| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yeeN [C]
Identifier: 150005971
GI number: 150005971
Start: 4322386
End: 4323126
Strand: Direct
Name: yeeN [C]
Synonym: BVU_3469
Alternate gene names: 150005971
Gene position: 4322386-4323126 (Clockwise)
Preceding gene: 150005970
Following gene: 150005972
Centisome position: 83.72
GC content: 41.43
Gene sequence:
>741_bases ATGGGAAGAGCATTTGAATATAGAAAAGCTACAAAGCTGAAAAGATGGGGCCACATGGCCAAAACATTTACAAGACTGGG TAAACAAATCGCTATAGCTGTAAAAGCAGGTGGTCCGGAACCCGAAAATAACCCGACCCTACGTGGTGTGATCGCTACTT GTAAGCGTGAAAACATGCCGAAGGATAACATTGAACGCGCCATTAAGAATGCAATGGGTAAAGATACCAGTGACTACAAA GGTATGACTTACGAAGGATATGGTCCTCACGGAGTAGCTGTATTTGTTGATACATTGACAGACAACACTACCCGTACCGT AGCAGATGTGCGTTCAGTATTCAACAAATTCGGTGGAAACTTGGGTACTACCGGTTCCTTAGCTTTCTTGTTCGACCATA AATGTGTATTTACTTTCAAGAAGAAAGAAGGAATGGATATGGAAGAACTGATCCTGGATTTGATTGACTATAATGTAGAG GATGAGTTCGACGAAGATGAAGAAGAAGGAACTATCACCATCTATGGTGATCCGAAGAGCTACGCAGCAATTCAGAAACA CTTGGAAGAATGTGGTTTCGAAGAAGTGGGTGGTGATTTCACATATATTCCCAATGACTTAAAAGATGTGACTCCTGAAC AACGTGAAACTCTAGACAAGATGGTAGAGCGTCTGGAAGAATTTGATGATGTTCAGACCGTTTATACAAACATGAAACCT GCATCTGAAGAGGAAGAATAA
Upstream 100 bases:
>100_bases GATTGACAAGATCATGTCCAAACTGATTGCTAACCTGGAAAACAAACTAGGTGCAAAACTAAGATAATAATAAAAATAAC CATTATAAAACTACAATCCA
Downstream 100 bases:
>100_bases AATGAAAATAACCTATAAGACGCAGGGCACTTGCAGCAGCCACATCGAAGTGGAAGTAGAAGATGACGTTATTCAACAAG TTTTCTTTTGGGGCGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MGRAFEYRKATKLKRWGHMAKTFTRLGKQIAIAVKAGGPEPENNPTLRGVIATCKRENMPKDNIERAIKNAMGKDTSDYK GMTYEGYGPHGVAVFVDTLTDNTTRTVADVRSVFNKFGGNLGTTGSLAFLFDHKCVFTFKKKEGMDMEELILDLIDYNVE DEFDEDEEEGTITIYGDPKSYAAIQKHLEECGFEEVGGDFTYIPNDLKDVTPEQRETLDKMVERLEEFDDVQTVYTNMKP ASEEEE
Sequences:
>Translated_246_residues MGRAFEYRKATKLKRWGHMAKTFTRLGKQIAIAVKAGGPEPENNPTLRGVIATCKRENMPKDNIERAIKNAMGKDTSDYK GMTYEGYGPHGVAVFVDTLTDNTTRTVADVRSVFNKFGGNLGTTGSLAFLFDHKCVFTFKKKEGMDMEELILDLIDYNVE DEFDEDEEEGTITIYGDPKSYAAIQKHLEECGFEEVGGDFTYIPNDLKDVTPEQRETLDKMVERLEEFDDVQTVYTNMKP ASEEEE >Mature_245_residues GRAFEYRKATKLKRWGHMAKTFTRLGKQIAIAVKAGGPEPENNPTLRGVIATCKRENMPKDNIERAIKNAMGKDTSDYKG MTYEGYGPHGVAVFVDTLTDNTTRTVADVRSVFNKFGGNLGTTGSLAFLFDHKCVFTFKKKEGMDMEELILDLIDYNVED EFDEDEEEGTITIYGDPKSYAAIQKHLEECGFEEVGGDFTYIPNDLKDVTPEQRETLDKMVERLEEFDDVQTVYTNMKPA SEEEE
Specific function: Unknown
COG id: COG0217
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TACO1 family [H]
Homologues:
Organism=Homo sapiens, GI27545315, Length=225, Percent_Identity=29.3333333333333, Blast_Score=113, Evalue=1e-25, Organism=Escherichia coli, GI1788294, Length=239, Percent_Identity=36.4016736401674, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1788171, Length=233, Percent_Identity=35.6223175965665, Blast_Score=145, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321458, Length=259, Percent_Identity=30.8880308880309, Blast_Score=89, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002876 - InterPro: IPR017856 [H]
Pfam domain/function: PF01709 DUF28 [H]
EC number: NA
Molecular weight: Translated: 27833; Mature: 27702
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAFEYRKATKLKRWGHMAKTFTRLGKQIAIAVKAGGPEPENNPTLRGVIATCKRENMP CCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC KDNIERAIKNAMGKDTSDYKGMTYEGYGPHGVAVFVDTLTDNTTRTVADVRSVFNKFGGN HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC LGTTGSLAFLFDHKCVFTFKKKEGMDMEELILDLIDYNVEDEFDEDEEEGTITIYGDPKS CCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHH YAAIQKHLEECGFEEVGGDFTYIPNDLKDVTPEQRETLDKMVERLEEFDDVQTVYTNMKP HHHHHHHHHHCCHHHHCCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASEEEE CCCCCC >Mature Secondary Structure GRAFEYRKATKLKRWGHMAKTFTRLGKQIAIAVKAGGPEPENNPTLRGVIATCKRENMP CCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC KDNIERAIKNAMGKDTSDYKGMTYEGYGPHGVAVFVDTLTDNTTRTVADVRSVFNKFGGN HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC LGTTGSLAFLFDHKCVFTFKKKEGMDMEELILDLIDYNVEDEFDEDEEEGTITIYGDPKS CCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHH YAAIQKHLEECGFEEVGGDFTYIPNDLKDVTPEQRETLDKMVERLEEFDDVQTVYTNMKP HHHHHHHHHHCCHHHHCCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASEEEE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]