Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is glgA [H]
Identifier: 150005414
GI number: 150005414
Start: 3663814
End: 3664638
Strand: Reverse
Name: glgA [H]
Synonym: BVU_2897
Alternate gene names: 150005414
Gene position: 3664638-3663814 (Counterclockwise)
Preceding gene: 150005417
Following gene: 150005413
Centisome position: 70.98
GC content: 42.79
Gene sequence:
>825_bases ATGAAGGCAAATAAAGTTTTATTTATTACACAAGAGATTACCCCTTACGTTCCCGAATCCGAAATGGCAAACATGGGAAG ATTTCTTCCTCAGGCTATTCAGGAAAAAGGCAGAGAAATCAGAACTTTTATGCCAAAATGGGGCAATGTCAATGAGCGCA GAAACCAATTACACGAAGTCATCCGCCTGTCCGGCATGAATTTAATCATAGACGATACGGACCATCCGCTGATTATCAAG GTAGCATCTATCCAAGCTGCACGTATGCAGGTTTACTTCATTGACAATGACGACTATTTCCAGCACCGCCAAATGGTAGC TGACGAAAACGGTGTAGAATACAAAGACAATGACGAACGTGCTATTTTTTATGCACGCGGCGTATTGGAAACGGTAAAGA AATTACGCTGGTGTCCGGACATTATCCATTGCCAAGGGTGGATGAGTGCATTTGTACCTCTTTATATCAAGAAGGCTTAT CAGGATGAACCGTCATTCAGAGACTCAAAAGTAGTATTTTCGGTGTTTGAAGATGATTTCAAATCGGACTGCGAAGGTAA TCTGACTGAAAAACTCATGCTGAAAGGCATTGAAAAGAATGATGTGGAAAGCATCGTCAAATCTCCGGCAAATTACGAGG AGCTGTGCAAACTGGCCATTGCCTACTCCGACGGTGTGATACAAAACAGCGAAAAAGTGAACGAGAATGTCATGAAGTTC GCCCGTGAATCGGGTGTGCCCGTGCTCGACTATCAGCCTGCCGATACCTATGTAGATGCTTTCAATGAGTTCTATGACAA AGTATGGGAGTTTGAAAAGAAATAA
Upstream 100 bases:
>100_bases ACTTAACATATCATAAGGAATTATTATTCCTCGTTTCTTGCCACTCTCATCTATTTTTTTTATATCTTTGCAAAATGATT ATGAGCAACAAAAAGTTAAG
Downstream 100 bases:
>100_bases CTCACTAAGAATAATAAAGATGAAAATCAAATACTTATGCGCATTGTTGTTGGCTGCACTTATTTATAGTTGCGATGATT CAACAACCGGCATCGGGACT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKANKVLFITQEITPYVPESEMANMGRFLPQAIQEKGREIRTFMPKWGNVNERRNQLHEVIRLSGMNLIIDDTDHPLIIK VASIQAARMQVYFIDNDDYFQHRQMVADENGVEYKDNDERAIFYARGVLETVKKLRWCPDIIHCQGWMSAFVPLYIKKAY QDEPSFRDSKVVFSVFEDDFKSDCEGNLTEKLMLKGIEKNDVESIVKSPANYEELCKLAIAYSDGVIQNSEKVNENVMKF ARESGVPVLDYQPADTYVDAFNEFYDKVWEFEKK
Sequences:
>Translated_274_residues MKANKVLFITQEITPYVPESEMANMGRFLPQAIQEKGREIRTFMPKWGNVNERRNQLHEVIRLSGMNLIIDDTDHPLIIK VASIQAARMQVYFIDNDDYFQHRQMVADENGVEYKDNDERAIFYARGVLETVKKLRWCPDIIHCQGWMSAFVPLYIKKAY QDEPSFRDSKVVFSVFEDDFKSDCEGNLTEKLMLKGIEKNDVESIVKSPANYEELCKLAIAYSDGVIQNSEKVNENVMKF ARESGVPVLDYQPADTYVDAFNEFYDKVWEFEKK >Mature_274_residues MKANKVLFITQEITPYVPESEMANMGRFLPQAIQEKGREIRTFMPKWGNVNERRNQLHEVIRLSGMNLIIDDTDHPLIIK VASIQAARMQVYFIDNDDYFQHRQMVADENGVEYKDNDERAIFYARGVLETVKKLRWCPDIIHCQGWMSAFVPLYIKKAY QDEPSFRDSKVVFSVFEDDFKSDCEGNLTEKLMLKGIEKNDVESIVKSPANYEELCKLAIAYSDGVIQNSEKVNENVMKF ARESGVPVLDYQPADTYVDAFNEFYDKVWEFEKK
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 31932; Mature: 31932
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKANKVLFITQEITPYVPESEMANMGRFLPQAIQEKGREIRTFMPKWGNVNERRNQLHEV CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHH IRLSGMNLIIDDTDHPLIIKVASIQAARMQVYFIDNDDYFQHRQMVADENGVEYKDNDER HHHCCCEEEEECCCCCEEEEEECEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCE AIFYARGVLETVKKLRWCPDIIHCQGWMSAFVPLYIKKAYQDEPSFRDSKVVFSVFEDDF EEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KSDCEGNLTEKLMLKGIEKNDVESIVKSPANYEELCKLAIAYSDGVIQNSEKVNENVMKF HCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ARESGVPVLDYQPADTYVDAFNEFYDKVWEFEKK HHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKANKVLFITQEITPYVPESEMANMGRFLPQAIQEKGREIRTFMPKWGNVNERRNQLHEV CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHH IRLSGMNLIIDDTDHPLIIKVASIQAARMQVYFIDNDDYFQHRQMVADENGVEYKDNDER HHHCCCEEEEECCCCCEEEEEECEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCE AIFYARGVLETVKKLRWCPDIIHCQGWMSAFVPLYIKKAYQDEPSFRDSKVVFSVFEDDF EEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KSDCEGNLTEKLMLKGIEKNDVESIVKSPANYEELCKLAIAYSDGVIQNSEKVNENVMKF HCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ARESGVPVLDYQPADTYVDAFNEFYDKVWEFEKK HHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA