Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
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Accession | NC_009567 |
Length | 1,887,192 |
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The map label for this gene is ilvD [H]
Identifier: 148827928
GI number: 148827928
Start: 1324715
End: 1326553
Strand: Direct
Name: ilvD [H]
Synonym: CGSHiGG_07165
Alternate gene names: 148827928
Gene position: 1324715-1326553 (Clockwise)
Preceding gene: 148827927
Following gene: 148827931
Centisome position: 70.2
GC content: 43.34
Gene sequence:
>1839_bases ATGCCCAAACTACGTTCAGCGACCAGCACACAAGGTCGTAATATGGCAGGCGCACGTGCCTTATGGCGTGCAACAGGAAT GAAAGAAAATGACTTTGGTAAACCGATTATTGCGGTGGTGAACTCTTTCACGCAATTCGTACCAGGGCATGTGCATTTAA AAGATATGGGACAGCTTGTTGCCGCAGAAATTGAAAAAGCGGGCGGCGTAGCAAAAGAATTCAATACCATTGCGGTGGAT GATGGTATCGCAATGGGGCACGGTGGAATGCTTTATTCTTTGCCAAGCCGTGATTTAATCGCTGATAGCGTGGAATATAT GGTCAATGCGCACTGTGCTGATGCGATGGTGTGTATTTCCAACTGTGACAAAATCACTCCAGGAATGTTGATGGCTGCAA TGCGTTTAAATATTCCAACTATCTTCGTTTCAGGCGGCCCGATGGAAGCAGGTAAAACTAAACTTTCTGATCAATTAATC CGATTAGATTTAGTAGATGCGATGATTGAGGCAGCGGATCCGAATGTATCAGATGAACGTATTGATGCCATTGAACGCAG TGCGTGTCCAACTTGTGGTTCATGCTCAGGTATGTTTACCGCAAACTCTATGAATTGCCTTACTGAAGCCTTAGGTTTAT CTTTACCAGGCAATGGTTCCATGTTAGCTACTCATGCTGACCGCAAAGAATTATTCTTAAAAGCAGGTCGTCAAATTGTC GAGCTTTGCAAACGCTATTATGAACAAGATGATGCAAGCGTATTGCCTCGTTCAATCGGTACTTTTGATGCCTTTGAAAA TGCAATGAGCCTCGATATCGCAATGGGTGGTTCAAGTAACACTGTTTTACACTTATTAGCGGCAGCACAAGAAGCAGGCA TGGATTTTAAAATGGAAGATATTGACCGTTTATCGCGCAAAGTGCCTTGTTTAAGCAAAATTGCACCAAACACCAATAAA TATCATATGGAAGACGTACACCGTGCAGGCGGTATTATGGGATTGTTGGGTGAATTAGATCGTGCTGGATTAATTCATAA AAATACACACACCGTGCTTGGAATGAGCATGGGAGAGCAACTAGACCAATACGATATTATTCGCAATCAAGATGAAGAAT TACATAAATTCTTCCGTGCAGGCCCTGCAGGTATCCGCACAACTCAAGCATTCTCACAAGATTGCCGTTGGGATACCGTT GATAATGATCGTGTAAACGGTTGTATTCGCAACAAAGAAAATGCAATTTCGCAAGAAGGTGGCTTAGCCGTATTATTCGG TAATCTCGCTGAAGACGGATGTATCGTTAAAACCGCTGGTGTAGATGAATCTATTTGGAAATTCACTGGCACAGCAATCG TATTTGAAAGCCAAGAAGATGCGGTTGCAGGTATTTTAGGTGGCAAAGTCAAAGAAGGTCATGTTGTTGTTATCCGTTAC GAAGGGCCTAAAGGCGGACCAGGTATGCAAGAAATGTTATACCCAACCAGTTACTTAAAATCGATGGGCTTGGGCAAAAA ATGCGCTTTATTAACGGATGGTCGCTTCTCTGGCGGTACATCAGGCTTGTCTATTGGACATGCTTCACCAGAAGCTGCTT CTGGCGGTGCAATCGGCTTAGTACGCGATGGCGATATTATCAACATTGATATTCCAAATCGTGCAATTAACTTAGAAATC AGTAATGATGAACTCGCAACACGCAGAGCCGAACAAGATCAAAAAGGTTGGCAGCCAGCTAACCGTGAACGTGAAGTCTC TTTCGCTTTAAAAGTATTCGGTCACTTTGCGACCTCAGCGGACAAAGGTGCGGTACGCGATAAAACATTATTAAAATAA
Upstream 100 bases:
>100_bases TCTGAAGATCTAGAAAATATCTTGCCAGCTGCTATTTTAGAAAACTTTCTACAATATAAGTAATAATATTTACCTTAAAT TTTACTCGGAGAGATTATTT
Downstream 100 bases:
>100_bases TTTAACGGTTCCCCTCTTTCATAAGAGGGGATAAAACAAAGGAAAAACTAACCGCACTTTATCATCAAAACAAACACTAT GAAAAATCTACTCACCAATC
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MPKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVD DGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI RLDLVDAMIEAADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGMDFKMEDIDRLSRKVPCLSKIAPNTNK YHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQLDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTV DNDRVNGCIRNKENAISQEGGLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHASPEAASGGAIGLVRDGDIINIDIPNRAINLEI SNDELATRRAEQDQKGWQPANREREVSFALKVFGHFATSADKGAVRDKTLLK
Sequences:
>Translated_612_residues MPKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVD DGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI RLDLVDAMIEAADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGMDFKMEDIDRLSRKVPCLSKIAPNTNK YHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQLDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTV DNDRVNGCIRNKENAISQEGGLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHASPEAASGGAIGLVRDGDIINIDIPNRAINLEI SNDELATRRAEQDQKGWQPANREREVSFALKVFGHFATSADKGAVRDKTLLK >Mature_611_residues PKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVDD GIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLIR LDLVDAMIEAADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIVE LCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGMDFKMEDIDRLSRKVPCLSKIAPNTNKY HMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQLDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTVD NDRVNGCIRNKENAISQEGGLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRYE GPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHASPEAASGGAIGLVRDGDIINIDIPNRAINLEIS NDELATRRAEQDQKGWQPANREREVSFALKVFGHFATSADKGAVRDKTLLK
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=614, Percent_Identity=77.6872964169381, Blast_Score=1011, Evalue=0.0, Organism=Escherichia coli, GI2367371, Length=560, Percent_Identity=30.3571428571429, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1788157, Length=542, Percent_Identity=29.3357933579336, Blast_Score=191, Evalue=2e-49, Organism=Escherichia coli, GI1786464, Length=523, Percent_Identity=31.7399617590822, Blast_Score=189, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6322476, Length=605, Percent_Identity=36.8595041322314, Blast_Score=346, Evalue=5e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 65815; Mature: 65684
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCIS HHHHHHHCCCHHHCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLIRLDLVDAMIEAADPNVSDER CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV HHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGMDFKMED HHHHHHHCCCCHHHCCHHCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHH IDRLSRKVPCLSKIAPNTNKYHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQ HHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEECCCCEEEECHHHHH LDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTVDNDRVNGCIRNKENAISQEG HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHCCCC GLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY CEEEEECCCCCCCEEEEECCCCHHHHHEECCEEEEECCCCHHHHHHCCCCCCCCEEEEEE EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHASPEAASGGAIGL CCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE VRDGDIINIDIPNRAINLEISNDELATRRAEQDQKGWQPANREREVSFALKVFGHFATSA EECCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DKGAVRDKTLLK CCCCCCCHHCCC >Mature Secondary Structure PKLRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLKDMGQLV CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH AAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCADAMVCIS HHHHHHHCCCHHHCCEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH NCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLIRLDLVDAMIEAADPNVSDER CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHADRKELFLKAGRQIV HHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHH ELCKRYYEQDDASVLPRSIGTFDAFENAMSLDIAMGGSSNTVLHLLAAAQEAGMDFKMED HHHHHHHCCCCHHHCCHHCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHH IDRLSRKVPCLSKIAPNTNKYHMEDVHRAGGIMGLLGELDRAGLIHKNTHTVLGMSMGEQ HHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEECCCCEEEECHHHHH LDQYDIIRNQDEELHKFFRAGPAGIRTTQAFSQDCRWDTVDNDRVNGCIRNKENAISQEG HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHCCCC GLAVLFGNLAEDGCIVKTAGVDESIWKFTGTAIVFESQEDAVAGILGGKVKEGHVVVIRY CEEEEECCCCCCCEEEEECCCCHHHHHEECCEEEEECCCCHHHHHHCCCCCCCCEEEEEE EGPKGGPGMQEMLYPTSYLKSMGLGKKCALLTDGRFSGGTSGLSIGHASPEAASGGAIGL CCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE VRDGDIINIDIPNRAINLEISNDELATRRAEQDQKGWQPANREREVSFALKVFGHFATSA EECCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DKGAVRDKTLLK CCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA