Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
---|---|
Accession | NC_009567 |
Length | 1,887,192 |
Click here to switch to the map view.
The map label for this gene is 148828037
Identifier: 148828037
GI number: 148828037
Start: 1431516
End: 1432277
Strand: Direct
Name: 148828037
Synonym: CGSHiGG_07790
Alternate gene names: NA
Gene position: 1431516-1432277 (Clockwise)
Preceding gene: 148828036
Following gene: 148828040
Centisome position: 75.85
GC content: 33.86
Gene sequence:
>762_bases ATGGATTTCAATCGAATTATCACTCATATGAATGATCATCATCAAGATGATATGGTTGCCCTTTGTAAAAAATTTGGTGG CGAAAAGGAAATCACAGATGTGACGTTAGTTAATGTAGATTTTGCTGGTTTAGATTTTAAATATAATGGTGGCAAAACAT TACGTGTGGAATTTCCACAACAAGCTGACGAAGGTTCAATTAAACAAGCGATTATCAATCTTTGTGTAGAAAATAAACCA GTTGCAAATTACGATCGTATCAAAGCTAAAATTGATGAATTTCGTCAAGAGTTCAAAAGCTGTGTGCTTGCTACTTTAGA TAAAGATGGCTTACCGATGGCGTCTTATGCACCAATTATTTCGCTTGATGGAAAATATTATATTTATATCAGTGCCATTG CAGAGCATTATGACAATTTAAAACGCAATCCAAATCAAGTGGAAGTGATGTTTTTAGAAGATGAAAACAAAGCAAAATCA ATTATTGTGCGTACTCGCTTACGTTATAAAGCAAGTGCACGTTTTATTCCTCGCAAAGATCCAATTGTTGAACAAGTCTT AGATAAATTAGCAGAAACTATGAATGATGTAGGCGGAATTAAAACGATCCGTGAATTTACTGATTTTGATTTAGTTGAAC TTACATTTGGAACAGGTCGTTTTGTAAGAGGTTTTGGCCAAGCTTATTTGATTGATGCTAATGGGGAAATTTCTCATATT GGTGTCAAAGGCAATCCACACGAAAAAGAAAGTGATAAATAA
Upstream 100 bases:
>100_bases ATGTTAAATCACTTTAACTTGAGTATAATGCTCAGCATTATTTCTATCGGATATGATCCCGTAGAATAATAAAAATTAAT TGTTAATATAAGGAACAAAA
Downstream 100 bases:
>100_bases TATTGTCTCTTAATGAAGATAAAGGGTTGAGTGTAAATTTATACTCACCCCTTTTGTTTACGATAAGTTCGAGTGAAATT GAAATTTCTTTATTTTTTTA
Product: putative heme iron utilization protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MDFNRIITHMNDHHQDDMVALCKKFGGEKEITDVTLVNVDFAGLDFKYNGGKTLRVEFPQQADEGSIKQAIINLCVENKP VANYDRIKAKIDEFRQEFKSCVLATLDKDGLPMASYAPIISLDGKYYIYISAIAEHYDNLKRNPNQVEVMFLEDENKAKS IIVRTRLRYKASARFIPRKDPIVEQVLDKLAETMNDVGGIKTIREFTDFDLVELTFGTGRFVRGFGQAYLIDANGEISHI GVKGNPHEKESDK
Sequences:
>Translated_253_residues MDFNRIITHMNDHHQDDMVALCKKFGGEKEITDVTLVNVDFAGLDFKYNGGKTLRVEFPQQADEGSIKQAIINLCVENKP VANYDRIKAKIDEFRQEFKSCVLATLDKDGLPMASYAPIISLDGKYYIYISAIAEHYDNLKRNPNQVEVMFLEDENKAKS IIVRTRLRYKASARFIPRKDPIVEQVLDKLAETMNDVGGIKTIREFTDFDLVELTFGTGRFVRGFGQAYLIDANGEISHI GVKGNPHEKESDK >Mature_253_residues MDFNRIITHMNDHHQDDMVALCKKFGGEKEITDVTLVNVDFAGLDFKYNGGKTLRVEFPQQADEGSIKQAIINLCVENKP VANYDRIKAKIDEFRQEFKSCVLATLDKDGLPMASYAPIISLDGKYYIYISAIAEHYDNLKRNPNQVEVMFLEDENKAKS IIVRTRLRYKASARFIPRKDPIVEQVLDKLAETMNDVGGIKTIREFTDFDLVELTFGTGRFVRGFGQAYLIDANGEISHI GVKGNPHEKESDK
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 28745; Mature: 28745
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFNRIITHMNDHHQDDMVALCKKFGGEKEITDVTLVNVDFAGLDFKYNGGKTLRVEFPQ CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECEEEEECCCEEEEEECCC QADEGSIKQAIINLCVENKPVANYDRIKAKIDEFRQEFKSCVLATLDKDGLPMASYAPII CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE SLDGKYYIYISAIAEHYDNLKRNPNQVEVMFLEDENKAKSIIVRTRLRYKASARFIPRKD EECCEEEEEEHHHHHHHHHHCCCCCEEEEEEEECCCCCHHEEEHHHHHHHHCCCCCCCCC PIVEQVLDKLAETMNDVGGIKTIREFTDFDLVELTFGTGRFVRGFGQAYLIDANGEISHI HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEEEECCCCEEEE GVKGNPHEKESDK ECCCCCCCCCCCC >Mature Secondary Structure MDFNRIITHMNDHHQDDMVALCKKFGGEKEITDVTLVNVDFAGLDFKYNGGKTLRVEFPQ CCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECEEEEECCCEEEEEECCC QADEGSIKQAIINLCVENKPVANYDRIKAKIDEFRQEFKSCVLATLDKDGLPMASYAPII CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE SLDGKYYIYISAIAEHYDNLKRNPNQVEVMFLEDENKAKSIIVRTRLRYKASARFIPRKD EECCEEEEEEHHHHHHHHHHCCCCCEEEEEEEECCCCCHHEEEHHHHHHHHCCCCCCCCC PIVEQVLDKLAETMNDVGGIKTIREFTDFDLVELTFGTGRFVRGFGQAYLIDANGEISHI HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEEEECCCCEEEE GVKGNPHEKESDK ECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]