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The map label for this gene is ycgM [C]

Identifier: 148824183

GI number: 148824183

Start: 3361983

End: 3362702

Strand: Reverse

Name: ycgM [C]

Synonym: TBFG_13008

Alternate gene names: 148824183

Gene position: 3362702-3361983 (Counterclockwise)

Preceding gene: 148824185

Following gene: 148824182

Centisome position: 76.0

GC content: 64.17

Gene sequence:

>720_bases
ATGACGGCCCGCGAGATCGCCGAGCACCCGTTCGGTACGCCGACCTTCACCGGACGCTCCTGGCCGCTGGCCGACGTTCG
CCTGCTGGCTCCGATACTGGCGAGCAAGGTGGTCTGTGTCGGGAAGAACTATGCCGATCACATCGCCGAAATGGGTGGCC
GGCCGCCGGCAGACCCGGTGATATTCCTCAAGCCCAACACCGCGATCATCGGTCCGAATACGCCAATTCGATTGCCCGCC
AACGCATCACCGGTGCACTTCGAGGGTGAGCTGGCGATCGTGATCGGCCGGGCGTGCAAGGATGTCCCGGCCGCCCAGGC
CGTCGACAATATCCTCGGCTACACCATCGGCAATGACGTGTCGGCCCGCGATCAGCAGCAATCCGACGGTCAGTGGACGC
GAGCCAAGGGGCACGACACCTTCTGCCCGGTCGGGCCGTGGATCGTCACCGACCTCGCTCCCTTTGACCCGGCCGATCTC
GAGCTGCGCACCGTCGTCAACGGCGACGTCAAACAGCACGCCCGCACCTCGCTGATGATCCATGACATCGGCGCCATCGT
GGAATGGATCTCGGCGATAATGACCTTGCTGCCAGGTGATCTCATCCTCACCGGCACACCCGCGGGAGTCGGTCCCATCG
AGGACGGCGACACCGTCTCGATCACCATCGAGGGAATCGGCACCCTCACCAATCCCGTAGTCCGCAAAGGAAAGCCGTGA

Upstream 100 bases:

>100_bases
GGGCCCGGCTAAGCTCATCCAAATGCGTATCGGTCGAATCGCCAGCCCGGACGGTGTCGCTTTTGCCAGCATCGACGGCG
AGCTGGGCGAGCCGAGTGAG

Downstream 100 bases:

>100_bases
CCGCCACGGAAACAGTCCGGGTCCGATTCTGCCCTTCACCCACCGGAACTCCGCACGTCGGTCTGGTCCGCACCGCGCTG
TTCAACTGGGCCTACGCCCG

Product: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTAREIAEHPFGTPTFTGRSWPLADVRLLAPILASKVVCVGKNYADHIAEMGGRPPADPVIFLKPNTAIIGPNTPIRLPA
NASPVHFEGELAIVIGRACKDVPAAQAVDNILGYTIGNDVSARDQQQSDGQWTRAKGHDTFCPVGPWIVTDLAPFDPADL
ELRTVVNGDVKQHARTSLMIHDIGAIVEWISAIMTLLPGDLILTGTPAGVGPIEDGDTVSITIEGIGTLTNPVVRKGKP

Sequences:

>Translated_239_residues
MTAREIAEHPFGTPTFTGRSWPLADVRLLAPILASKVVCVGKNYADHIAEMGGRPPADPVIFLKPNTAIIGPNTPIRLPA
NASPVHFEGELAIVIGRACKDVPAAQAVDNILGYTIGNDVSARDQQQSDGQWTRAKGHDTFCPVGPWIVTDLAPFDPADL
ELRTVVNGDVKQHARTSLMIHDIGAIVEWISAIMTLLPGDLILTGTPAGVGPIEDGDTVSITIEGIGTLTNPVVRKGKP
>Mature_238_residues
TAREIAEHPFGTPTFTGRSWPLADVRLLAPILASKVVCVGKNYADHIAEMGGRPPADPVIFLKPNTAIIGPNTPIRLPAN
ASPVHFEGELAIVIGRACKDVPAAQAVDNILGYTIGNDVSARDQQQSDGQWTRAKGHDTFCPVGPWIVTDLAPFDPADLE
LRTVVNGDVKQHARTSLMIHDIGAIVEWISAIMTLLPGDLILTGTPAGVGPIEDGDTVSITIEGIGTLTNPVVRKGKP

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=223, Percent_Identity=41.2556053811659, Blast_Score=167, Evalue=5e-42,
Organism=Homo sapiens, GI40786394, Length=223, Percent_Identity=40.8071748878924, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI13654274, Length=203, Percent_Identity=41.871921182266, Blast_Score=164, Evalue=5e-41,
Organism=Homo sapiens, GI66348062, Length=194, Percent_Identity=42.7835051546392, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI215422413, Length=199, Percent_Identity=41.7085427135678, Blast_Score=162, Evalue=3e-40,
Organism=Escherichia coli, GI1787428, Length=195, Percent_Identity=40.5128205128205, Blast_Score=153, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17557057, Length=194, Percent_Identity=39.1752577319588, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6324161, Length=221, Percent_Identity=32.579185520362, Blast_Score=122, Evalue=3e-29,
Organism=Drosophila melanogaster, GI28572127, Length=220, Percent_Identity=39.0909090909091, Blast_Score=156, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24663695, Length=220, Percent_Identity=34.5454545454545, Blast_Score=124, Evalue=7e-29,
Organism=Drosophila melanogaster, GI28571789, Length=203, Percent_Identity=35.4679802955665, Blast_Score=120, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 25341; Mature: 25210

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAREIAEHPFGTPTFTGRSWPLADVRLLAPILASKVVCVGKNYADHIAEMGGRPPADPV
CCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCCCCCCE
IFLKPNTAIIGPNTPIRLPANASPVHFEGELAIVIGRACKDVPAAQAVDNILGYTIGNDV
EEECCCEEEECCCCCEEECCCCCCEEECCCEEEEEECHHCCCCHHHHHHHHHCCCCCCCC
SARDQQQSDGQWTRAKGHDTFCPVGPWIVTDLAPFDPADLELRTVVNGDVKQHARTSLMI
CCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
HDIGAIVEWISAIMTLLPGDLILTGTPAGVGPIEDGDTVSITIEGIGTLTNPVVRKGKP
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCC
>Mature Secondary Structure 
TAREIAEHPFGTPTFTGRSWPLADVRLLAPILASKVVCVGKNYADHIAEMGGRPPADPV
CHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCCCCCCE
IFLKPNTAIIGPNTPIRLPANASPVHFEGELAIVIGRACKDVPAAQAVDNILGYTIGNDV
EEECCCEEEECCCCCEEECCCCCCEEECCCEEEEEECHHCCCCHHHHHHHHHCCCCCCCC
SARDQQQSDGQWTRAKGHDTFCPVGPWIVTDLAPFDPADLELRTVVNGDVKQHARTSLMI
CCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
HDIGAIVEWISAIMTLLPGDLILTGTPAGVGPIEDGDTVSITIEGIGTLTNPVVRKGKP
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]