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The map label for this gene is nudC [H]

Identifier: 150005420

GI number: 150005420

Start: 3671780

End: 3672577

Strand: Reverse

Name: nudC [H]

Synonym: BVU_2903

Alternate gene names: 150005420

Gene position: 3672577-3671780 (Counterclockwise)

Preceding gene: 150005421

Following gene: 150005419

Centisome position: 71.13

GC content: 49.87

Gene sequence:

>798_bases
ATGGAAGAAGATATAGAAACCTGCGGCTGGTTCGTTTTTTATAAGGATCAGCTGCTGATAGAGAAAAAGAACGGAATGTA
CACCATACCTTTCGGAACAGAGCCTCCCATGCCTGTTCCGGTGGGAAGCACTATCCACACCATCGGAGAGATAGAGGGAC
GCACTGCCAAGACTTTCTCCGTACATGCCCCGGTGCCCGGCAGCGAAAATGACCGCCACCTGATGATGGATCTCCGGAGT
TCATACGACGTATTGCCTTGGGAAGAGTACAATGTGGGTGGCAAAGCCTTCCAGATACTGAATTGGGACAAGAACAGCCG
CTATTGCCCCATGTGCGGCGTACCTACCGTACAGATTTCTCCTATTGCTAAAAAATGCCCCCAATGTCGTCAGGAAATTT
ATCCGCGCATCTCTCCTGCCATCATTGTATTGATACGCCGGGAAGACAGCATACTGCTGGTCCACGCCCGCAACTTCCGG
GGAACCTTCAACGGTTTGGTAGCCGGTTTTCTTGAACCGGGCGAAACTTTGGAGGAATGTGTGCACCGCGAGGTACTGGA
AGAAACAGGACTCCATATCAAAAACCTGAAATATTTCGGCAGCCAGCCGTGGCCTTATCCCAGCGGAATCATGATAGGCT
TCACCGCCGATTATGAAAGCGGAAACATCAAACTACAACAAGAAGAACTGAGTGCCGGCGCTTTCTATACCAAAGACAAC
TTGCCGGAGATACCCAAAAAGCTGAGCCTGGCAAGAAAACTGATTGATGCGTGGCTGGAGGAAAAGAATCATTTATAG

Upstream 100 bases:

>100_bases
CATGTACGAGTGAAAGTGATGAGCATAGACCTAGAGCGCAAGCGCATCCAGCTCACTATGAAAGGATTGAATCAATAATT
GCAACAAGGTAAAAAAGAAT

Downstream 100 bases:

>100_bases
AACGAGATGAGTCATGTTCCATCCATAAATACCTATTTATCGCTTGCAGAACTTAAAAATGTACTATCTTTGCAATATGG
AATGGTTAAATAGCTTATTT

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MEEDIETCGWFVFYKDQLLIEKKNGMYTIPFGTEPPMPVPVGSTIHTIGEIEGRTAKTFSVHAPVPGSENDRHLMMDLRS
SYDVLPWEEYNVGGKAFQILNWDKNSRYCPMCGVPTVQISPIAKKCPQCRQEIYPRISPAIIVLIRREDSILLVHARNFR
GTFNGLVAGFLEPGETLEECVHREVLEETGLHIKNLKYFGSQPWPYPSGIMIGFTADYESGNIKLQQEELSAGAFYTKDN
LPEIPKKLSLARKLIDAWLEEKNHL

Sequences:

>Translated_265_residues
MEEDIETCGWFVFYKDQLLIEKKNGMYTIPFGTEPPMPVPVGSTIHTIGEIEGRTAKTFSVHAPVPGSENDRHLMMDLRS
SYDVLPWEEYNVGGKAFQILNWDKNSRYCPMCGVPTVQISPIAKKCPQCRQEIYPRISPAIIVLIRREDSILLVHARNFR
GTFNGLVAGFLEPGETLEECVHREVLEETGLHIKNLKYFGSQPWPYPSGIMIGFTADYESGNIKLQQEELSAGAFYTKDN
LPEIPKKLSLARKLIDAWLEEKNHL
>Mature_265_residues
MEEDIETCGWFVFYKDQLLIEKKNGMYTIPFGTEPPMPVPVGSTIHTIGEIEGRTAKTFSVHAPVPGSENDRHLMMDLRS
SYDVLPWEEYNVGGKAFQILNWDKNSRYCPMCGVPTVQISPIAKKCPQCRQEIYPRISPAIIVLIRREDSILLVHARNFR
GTFNGLVAGFLEPGETLEECVHREVLEETGLHIKNLKYFGSQPWPYPSGIMIGFTADYESGNIKLQQEELSAGAFYTKDN
LPEIPKKLSLARKLIDAWLEEKNHL

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=233, Percent_Identity=28.3261802575107, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI50593112, Length=233, Percent_Identity=28.3261802575107, Blast_Score=100, Evalue=1e-21,
Organism=Escherichia coli, GI48994995, Length=249, Percent_Identity=36.144578313253, Blast_Score=155, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71986510, Length=163, Percent_Identity=30.6748466257669, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI212645999, Length=162, Percent_Identity=30.8641975308642, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321371, Length=183, Percent_Identity=30.0546448087432, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 30118; Mature: 30118

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEDIETCGWFVFYKDQLLIEKKNGMYTIPFGTEPPMPVPVGSTIHTIGEIEGRTAKTFS
CCCCCCCCEEEEEEECEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
VHAPVPGSENDRHLMMDLRSSYDVLPWEEYNVGGKAFQILNWDKNSRYCPMCGVPTVQIS
EECCCCCCCCCCEEEEEHHCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEC
PIAKKCPQCRQEIYPRISPAIIVLIRREDSILLVHARNFRGTFNGLVAGFLEPGETLEEC
HHHHHCHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHH
VHREVLEETGLHIKNLKYFGSQPWPYPSGIMIGFTADYESGNIKLQQEELSAGAFYTKDN
HHHHHHHHCCCEEEEEHHHCCCCCCCCCCEEEEEEECCCCCCEEEEHHHCCCCCEEECCC
LPEIPKKLSLARKLIDAWLEEKNHL
CHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEEDIETCGWFVFYKDQLLIEKKNGMYTIPFGTEPPMPVPVGSTIHTIGEIEGRTAKTFS
CCCCCCCCEEEEEEECEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
VHAPVPGSENDRHLMMDLRSSYDVLPWEEYNVGGKAFQILNWDKNSRYCPMCGVPTVQIS
EECCCCCCCCCCEEEEEHHCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEC
PIAKKCPQCRQEIYPRISPAIIVLIRREDSILLVHARNFRGTFNGLVAGFLEPGETLEEC
HHHHHCHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHH
VHREVLEETGLHIKNLKYFGSQPWPYPSGIMIGFTADYESGNIKLQQEELSAGAFYTKDN
HHHHHHHHCCCEEEEEHHHCCCCCCCCCCEEEEEEECCCCCCEEEEHHHCCCCCEEECCC
LPEIPKKLSLARKLIDAWLEEKNHL
CHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA