Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005413
Identifier: 150005413
GI number: 150005413
Start: 3662364
End: 3663794
Strand: Reverse
Name: 150005413
Synonym: BVU_2896
Alternate gene names: NA
Gene position: 3663794-3662364 (Counterclockwise)
Preceding gene: 150005414
Following gene: 150005411
Centisome position: 70.96
GC content: 39.76
Gene sequence:
>1431_bases ATGAAAATCAAATACTTATGCGCATTGTTGTTGGCTGCACTTATTTATAGTTGCGATGATTCAACAACCGGCATCGGGAC TGATCTTATCCCCGGTGGAGATAAGATTCCGGCAAATACAGACAGTTATGAGTTTACCACCAAATCTCTGTTGGCCGACT CTGTTTATGCACGTACCAGTACTGCATATTTAGGACGATATACCGATGAGCAATTTGGAGAATTTACTGCCGACTTTATA GCACAGTTCACCTGTATGGACAACTTCAAATTTGAAGAAGAGCTGACCAAAGTCATCGGAGTAAATATAAGTCTGCAATA CGGGTCTTTCTTTGGTGACTCACTGAATGCCATGCGCTTACAGGTTGACACATTGGACAAGGTTATTCCTGAAAAAGAAC TAAGTACTTTCTATACCAGTGTGGATCCTAAAGATTATTACAACGAAAAAGGAAAGCCTATCGCTGTAAAAGCCTATTCG GCAGTAGGTCCGTCTACAAGCAAAGATGAAACTACAACCACAAGCAGCGGTGTCAAGCAAAGAACAATTATACAGACTAT CAAATTGCCCAATTCATTAGGCGATCACATCTTCAACAAATACAAGGAGAACAAAGAGTATTTCAAGACTCCTGAAAGTT TTATCAAGAATGTATTAAAGGGAGTTTACATTCGCTGTACTCATGGCGACGGAACCATTTTATACATTGACGGTTTAAGC CTGAATCTTAATTTTGAAGCCCTGATAGAAAGTTCTTCCGGCAAGCGGGATTCGTTGGTTTACAAGTCCTATTTCTTTGG AGCAACCAAGGAAGTGATACAAGCCAACCACTTCAGTAACGGTAGCAGATTGGAAGAGTTAGCCCAAGATCCGGACCATA CTTACCTCAAAAGTCCGGCAGGTATTTTTACAGAAGCGACTTTCCCCATTGCAGAGATTTACAATGAACATAAAAGAGAT ACGCTAAATGGTGTAAATGTATCGTTCACACGCTACAACGAGAAAGAGTCCAAATACAAAATGGGCATCCCCCAATATGT ATTGATGGTCAGAAAGAAAGATATGTTCTCGTTCTTTGAAGAAAACAAGATTATCGACAACAAGACTTCTTTCTTAAGTT CATATAGCAGCAGTAACAATACATACACCTTTACCAACATCGCTCCCTTAATCACTTACTGTATTGAGGAACGGAAAAAA GGCATAACAGCAGCAGGTGGAGATCCTGAAAAGGAAGAAGACGGAAAAAAATGGGACGCTGAAAATCCGGACTGGAACAG AGTTGTCATCATACCTGTCAAAGCAGTATCCAATTCAAACAATGAAATAGTTGAAATATCCAACAGCTTAGGTATGGAAA GCGCTATGTTAAAAGGTGGAACGAATCCTGAGAATAAGCTGAAAATGCAAATCTTCTACACTACATTTTAA
Upstream 100 bases:
>100_bases CTCGACTATCAGCCTGCCGATACCTATGTAGATGCTTTCAATGAGTTCTATGACAAAGTATGGGAGTTTGAAAAGAAATA ACTCACTAAGAATAATAAAG
Downstream 100 bases:
>100_bases GACTTTTTTATTTAACCAAATAAAGAACAGGCGGCAACTACAGCAATATAGTTTCCGCCTGTTTAATTTACTCCACCGTA ATCATACCACACCGGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKIKYLCALLLAALIYSCDDSTTGIGTDLIPGGDKIPANTDSYEFTTKSLLADSVYARTSTAYLGRYTDEQFGEFTADFI AQFTCMDNFKFEEELTKVIGVNISLQYGSFFGDSLNAMRLQVDTLDKVIPEKELSTFYTSVDPKDYYNEKGKPIAVKAYS AVGPSTSKDETTTTSSGVKQRTIIQTIKLPNSLGDHIFNKYKENKEYFKTPESFIKNVLKGVYIRCTHGDGTILYIDGLS LNLNFEALIESSSGKRDSLVYKSYFFGATKEVIQANHFSNGSRLEELAQDPDHTYLKSPAGIFTEATFPIAEIYNEHKRD TLNGVNVSFTRYNEKESKYKMGIPQYVLMVRKKDMFSFFEENKIIDNKTSFLSSYSSSNNTYTFTNIAPLITYCIEERKK GITAAGGDPEKEEDGKKWDAENPDWNRVVIIPVKAVSNSNNEIVEISNSLGMESAMLKGGTNPENKLKMQIFYTTF
Sequences:
>Translated_476_residues MKIKYLCALLLAALIYSCDDSTTGIGTDLIPGGDKIPANTDSYEFTTKSLLADSVYARTSTAYLGRYTDEQFGEFTADFI AQFTCMDNFKFEEELTKVIGVNISLQYGSFFGDSLNAMRLQVDTLDKVIPEKELSTFYTSVDPKDYYNEKGKPIAVKAYS AVGPSTSKDETTTTSSGVKQRTIIQTIKLPNSLGDHIFNKYKENKEYFKTPESFIKNVLKGVYIRCTHGDGTILYIDGLS LNLNFEALIESSSGKRDSLVYKSYFFGATKEVIQANHFSNGSRLEELAQDPDHTYLKSPAGIFTEATFPIAEIYNEHKRD TLNGVNVSFTRYNEKESKYKMGIPQYVLMVRKKDMFSFFEENKIIDNKTSFLSSYSSSNNTYTFTNIAPLITYCIEERKK GITAAGGDPEKEEDGKKWDAENPDWNRVVIIPVKAVSNSNNEIVEISNSLGMESAMLKGGTNPENKLKMQIFYTTF >Mature_476_residues MKIKYLCALLLAALIYSCDDSTTGIGTDLIPGGDKIPANTDSYEFTTKSLLADSVYARTSTAYLGRYTDEQFGEFTADFI AQFTCMDNFKFEEELTKVIGVNISLQYGSFFGDSLNAMRLQVDTLDKVIPEKELSTFYTSVDPKDYYNEKGKPIAVKAYS AVGPSTSKDETTTTSSGVKQRTIIQTIKLPNSLGDHIFNKYKENKEYFKTPESFIKNVLKGVYIRCTHGDGTILYIDGLS LNLNFEALIESSSGKRDSLVYKSYFFGATKEVIQANHFSNGSRLEELAQDPDHTYLKSPAGIFTEATFPIAEIYNEHKRD TLNGVNVSFTRYNEKESKYKMGIPQYVLMVRKKDMFSFFEENKIIDNKTSFLSSYSSSNNTYTFTNIAPLITYCIEERKK GITAAGGDPEKEEDGKKWDAENPDWNRVVIIPVKAVSNSNNEIVEISNSLGMESAMLKGGTNPENKLKMQIFYTTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53507; Mature: 53507
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKYLCALLLAALIYSCDDSTTGIGTDLIPGGDKIPANTDSYEFTTKSLLADSVYARTS CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC TAYLGRYTDEQFGEFTADFIAQFTCMDNFKFEEELTKVIGVNISLQYGSFFGDSLNAMRL HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEE QVDTLDKVIPEKELSTFYTSVDPKDYYNEKGKPIAVKAYSAVGPSTSKDETTTTSSGVKQ EHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH RTIIQTIKLPNSLGDHIFNKYKENKEYFKTPESFIKNVLKGVYIRCTHGDGTILYIDGLS HHHHHHHHCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCEEEEEECCCCEEEEEECEE LNLNFEALIESSSGKRDSLVYKSYFFGATKEVIQANHFSNGSRLEELAQDPDHTYLKSPA EECCHHEEEECCCCCCCCEEEHHHHHCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCC GIFTEATFPIAEIYNEHKRDTLNGVNVSFTRYNEKESKYKMGIPQYVLMVRKKDMFSFFE CCEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHH ENKIIDNKTSFLSSYSSSNNTYTFTNIAPLITYCIEERKKGITAAGGDPEKEEDGKKWDA CCCCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC ENPDWNRVVIIPVKAVSNSNNEIVEISNSLGMESAMLKGGTNPENKLKMQIFYTTF CCCCCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MKIKYLCALLLAALIYSCDDSTTGIGTDLIPGGDKIPANTDSYEFTTKSLLADSVYARTS CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC TAYLGRYTDEQFGEFTADFIAQFTCMDNFKFEEELTKVIGVNISLQYGSFFGDSLNAMRL HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEE QVDTLDKVIPEKELSTFYTSVDPKDYYNEKGKPIAVKAYSAVGPSTSKDETTTTSSGVKQ EHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHH RTIIQTIKLPNSLGDHIFNKYKENKEYFKTPESFIKNVLKGVYIRCTHGDGTILYIDGLS HHHHHHHHCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCEEEEEECCCCEEEEEECEE LNLNFEALIESSSGKRDSLVYKSYFFGATKEVIQANHFSNGSRLEELAQDPDHTYLKSPA EECCHHEEEECCCCCCCCEEEHHHHHCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCC GIFTEATFPIAEIYNEHKRDTLNGVNVSFTRYNEKESKYKMGIPQYVLMVRKKDMFSFFE CCEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHH ENKIIDNKTSFLSSYSSSNNTYTFTNIAPLITYCIEERKKGITAAGGDPEKEEDGKKWDA CCCCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC ENPDWNRVVIIPVKAVSNSNNEIVEISNSLGMESAMLKGGTNPENKLKMQIFYTTF CCCCCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA