Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is gltX
Identifier: 148824182
GI number: 148824182
Start: 3360514
End: 3361986
Strand: Reverse
Name: gltX
Synonym: TBFG_13007
Alternate gene names: 148824182
Gene position: 3361986-3360514 (Counterclockwise)
Preceding gene: 148824183
Following gene: 148824180
Centisome position: 75.99
GC content: 66.67
Gene sequence:
>1473_bases GTGACCGCCACGGAAACAGTCCGGGTCCGATTCTGCCCTTCACCCACCGGAACTCCGCACGTCGGTCTGGTCCGCACCGC GCTGTTCAACTGGGCCTACGCCCGGCACACCGGTGGCACCTTCGTGTTCCGCATCGAGGACACCGACGCCCAACGCGACA GCGAGGAAAGCTATCTGGCGCTGCTGGACGCGCTGCGCTGGCTTGGCCTGGATTGGGATGAGGGGCCCGAGGTGGGTGGG CCGTACGGGCCGTACCGGCAGTCGCAGCGCGCCGAAATCTACCGTGACGTGCTCGCCCGACTGCTCGCCGCGGGCGAGGC CTACCACGCTTTCTCCACACCCGAGGAAGTGGAGGCCCGTCATGTCGCGGCCGGGCGCAATCCCAAGCTGGGTTACGACA ATTTCGATCGTCACTTGACCGACGCGCAGCGTGCGGCGTACCTGGCGGAGGGCCGCCAGCCGGTGGTGCGGCTGCGGATG CCCGATGACGACCTCGCTTGGAATGACCTGGTGCGCGGGCCCGTGACGTTCGCGGCTGGCTCCGTACCCGACTTCGCGTT GACCCGAGCCAGCGGTGATCCGTTATACACCTTGGTCAACCCGTGCGACGACGCGCTGATGAAGATCACCCATGTGTTGC GTGGCGAGGACCTGCTGCCGTCGACGCCGCGCCAGCTGGCGCTACATCAGGCGTTGATCAGGATCGGGGTAGCTGAGCGG ATTCCGAAATTCGCGCACCTCCCAACGGTCTTGGGGGAGGGCACCAAGAAGCTCTCGAAGCGCGATCCGCAGTCGAACCT GTTTGCCCACCGCGACCGCGGGTTCATCCCCGAAGGCCTGCTGAACTACCTCGCGTTGCTCGGCTGGTCCATAGCCGACG ACCACGACCTGTTCGGTCTCGACGAGATGGTGGCCGCGTTCGACGTTGCCGACGTCAACTCCAGCCCGGCCCGGTTCGAC CAGAAGAAGGCCGACGCGCTGAACGCCGAGCACATCCGGATGCTCGACGTGGGCGACTTCACGGTCAGGCTGCGCGACCA TCTGGATACCCACGGCCATCACATCGCGTTGGATGAGGCGGCATTCGCCGCCGCCGCCGAGTTGGTGCAGACCCGCATCG TGGTGCTCGGTGACGCGTGGGAGCTGTTGAAGTTCTTCAACGACGATCAGTATGTGATCGATCCCAAGGCCGCGGCCAAG GAGCTAGGCCCAGACGGGGCCGCGGTGCTCGACGCGGCCCTGGCCGCGCTGACAAGTGTGACGGACTGGACGGCACCCCT GATCGAGGCGGCCCTTAAGGACGCCTTGATCGAAGGTTTGGCGCTCAAACCCCGCAAGGCGTTCAGCCCCATCCGGGTGG CCGCCACCGGCACGACCGTCAGCCCGCCGTTGTTTGAATCGCTGGAGCTGCTCGGTCGTGACCGCAGCATGCAGCGGCTG CGCGCGGCGCGCCAGCTGGTCGGGCACGCGTGA
Upstream 100 bases:
>100_bases CACCCGCGGGAGTCGGTCCCATCGAGGACGGCGACACCGTCTCGATCACCATCGAGGGAATCGGCACCCTCACCAATCCC GTAGTCCGCAAAGGAAAGCC
Downstream 100 bases:
>100_bases GCCTTGTGTGGCGAATCTTTGGTAGTCTGCACGTCGGCCCATAACAGCTGGCGGCAGCGGTTTTAGGCAGCCCATGGGGT ATGGTGTAATTGGCAACACA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MTATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGG PYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRM PDDDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGLDEMVAAFDVADVNSSPARFD QKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAK ELGPDGAAVLDAALAALTSVTDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL RAARQLVGHA
Sequences:
>Translated_490_residues MTATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGG PYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRM PDDDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGLDEMVAAFDVADVNSSPARFD QKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAK ELGPDGAAVLDAALAALTSVTDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL RAARQLVGHA >Mature_489_residues TATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGGP YGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMP DDDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAERI PKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGLDEMVAAFDVADVNSSPARFDQ KKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKE LGPDGAAVLDAALAALTSVTDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRLR AARQLVGHA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=331, Percent_Identity=38.0664652567976, Blast_Score=201, Evalue=1e-51, Organism=Escherichia coli, GI1788743, Length=488, Percent_Identity=34.4262295081967, Blast_Score=272, Evalue=4e-74, Organism=Escherichia coli, GI226510925, Length=265, Percent_Identity=29.811320754717, Blast_Score=89, Evalue=7e-19, Organism=Caenorhabditis elegans, GI71993394, Length=495, Percent_Identity=29.4949494949495, Blast_Score=204, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6324540, Length=503, Percent_Identity=30.2186878727634, Blast_Score=208, Evalue=2e-54, Organism=Drosophila melanogaster, GI24665321, Length=496, Percent_Identity=32.0564516129032, Blast_Score=218, Evalue=6e-57,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_MYCBO (P0A637)
Other databases:
- EMBL: BX248344 - RefSeq: NP_856661.1 - ProteinModelPortal: P0A637 - SMR: P0A637 - EnsemblBacteria: EBMYCT00000015176 - GeneID: 1094008 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb3016c - GeneTree: EBGT00050000016746 - HOGENOM: HBG628189 - OMA: LPYVMGQ - ProtClustDB: PRK01406 - BioCyc: MBOV233413:MB3016C-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 53865; Mature: 53733
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 260-260
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLA CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH LLDALRWLGLDWDEGPEVGGPYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEAR HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH HVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMPDDDLAWNDLVRGPVTFAAG HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCHHHCCC SVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER CCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGL CCHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH DEMVAAFDVADVNSSPARFDQKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHCCCCCCEEEEHHH AFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKELGPDGAAVLDAALAALTSV HHHHHHHHHHHHHEEECCHHHHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHH TDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHH RAARQLVGHA HHHHHHHCCC >Mature Secondary Structure TATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLA CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH LLDALRWLGLDWDEGPEVGGPYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEAR HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH HVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMPDDDLAWNDLVRGPVTFAAG HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCHHHCCC SVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER CCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGL CCHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH DEMVAAFDVADVNSSPARFDQKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHCCCCCCEEEEHHH AFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKELGPDGAAVLDAALAALTSV HHHHHHHHHHHHHEEECCHHHHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHH TDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHH RAARQLVGHA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972