Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
---|---|
Accession | NC_009614 |
Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150005248
Identifier: 150005248
GI number: 150005248
Start: 3464592
End: 3465167
Strand: Reverse
Name: 150005248
Synonym: BVU_2720
Alternate gene names: NA
Gene position: 3465167-3464592 (Counterclockwise)
Preceding gene: 150005250
Following gene: 150005247
Centisome position: 67.11
GC content: 45.66
Gene sequence:
>576_bases ATGGACAGCACAAAGATTGTTGGTGAAAAAATAAAATCACTACGTGAAACAAAAGAAATCAGTGTGGCCGAACTGGCCGT ACGCTCTGGCCTTGCCGAAGAACAAATAGAACGAATAGAGAATAATGTAGATCTTCCTTCATTGGCTCCCCTCATCAAGA TAGCCCGCGCGTTAGGGGTACGTCTGGGCACTTTTCTGGACGACCAGGAAGAACAAGGAGCAGTAATCTGCCGGAAACAA GAGAGTGAGGATACTATCAGTTTCTCGAACAATGCAATGGACCTGCGTACACATATGCGCTACCACTCACTGTCAAAATC AAAAGCGGACAGGCATATGGAACCATTCATCGTAGACGTGGAACCGACGGAGGAAAGCCACTTCTCACTCTCCTCGCATG AAGGTGAAGAGTTTATCTATGTCATGGAAGGCGCCGTCGAAGTATGCCACGGTAAAAAATGCCATCTGATTAAAGCCGGA GACAGTATTTATTATGATTCTATCGTTCCGCACCACGTACACGGATATCAAGGACAAGCCGCCAAAATATTGGCTGTTAT CTATACTCCTATTTGA
Upstream 100 bases:
>100_bases AACCTGCCTTTTTTACATATTCAGAACAAAAACAGAGTGCCCAATTCTTTTTTATTATATATTTGCACTTTATACTTTGC AAACTTATTAAAAACAAACC
Downstream 100 bases:
>100_bases TTTATGATGGAATTAAGCACGAGAACCTTGGGTGACTGGCTTGAACATTGGGCCCTCACCACTCCCGATAAAGAATATAT CGTATATTCCGACCGCAATC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; HTH-Type Transcriptional Regulator; Cupin 2 Conserved Barrel Domain Protein; MerR Family Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator MerR Family; Transcriptional Regulator Protein; Cupin Domain Protein; Transcription Regulator; Phosphate Butyryltransferase; Cupin 2 Barrel Domain-Containing Protein; Transcriptional Regulator Merr Family; Helix-Turn-Helix Transcriptional Regulator PuuR; Cupin Sensor Transcriptional Regulator; Transcriptional Regulator-Like Protein; Transcriptional Regulator Cro/CI Family Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator Xre Family; Epoxidase; Helix-Turn-Helix/Cupin Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family Protein; Helix-Turn-Helix Transcriptional Regulator; Phosphotransbutyrylase; Helix-Turn-Helix Family Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MDSTKIVGEKIKSLRETKEISVAELAVRSGLAEEQIERIENNVDLPSLAPLIKIARALGVRLGTFLDDQEEQGAVICRKQ ESEDTISFSNNAMDLRTHMRYHSLSKSKADRHMEPFIVDVEPTEESHFSLSSHEGEEFIYVMEGAVEVCHGKKCHLIKAG DSIYYDSIVPHHVHGYQGQAAKILAVIYTPI
Sequences:
>Translated_191_residues MDSTKIVGEKIKSLRETKEISVAELAVRSGLAEEQIERIENNVDLPSLAPLIKIARALGVRLGTFLDDQEEQGAVICRKQ ESEDTISFSNNAMDLRTHMRYHSLSKSKADRHMEPFIVDVEPTEESHFSLSSHEGEEFIYVMEGAVEVCHGKKCHLIKAG DSIYYDSIVPHHVHGYQGQAAKILAVIYTPI >Mature_191_residues MDSTKIVGEKIKSLRETKEISVAELAVRSGLAEEQIERIENNVDLPSLAPLIKIARALGVRLGTFLDDQEEQGAVICRKQ ESEDTISFSNNAMDLRTHMRYHSLSKSKADRHMEPFIVDVEPTEESHFSLSSHEGEEFIYVMEGAVEVCHGKKCHLIKAG DSIYYDSIVPHHVHGYQGQAAKILAVIYTPI
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21391; Mature: 21391
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTKIVGEKIKSLRETKEISVAELAVRSGLAEEQIERIENNVDLPSLAPLIKIARALGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH RLGTFLDDQEEQGAVICRKQESEDTISFSNNAMDLRTHMRYHSLSKSKADRHMEPFIVDV HHHHHCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE EPTEESHFSLSSHEGEEFIYVMEGAVEVCHGKKCHLIKAGDSIYYDSIVPHHVHGYQGQA CCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEEEECCCCEEECCCCCCCCCCCCCCH AKILAVIYTPI HEEEEEEEECC >Mature Secondary Structure MDSTKIVGEKIKSLRETKEISVAELAVRSGLAEEQIERIENNVDLPSLAPLIKIARALGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH RLGTFLDDQEEQGAVICRKQESEDTISFSNNAMDLRTHMRYHSLSKSKADRHMEPFIVDV HHHHHCCCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE EPTEESHFSLSSHEGEEFIYVMEGAVEVCHGKKCHLIKAGDSIYYDSIVPHHVHGYQGQA CCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEEEECCCCEEECCCCCCCCCCCCCCH AKILAVIYTPI HEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA