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The map label for this gene is rplQ

Identifier: 148827994

GI number: 148827994

Start: 1385213

End: 1386022

Strand: Direct

Name: rplQ

Synonym: CGSHiGG_07525

Alternate gene names: NA

Gene position: 1385213-1386022 (Clockwise)

Preceding gene: 148827992

Following gene: 148828008

Centisome position: 73.4

GC content: 34.32

Gene sequence:

>810_bases
ATGGCGTTTAGTACAATTTTTATCTTACTGATTTGCGGTATTTGTACCAATATGGTTTCTGCTATTTTTGGTATTGGCGG
TGGGGTATTGATGGTGCCAATTTTACGTACGTTATTTCCCGAATTGCCGATTCAAGTTATTTCAGCTACGTCACTCACTA
TTGTGATGTGTACCGCATTGATTAATTTATTATTTTTCTATAAGCAAAAAATCAAAATTGATTATATCAATATGATTTTA
TGGTCTATTGCTATGGTGATTGGGGTGCAAATTGGTTTTGAATTAAGTTTTTATTTTTCTACAGCGATAATTAGTTTAAT
TTTTACGGTTAGTTTAAGTGCACTAGCGATTAAAACATTTTTGAACAGATCGAGAATACAAATAGAAGTGTTTAATATGT
CTCCTATAGAACGAGCTAAAGGTAGTATTAGTTTTTGTGGAGGAGGCTTAATTGCGGGTATTACAGGTATTGGAGGCGGT
TCTATTCTTGCGCCCCTTGTCGGGCAATTAAAGGGGGTAAAAACGCAACAAATTGCCGTTTATACGAACTATATGATGAT
TATTGGCGGTATTGGTAATCTATACGGCTATCTCACTAGAGCTTTTCCCTATGATATCAGCCTAAGTGGTCAATTAGGGT
ATGTAAATTTTTTTGTAGTTGGTGTCGTTACCTTGGGTTCATTTGGAATGAGTTTCTTCTCAATGAAATTGCGTGGATTA
ATGAATCCGGCTTTAACAAGAAAATTATTGGCGATTATTTTATTTTGTATTGCAGCCTATATGTGCATTTTGGAATTTGT
ATTCCATTAA

Upstream 100 bases:

>100_bases
CAGAATAATTTTAACTGTATATGATAGCGATCATAAGTTGCGCATATGCTCTTACGTCAAAATGAAGTATGATTAAATGA
ATTTTTAAATAGGATCTAAG

Downstream 100 bases:

>100_bases
ATCGAATAAACTAGACCTAGTTATTCTAGGTCTATTCTCTAATTAGTGTTTTCGCAATCTCTCTTGCTTGTGCATCAATT
TCGAGTACATCATCAATATT

Product: 50S ribosomal protein L17

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MAFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALINLLFFYKQKIKIDYINMIL
WSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGG
SILAPLVGQLKGVKTQQIAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKLRGL
MNPALTRKLLAIILFCIAAYMCILEFVFH

Sequences:

>Translated_269_residues
MAFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALINLLFFYKQKIKIDYINMIL
WSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGG
SILAPLVGQLKGVKTQQIAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKLRGL
MNPALTRKLLAIILFCIAAYMCILEFVFH
>Mature_268_residues
AFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALINLLFFYKQKIKIDYINMILW
SIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGS
ILAPLVGQLKGVKTQQIAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKLRGLM
NPALTRKLLAIILFCIAAYMCILEFVFH

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 29273; Mature: 29142

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTAL
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
INLLFFYKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQIAV
HCCCEEEEEEECCCCHHHCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEH
YTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKLRGL
HHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNPALTRKLLAIILFCIAAYMCILEFVFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTAL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
INLLFFYKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQIAV
HCCCEEEEEEECCCCHHHCCCCCEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEH
YTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKLRGL
HHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNPALTRKLLAIILFCIAAYMCILEFVFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]