTCGTAT TTGGTGCAACCGGAATCTTATACGAATATGAATGCGATGGAGTTCATCAACGATGAGTACGCTTCGTGGGATATTACTTA TTTCATGAACGGAGCCTTGTTGAACCGTATCCCGCTTATCAAGAAGTTAAAATGGAGAGAGGTCTTTTCTTTCCGGGGTA TGTTCGGACACTTGACGGATAAGAATAATCCGTATATCAGTGAGCAGAATGAAGGCTTGTTCTTATTCCCGCAGGGCTCT TACCTGATGGACCCGTCTACTCCTTATATGGAGGCGGGTGTCGGTATCGAGAATATCTTTAAGTTCTTGCGTTTGGATTA TGTATGGCGTCTGACCTATAAGGATCATCCGGGCATCCAGACAAAGGGTATACGTTTTATGATGAAGCTATCCTTCTAG
Upstream 100 bases:
>100_bases CCTGTTTTGTTGCTAATTGGAATATATTGCATGTGTTTTGGAACATTTATATAAATGATCCTGTTGTACTTTTGCGGAGT TTAATGAGGTGTCAGATCTG
Downstream 100 bases:
>100_bases GGCAAGTATTATTTCCAGTCGCTGAACTCAAAACTTAATTGTTCCCAACGGTCTTTCGTATGAGGCTCCTCTTTTACGGG ATTAGATACGGATAGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor
Number of amino acids: Translated: 852; Mature: 851
Protein sequence:
>852_residues MGKRIVFIWLLLAFAWVAKSQNYMIKGIVTDSITGEPLPYVAVILKGTTIGATTDLDGAFTLSSSSKVRTLQVSYLGYTE KELKFVPGKAEHLKIQLAPTSINLSEVIIKPGKERYRKKDNPAVTFIKNAIARRESNDPRNHDYFRYDQYEKMVFAMNDY QPKPKKDGKAGKFDFLTEFIDTLEVGKTILPVSEREKIQTVYYRKDPKTEKRVVQATKAAGVDEVFSRDGMQQFLNEVFR EVNIFQNDIPLFLNRFVSPMSTMGPNFYKYYLLDTVEVAGQKCVDLGFAPFTPETFGFTGHLFITLDSTYFVQKVKLNVP KKINLNFVGGMTIEQTFDRAPDGTRIITKDDINVDFKLTEKSKGMYARRLNIYSNQAFEGPDDPKVFEESAPIIIPMEAY RRSADFWEENRPTEAGTRKQNNVELLMAKLRSVPIFYVTEKVVSILTSGYIATNKIPEKSKFEFGPMNTYISGNAIEGAR FRVGGTTTTAFSKRLFLDGYLAYGSKDRKLKYDGIVEYSFIDKKDYRKEFPVHSIRFEYLYDINQLGQQYMYTNKDNMFL ALKRQKDTRATYLRNMELTYYREHYNGWAYGAVLRNFKEYSTGYAAFDRIGPDGQITATDSYRMSEVEFKFRFAPNEKFY QTRNYRYPITLDAPVFTLNHTMAFQDVLGSSYDYQKTEIGIQKRFWFSAFGYVDILAKAGKVWTKAPYPLLILPNANLSY LVQPESYTNMNAMEFINDEYASWDITYFMNGALLNRIPLIKKLKWREVFSFRGMFGHLTDKNNPYISEQNEGLFLFPQGS YLMDPSTPYMEAGVGIENIFKFLRLDYVWRLTYKDHPGIQTKGIRFMMKLSF
Sequences:
>Translated_852_residues MGKRIVFIWLLLAFAWVAKSQNYMIKGIVTDSITGEPLPYVAVILKGTTIGATTDLDGAFTLSSSSKVRTLQVSYLGYTE KELKFVPGKAEHLKIQLAPTSINLSEVIIKPGKERYRKKDNPAVTFIKNAIARRESNDPRNHDYFRYDQYEKMVFAMNDY QPKPKKDGKAGKFDFLTEFIDTLEVGKTILPVSEREKIQTVYYRKDPKTEKRVVQATKAAGVDEVFSRDGMQQFLNEVFR EVNIFQNDIPLFLNRFVSPMSTMGPNFYKYYLLDTVEVAGQKCVDLGFAPFTPETFGFTGHLFITLDSTYFVQKVKLNVP KKINLNFVGGMTIEQTFDRAPDGTRIITKDDINVDFKLTEKSKGMYARRLNIYSNQAFEGPDDPKVFEESAPIIIPMEAY RRSADFWEENRPTEAGTRKQNNVELLMAKLRSVPIFYVTEKVVSILTSGYIATNKIPEKSKFEFGPMNTYISGNAIEGAR FRVGGTTTTAFSKRLFLDGYLAYGSKDRKLKYDGIVEYSFIDKKDYRKEFPVHSIRFEYLYDINQLGQQYMYTNKDNMFL ALKRQKDTRATYLRNMELTYYREHYNGWAYGAVLRNFKEYSTGYAAFDRIGPDGQITATDSYRMSEVEFKFRFAPNEKFY QTRNYRYPITLDAPVFTLNHTMAFQDVLGSSYDYQKTEIGIQKRFWFSAFGYVDILAKAGKVWTKAPYPLLILPNANLSY LVQPESYTNMNAMEFINDEYASWDITYFMNGALLNRIPLIKKLKWREVFSFRGMFGHLTDKNNPYISEQNEGLFLFPQGS YLMDPSTPYMEAGVGIENIFKFLRLDYVWRLTYKDHPGIQTKGIRFMMKLSF >Mature_851_residues GKRIVFIWLLLAFAWVAKSQNYMIKGIVTDSITGEPLPYVAVILKGTTIGATTDLDGAFTLSSSSKVRTLQVSYLGYTEK ELKFVPGKAEHLKIQLAPTSINLSEVIIKPGKERYRKKDNPAVTFIKNAIARRESNDPRNHDYFRYDQYEKMVFAMNDYQ PKPKKDGKAGKFDFLTEFIDTLEVGKTILPVSEREKIQTVYYRKDPKTEKRVVQATKAAGVDEVFSRDGMQQFLNEVFRE VNIFQNDIPLFLNRFVSPMSTMGPNFYKYYLLDTVEVAGQKCVDLGFAPFTPETFGFTGHLFITLDSTYFVQKVKLNVPK KINLNFVGGMTIEQTFDRAPDGTRIITKDDINVDFKLTEKSKGMYARRLNIYSNQAFEGPDDPKVFEESAPIIIPMEAYR RSADFWEENRPTEAGTRKQNNVELLMAKLRSVPIFYVTEKVVSILTSGYIATNKIPEKSKFEFGPMNTYISGNAIEGARF RVGGTTTTAFSKRLFLDGYLAYGSKDRKLKYDGIVEYSFIDKKDYRKEFPVHSIRFEYLYDINQLGQQYMYTNKDNMFLA LKRQKDTRATYLRNMELTYYREHYNGWAYGAVLRNFKEYSTGYAAFDRIGPDGQITATDSYRMSEVEFKFRFAPNEKFYQ TRNYRYPITLDAPVFTLNHTMAFQDVLGSSYDYQKTEIGIQKRFWFSAFGYVDILAKAGKVWTKAPYPLLILPNANLSYL VQPESYTNMNAMEFINDEYASWDITYFMNGALLNRIPLIKKLKWREVFSFRGMFGHLTDKNNPYISEQNEGLFLFPQGSY LMDPSTPYMEAGVGIENIFKFLRLDYVWRLTYKDHPGIQTKGIRFMMKLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98658; Mature: 98527
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRIVFIWLLLAFAWVAKSQNYMIKGIVTDSITGEPLPYVAVILKGTTIGATTDLDGAF CCCEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEECCEECCCCCCCCEE TLSSSSKVRTLQVSYLGYTEKELKFVPGKAEHLKIQLAPTSINLSEVIIKPGKERYRKKD EECCCCCEEEEEEEECCCCHHHEEECCCCCEEEEEEEECCCCCHHHEEECCCHHHHHCCC NPAVTFIKNAIARRESNDPRNHDYFRYDQYEKMVFAMNDYQPKPKKDGKAGKFDFLTEFI CCHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH DTLEVGKTILPVSEREKIQTVYYRKDPKTEKRVVQATKAAGVDEVFSRDGMQQFLNEVFR HHHHHCCEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EVNIFQNDIPLFLNRFVSPMSTMGPNFYKYYLLDTVEVAGQKCVDLGFAPFTPETFGFTG HHHHCCCCHHHHHHHHHCHHHHCCCCEEEEEEEEEHHHCCCHHHCCCCCCCCCCCCCCEE HLFITLDSTYFVQKVKLNVPKKINLNFVGGMTIEQTFDRAPDGTRIITKDDINVDFKLTE EEEEEECCCEEEEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCEEEEECCCCEEEEEEC KSKGMYARRLNIYSNQAFEGPDDPKVFEESAPIIIPMEAYRRSADFWEENRPTEAGTRKQ CCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCEEEEHHHHHCCCHHHHCCCCCCCCCCCC NNVELLMAKLRSVPIFYVTEKVVSILTSGYIATNKIPEKSKFEFGPMNTYISGNAIEGAR CCHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCE FRVGGTTTTAFSKRLFLDGYLAYGSKDRKLKYDGIVEYSFIDKKDYRKEFPVHSIRFEYL EEECCCCHHHHHHHHEEEEEEEECCCCCEEEECCEEEEEECCCHHHHHHCCCCEEEHHHH YDINQLGQQYMYTNKDNMFLALKRQKDTRATYLRNMELTYYREHYNGWAYGAVLRNFKEY HHHHHHCHHHEEECCCCEEEEEECCCCCHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHH STGYAAFDRIGPDGQITATDSYRMSEVEFKFRFAPNEKFYQTRNYRYPITLDAPVFTLNH CCCHHHHHCCCCCCEEEECCCCEEEEEEEEEEECCCCHHHHCCCEEEEEEECCCEEEECC TMAFQDVLGSSYDYQKTEIGIQKRFWFSAFGYVDILAKAGKVWTKAPYPLLILPNANLSY HHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCEE LVQPESYTNMNAMEFINDEYASWDITYFMNGALLNRIPLIKKLKWREVFSFRGMFGHLTD EECCCCCCCCCHHHHHCCCCCCEEEEEEECCHHHHHCHHHHHHHHHHHHHHCCCEEECCC KNNPYISEQNEGLFLFPQGSYLMDPSTPYMEAGVGIENIFKFLRLDYVWRLTYKDHPGIQ CCCCEECCCCCCEEEEECCCEEECCCCCHHHCCCCHHHHHHHHHHEEEEEEEECCCCCCC TKGIRFMMKLSF CCCEEEEEEECC >Mature Secondary Structure GKRIVFIWLLLAFAWVAKSQNYMIKGIVTDSITGEPLPYVAVILKGTTIGATTDLDGAF CCEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEECCEECCCCCCCCEE TLSSSSKVRTLQVSYLGYTEKELKFVPGKAEHLKIQLAPTSINLSEVIIKPGKERYRKKD EECCCCCEEEEEEEECCCCHHHEEECCCCCEEEEEEEECCCCCHHHEEECCCHHHHHCCC NPAVTFIKNAIARRESNDPRNHDYFRYDQYEKMVFAMNDYQPKPKKDGKAGKFDFLTEFI CCHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH DTLEVGKTILPVSEREKIQTVYYRKDPKTEKRVVQATKAAGVDEVFSRDGMQQFLNEVFR HHHHHCCEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EVNIFQNDIPLFLNRFVSPMSTMGPNFYKYYLLDTVEVAGQKCVDLGFAPFTPETFGFTG HHHHCCCCHHHHHHHHHCHHHHCCCCEEEEEEEEEHHHCCCHHHCCCCCCCCCCCCCCEE HLFITLDSTYFVQKVKLNVPKKINLNFVGGMTIEQTFDRAPDGTRIITKDDINVDFKLTE EEEEEECCCEEEEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCEEEEECCCCEEEEEEC KSKGMYARRLNIYSNQAFEGPDDPKVFEESAPIIIPMEAYRRSADFWEENRPTEAGTRKQ CCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCEEEEHHHHHCCCHHHHCCCCCCCCCCCC NNVELLMAKLRSVPIFYVTEKVVSILTSGYIATNKIPEKSKFEFGPMNTYISGNAIEGAR CCHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCE FRVGGTTTTAFSKRLFLDGYLAYGSKDRKLKYDGIVEYSFIDKKDYRKEFPVHSIRFEYL EEECCCCHHHHHHHHEEEEEEEECCCCCEEEECCEEEEEECCCHHHHHHCCCCEEEHHHH YDINQLGQQYMYTNKDNMFLALKRQKDTRATYLRNMELTYYREHYNGWAYGAVLRNFKEY HHHHHHCHHHEEECCCCEEEEEECCCCCHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHH STGYAAFDRIGPDGQITATDSYRMSEVEFKFRFAPNEKFYQTRNYRYPITLDAPVFTLNH CCCHHHHHCCCCCCEEEECCCCEEEEEEEEEEECCCCHHHHCCCEEEEEEECCCEEEECC TMAFQDVLGSSYDYQKTEIGIQKRFWFSAFGYVDILAKAGKVWTKAPYPLLILPNANLSY HHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCEE LVQPESYTNMNAMEFINDEYASWDITYFMNGALLNRIPLIKKLKWREVFSFRGMFGHLTD EECCCCCCCCCHHHHHCCCCCCEEEEEEECCHHHHHCHHHHHHHHHHHHHHCCCEEECCC KNNPYISEQNEGLFLFPQGSYLMDPSTPYMEAGVGIENIFKFLRLDYVWRLTYKDHPGIQ CCCCEECCCCCCEEEEECCCEEECCCCCHHHCCCCHHHHHHHHHHEEEEEEEECCCCCCC TKGIRFMMKLSF CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA