Click here to switch to the map view.

The map label for this gene is yidE [C]

Identifier: 150005419

GI number: 150005419

Start: 3670042

End: 3671703

Strand: Reverse

Name: yidE [C]

Synonym: BVU_2902

Alternate gene names: 150005419

Gene position: 3671703-3670042 (Counterclockwise)

Preceding gene: 150005420

Following gene: 150005418

Centisome position: 71.11

GC content: 49.4

Gene sequence:

>1662_bases
ATGGAATGGTTAAATAGCTTATTTTTTGAACACACGCCTTTACAGGCGGTTGTAATCCTCTCGATTATCATTGCCGTGGG
GCTCGGTTTAGGTAAAATCCACCTGTTTGGCATTTCATTGGGAGTTACCTTCGTCTTTTTTGCCGGTATTCTGGCCGGAC
ACCTGGGATTCTCAATCGACCCGAATATGCTGAATTACGCCGAGAGTTTCGGTCTTGTGCTTTTTGTATACGAACTTGGC
TTGCAGGTAGGTCCCGGCTTTTTCAGTTCATTCCGTAAAGGCGGCGTACAGCTCAATATGCTGGGCATAGGCGTTATTCT
GACAGGTACGGTCATGACGGTGCTTTTCAGCAAACTGGGAGGCATACCGATGAGCGATATGGTAGGCATCCTTTGTGGAG
CCACCACCAATACTCCCGCTTTGGGGGCCGCCCAACAGACATTGAAACAAATGGGGGAACCCGCCAGTGGCGCTGCGTTA
AGTTGCGCCGTAACCTATCCGCTGGGAGTGGTAGGTGTTATTCTGGCCATGCTGCTGGTACGCAAATTATTTGTCCGTCC
CTCAGATATCGACATTCACGAGCACGAGGACACCAATCAGACATTCATTGCCACCTTCAAAGTGCACAATCCCGCCATTT
TCAATAAAAGCATAAAAGAAGTAGCTTTATTAAGCTATCCTAAATTTGTTATCTCCCGTTTATGGCGGGAAGGCACGGTA
AGCATCCCCACTTCAGAAAAAATACTGAAAGAGAATGACCGCCTGCTGGTTATCACCACCGAAAAGGACGCTCCCTCGCT
CACGATTCTTTTCGGCGAACAGGAAAACCAGGATTGGAATAAAGAAGACATCGACTGGAATGCCATAGACAGCCAATTGA
TTTCCAAACATATCGTTATCAGCCGCCCCGAAATAAACGGGAAAAAACTAGGCTCTTTACGTCTGCGCAACAGCTATGGC
ATCAACATCAGCCGTGTGATGCGCAGCGGGGTACAACTGCTTGCCACACCGGGGCTGATCCTCCAACTGGGCGACCGGCT
GACCGTAGTGGGAGAAGCCAAAGCCATAGAGAATGTGGAAAAAGTATTGGGCAATGCGGTTAAAACGTTGAAGGACCCTA
ATCTTGCCGCCATTTTTATAGGTATTGTACTGGGATTGATACTAGGCTCCATCCCTATCGCCATCCCCGGCATCAGCACT
CCCGTTAAATTAGGCCTGGCAGGCGGACCTATCGTAGTAGGAATTCTTATCGGATGCTTTGGCCCCCGTTTCCACCTCAT
CACTTATACCACCCGGAGTGCCAACCTGATGCTGCGCGGTATCGGGTTATCCCTCTATCTGGCTTGCCTGGGACTGGATG
CAGGCGCACATTTCTTCGAGACAGTGATGCGCCCCGAAGGAGCCATCTGGATAGCTGTAGGCTTCGCCATCACCTTTATT
CCAGTAGTCATTATGGCATTAGTGGCCCTCCGCATAAGCCACCTCGACTTCGGAAGCACCTGTGGCATGCTGTGTGGAAG
CATGGCAAACCCTATGGCATTGAACTATGCCAATGACACGTTACCCGGTGATAATCCGGCAGTGAGTTATGCCACCGTAT
ATCCGCTGTCCATGTTCAGCCGGGTCATTATAGCCCAATTAATACTTATGTTTTTTATATAA

Upstream 100 bases:

>100_bases
CTGGAGGAAAAGAATCATTTATAGAACGAGATGAGTCATGTTCCATCCATAAATACCTATTTATCGCTTGCAGAACTTAA
AAATGTACTATCTTTGCAAT

Downstream 100 bases:

>100_bases
TTTCCAGCTATGAACGCTTATAATTCTATCACCCCGGAAACCATACAGGAAGATATGCGATACCTGCAACTGCTGTCGCA
TAGTTTCCCCACTATAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MEWLNSLFFEHTPLQAVVILSIIIAVGLGLGKIHLFGISLGVTFVFFAGILAGHLGFSIDPNMLNYAESFGLVLFVYELG
LQVGPGFFSSFRKGGVQLNMLGIGVILTGTVMTVLFSKLGGIPMSDMVGILCGATTNTPALGAAQQTLKQMGEPASGAAL
SCAVTYPLGVVGVILAMLLVRKLFVRPSDIDIHEHEDTNQTFIATFKVHNPAIFNKSIKEVALLSYPKFVISRLWREGTV
SIPTSEKILKENDRLLVITTEKDAPSLTILFGEQENQDWNKEDIDWNAIDSQLISKHIVISRPEINGKKLGSLRLRNSYG
INISRVMRSGVQLLATPGLILQLGDRLTVVGEAKAIENVEKVLGNAVKTLKDPNLAAIFIGIVLGLILGSIPIAIPGIST
PVKLGLAGGPIVVGILIGCFGPRFHLITYTTRSANLMLRGIGLSLYLACLGLDAGAHFFETVMRPEGAIWIAVGFAITFI
PVVIMALVALRISHLDFGSTCGMLCGSMANPMALNYANDTLPGDNPAVSYATVYPLSMFSRVIIAQLILMFFI

Sequences:

>Translated_553_residues
MEWLNSLFFEHTPLQAVVILSIIIAVGLGLGKIHLFGISLGVTFVFFAGILAGHLGFSIDPNMLNYAESFGLVLFVYELG
LQVGPGFFSSFRKGGVQLNMLGIGVILTGTVMTVLFSKLGGIPMSDMVGILCGATTNTPALGAAQQTLKQMGEPASGAAL
SCAVTYPLGVVGVILAMLLVRKLFVRPSDIDIHEHEDTNQTFIATFKVHNPAIFNKSIKEVALLSYPKFVISRLWREGTV
SIPTSEKILKENDRLLVITTEKDAPSLTILFGEQENQDWNKEDIDWNAIDSQLISKHIVISRPEINGKKLGSLRLRNSYG
INISRVMRSGVQLLATPGLILQLGDRLTVVGEAKAIENVEKVLGNAVKTLKDPNLAAIFIGIVLGLILGSIPIAIPGIST
PVKLGLAGGPIVVGILIGCFGPRFHLITYTTRSANLMLRGIGLSLYLACLGLDAGAHFFETVMRPEGAIWIAVGFAITFI
PVVIMALVALRISHLDFGSTCGMLCGSMANPMALNYANDTLPGDNPAVSYATVYPLSMFSRVIIAQLILMFFI
>Mature_553_residues
MEWLNSLFFEHTPLQAVVILSIIIAVGLGLGKIHLFGISLGVTFVFFAGILAGHLGFSIDPNMLNYAESFGLVLFVYELG
LQVGPGFFSSFRKGGVQLNMLGIGVILTGTVMTVLFSKLGGIPMSDMVGILCGATTNTPALGAAQQTLKQMGEPASGAAL
SCAVTYPLGVVGVILAMLLVRKLFVRPSDIDIHEHEDTNQTFIATFKVHNPAIFNKSIKEVALLSYPKFVISRLWREGTV
SIPTSEKILKENDRLLVITTEKDAPSLTILFGEQENQDWNKEDIDWNAIDSQLISKHIVISRPEINGKKLGSLRLRNSYG
INISRVMRSGVQLLATPGLILQLGDRLTVVGEAKAIENVEKVLGNAVKTLKDPNLAAIFIGIVLGLILGSIPIAIPGIST
PVKLGLAGGPIVVGILIGCFGPRFHLITYTTRSANLMLRGIGLSLYLACLGLDAGAHFFETVMRPEGAIWIAVGFAITFI
PVVIMALVALRISHLDFGSTCGMLCGSMANPMALNYANDTLPGDNPAVSYATVYPLSMFSRVIIAQLILMFFI

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=549, Percent_Identity=36.976320582878, Blast_Score=355, Evalue=3e-99,
Organism=Escherichia coli, GI1787071, Length=544, Percent_Identity=25.3676470588235, Blast_Score=155, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 59424; Mature: 59424

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLNSLFFEHTPLQAVVILSIIIAVGLGLGKIHLFGISLGVTFVFFAGILAGHLGFSID
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCC
PNMLNYAESFGLVLFVYELGLQVGPGFFSSFRKGGVQLNMLGIGVILTGTVMTVLFSKLG
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHC
GIPMSDMVGILCGATTNTPALGAAQQTLKQMGEPASGAALSCAVTYPLGVVGVILAMLLV
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
RKLFVRPSDIDIHEHEDTNQTFIATFKVHNPAIFNKSIKEVALLSYPKFVISRLWREGTV
HHHHCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCE
SIPTSEKILKENDRLLVITTEKDAPSLTILFGEQENQDWNKEDIDWNAIDSQLISKHIVI
ECCCCHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEE
SRPEINGKKLGSLRLRNSYGINISRVMRSGVQLLATPGLILQLGDRLTVVGEAKAIENVE
ECCCCCCCCCCCEEECCCCCCCHHHHHHCCHHHHCCCCCEEEECCCEEEEECHHHHHHHH
KVLGNAVKTLKDPNLAAIFIGIVLGLILGSIPIAIPGISTPVKLGLAGGPIVVGILIGCF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCHHHHHHHHHCC
GPRFHLITYTTRSANLMLRGIGLSLYLACLGLDAGAHFFETVMRPEGAIWIAVGFAITFI
CCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEHHHHHHHHH
PVVIMALVALRISHLDFGSTCGMLCGSMANPMALNYANDTLPGDNPAVSYATVYPLSMFS
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHH
RVIIAQLILMFFI
HHHHHHHHHHHHC
>Mature Secondary Structure
MEWLNSLFFEHTPLQAVVILSIIIAVGLGLGKIHLFGISLGVTFVFFAGILAGHLGFSID
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCC
PNMLNYAESFGLVLFVYELGLQVGPGFFSSFRKGGVQLNMLGIGVILTGTVMTVLFSKLG
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHC
GIPMSDMVGILCGATTNTPALGAAQQTLKQMGEPASGAALSCAVTYPLGVVGVILAMLLV
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
RKLFVRPSDIDIHEHEDTNQTFIATFKVHNPAIFNKSIKEVALLSYPKFVISRLWREGTV
HHHHCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCE
SIPTSEKILKENDRLLVITTEKDAPSLTILFGEQENQDWNKEDIDWNAIDSQLISKHIVI
ECCCCHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEE
SRPEINGKKLGSLRLRNSYGINISRVMRSGVQLLATPGLILQLGDRLTVVGEAKAIENVE
ECCCCCCCCCCCEEECCCCCCCHHHHHHCCHHHHCCCCCEEEECCCEEEEECHHHHHHHH
KVLGNAVKTLKDPNLAAIFIGIVLGLILGSIPIAIPGISTPVKLGLAGGPIVVGILIGCF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCHHHHHHHHHCC
GPRFHLITYTTRSANLMLRGIGLSLYLACLGLDAGAHFFETVMRPEGAIWIAVGFAITFI
CCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEHHHHHHHHH
PVVIMALVALRISHLDFGSTCGMLCGSMANPMALNYANDTLPGDNPAVSYATVYPLSMFS
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHH
RVIIAQLILMFFI
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]