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The map label for this gene is rbn [C]

Identifier: 150005250

GI number: 150005250

Start: 3466107

End: 3467435

Strand: Reverse

Name: rbn [C]

Synonym: BVU_2722

Alternate gene names: 150005250

Gene position: 3467435-3466107 (Counterclockwise)

Preceding gene: 150005251

Following gene: 150005248

Centisome position: 67.16

GC content: 45.52

Gene sequence:

>1329_bases
ATGAGTACCATGAACAAGGAAAAACTGAAAGGTCTGCAATCGTTTCTCAAAGATGATATATGGCGGGTGACAGAAGACGA
GGTTAGCAAATCCCGAGGAATACTCTATAATGCAATAAAAATCGCTACTCTTTCTGTTCGTGAATTCACTCAGGGACGTA
TTTTGAATAAAGCATCCGCACTGACATACAGCACCCTGCTTTCTATCATTCCCATTCTGGCCATTTTATTCGCCATCGCA
CGCGGTTTCGGCTTCTCCAACCTGCTGGAAACCCAGTTCCGTAGCGGTCTTGAAGGACAGAGTGCGGCTGCCGAAACCAT
TCTTGGCCTGATTGACTCCTATCTGGTGCACGCCAAAAGCGGAATTTTTATCGGAGTGGGTCTGGTGATGTTGTTCTGGA
CCATTCTGAGCCTGACCTATAACATAGAACGTACCTTCAATTATATATGGCAAGTGAAGAAGCCCCGTACACTGTATCGC
AAAATGACGGATTATTTCTCCATCCTGCTCTTACTGCCCCTACTTATCGTACTTTCCAGCGGTCTTACCATCTTTATGTC
CACCATGGTGAAAAACATGGAGGACTTCGTATTACTGGCACCCCTGATGAAATTTCTGGTACGCCTGATCCCTTTCATCC
TGACTTGGGCCATGTTTACGGGACTGTTCGTCTTTATGCCCAATACTAAAGTGAAACTGAAGTATGCCATCATTCCGGGT
ATCATCGCAGGCACAGCCTTTCAGGCTTTTCAATACTTGTATATCGGCAGTCAGATATGGGTATCAAGGTACAATGCAAT
CTATGGTAGCTTCGCCGCCATTCCTATGTTCTTGTTATGGGCGCAGATTTCATGGGGAATCTGCCTGTATGGCGCAGAAC
TTTGCTATGTGGCACAGAATCTTCGCAACTACAGTTTCAGCAAAGAAACGGCAAATATCAGCCGCCGTTATCACGACTTT
CTGTGTATCCTCATCATGTCTCTGATATGCAAGCGCTTTGAGACGGAAGAGGCTCCTTATACCGCCGAGACACTCAGCGA
CGAACATAAAATCCCGATAAGGCTCACCAAGAAAATCCTGTATGAACTACAGGACATGCACATGATTTATGAAACTGCTA
TGGACGGTGACGATGAAAGCATAGGCTATTTGCCGTCAGTAGATATCAACCGGATGAACGTGGCTATGCTGCTGAACAGA
CTGGACATAGCCGGAACGGAAGCCTTCAAAATAGACAAAAAGCGATACAGCAGTTCTTGGGAGGCGCTGGCAAATGCCCG
TGAAGAATATTATAAAAGCACCAGCAAGATATTGCTGAAAGATTTATAA

Upstream 100 bases:

>100_bases
ACAGGCGTAGATAAATGGCAGGCACTTCGCCGCAAGGCGAGGAACAGAACCCGGCTTACAGGCCGGCTGCTTTTTTTTCA
TATATCCTAATGAAGAGCTT

Downstream 100 bases:

>100_bases
TTCTGATATTCGATTTTACCACAGATTGCACAGATTCTTTTTTGCTCAAAAGCCGATGCGGATAATTCCGGATTTCCACA
AAGAAGTTTCTTTCATCTTC

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSTMNKEKLKGLQSFLKDDIWRVTEDEVSKSRGILYNAIKIATLSVREFTQGRILNKASALTYSTLLSIIPILAILFAIA
RGFGFSNLLETQFRSGLEGQSAAAETILGLIDSYLVHAKSGIFIGVGLVMLFWTILSLTYNIERTFNYIWQVKKPRTLYR
KMTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFVLLAPLMKFLVRLIPFILTWAMFTGLFVFMPNTKVKLKYAIIPG
IIAGTAFQAFQYLYIGSQIWVSRYNAIYGSFAAIPMFLLWAQISWGICLYGAELCYVAQNLRNYSFSKETANISRRYHDF
LCILIMSLICKRFETEEAPYTAETLSDEHKIPIRLTKKILYELQDMHMIYETAMDGDDESIGYLPSVDINRMNVAMLLNR
LDIAGTEAFKIDKKRYSSSWEALANAREEYYKSTSKILLKDL

Sequences:

>Translated_442_residues
MSTMNKEKLKGLQSFLKDDIWRVTEDEVSKSRGILYNAIKIATLSVREFTQGRILNKASALTYSTLLSIIPILAILFAIA
RGFGFSNLLETQFRSGLEGQSAAAETILGLIDSYLVHAKSGIFIGVGLVMLFWTILSLTYNIERTFNYIWQVKKPRTLYR
KMTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFVLLAPLMKFLVRLIPFILTWAMFTGLFVFMPNTKVKLKYAIIPG
IIAGTAFQAFQYLYIGSQIWVSRYNAIYGSFAAIPMFLLWAQISWGICLYGAELCYVAQNLRNYSFSKETANISRRYHDF
LCILIMSLICKRFETEEAPYTAETLSDEHKIPIRLTKKILYELQDMHMIYETAMDGDDESIGYLPSVDINRMNVAMLLNR
LDIAGTEAFKIDKKRYSSSWEALANAREEYYKSTSKILLKDL
>Mature_441_residues
STMNKEKLKGLQSFLKDDIWRVTEDEVSKSRGILYNAIKIATLSVREFTQGRILNKASALTYSTLLSIIPILAILFAIAR
GFGFSNLLETQFRSGLEGQSAAAETILGLIDSYLVHAKSGIFIGVGLVMLFWTILSLTYNIERTFNYIWQVKKPRTLYRK
MTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFVLLAPLMKFLVRLIPFILTWAMFTGLFVFMPNTKVKLKYAIIPGI
IAGTAFQAFQYLYIGSQIWVSRYNAIYGSFAAIPMFLLWAQISWGICLYGAELCYVAQNLRNYSFSKETANISRRYHDFL
CILIMSLICKRFETEEAPYTAETLSDEHKIPIRLTKKILYELQDMHMIYETAMDGDDESIGYLPSVDINRMNVAMLLNRL
DIAGTEAFKIDKKRYSSSWEALANAREEYYKSTSKILLKDL

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=257, Percent_Identity=28.4046692607004, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 50576; Mature: 50445

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTMNKEKLKGLQSFLKDDIWRVTEDEVSKSRGILYNAIKIATLSVREFTQGRILNKASA
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTYSTLLSIIPILAILFAIARGFGFSNLLETQFRSGLEGQSAAAETILGLIDSYLVHAKS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
GIFIGVGLVMLFWTILSLTYNIERTFNYIWQVKKPRTLYRKMTDYFSILLLLPLLIVLSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GLTIFMSTMVKNMEDFVLLAPLMKFLVRLIPFILTWAMFTGLFVFMPNTKVKLKYAIIPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEEHHH
IIAGTAFQAFQYLYIGSQIWVSRYNAIYGSFAAIPMFLLWAQISWGICLYGAELCYVAQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LRNYSFSKETANISRRYHDFLCILIMSLICKRFETEEAPYTAETLSDEHKIPIRLTKKIL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHH
YELQDMHMIYETAMDGDDESIGYLPSVDINRMNVAMLLNRLDIAGTEAFKIDKKRYSSSW
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EALANAREEYYKSTSKILLKDL
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STMNKEKLKGLQSFLKDDIWRVTEDEVSKSRGILYNAIKIATLSVREFTQGRILNKASA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTYSTLLSIIPILAILFAIARGFGFSNLLETQFRSGLEGQSAAAETILGLIDSYLVHAKS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
GIFIGVGLVMLFWTILSLTYNIERTFNYIWQVKKPRTLYRKMTDYFSILLLLPLLIVLSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GLTIFMSTMVKNMEDFVLLAPLMKFLVRLIPFILTWAMFTGLFVFMPNTKVKLKYAIIPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEEHHH
IIAGTAFQAFQYLYIGSQIWVSRYNAIYGSFAAIPMFLLWAQISWGICLYGAELCYVAQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LRNYSFSKETANISRRYHDFLCILIMSLICKRFETEEAPYTAETLSDEHKIPIRLTKKIL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHH
YELQDMHMIYETAMDGDDESIGYLPSVDINRMNVAMLLNRLDIAGTEAFKIDKKRYSSSW
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EALANAREEYYKSTSKILLKDL
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA