Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is mpb83
Identifier: 148824063
GI number: 148824063
Start: 3195435
End: 3196097
Strand: Direct
Name: mpb83
Synonym: TBFG_12888
Alternate gene names: 148824063
Gene position: 3195435-3196097 (Clockwise)
Preceding gene: 148824062
Following gene: 148824064
Centisome position: 72.22
GC content: 63.5
Gene sequence:
>663_bases ATGATCAACGTTCAGGCCAAACCGGCCGCAGCAGCGAGCCTCGCAGCCATCGCGATTGCGTTCTTAGCGGGTTGTTCGAG CACCAAACCCGTGTCGCAAGACACCAGCCCGAAACCGGCGACCAGCCCGGCGGCGCCCGTTACCACGGCGGCAATGGCTG ACCCCGCAGCGGACCTGATTGGTCGTGGGTGCGCGCAATACGCGGCGCAAAATCCCACCGGTCCCGGATCGGTGGCCGGA ATGGCGCAAGACCCGGTCGCTACCGCGGCTTCCAACAACCCGATGCTCAGTACCCTGACCTCGGCTCTGTCGGGCAAGCT GAACCCGGATGTGAATCTGGTCGACACCCTCAACGGCGGCGAGTACACCGTTTTCGCCCCCACCAACGCCGCATTCGACA AGCTGCCGGCGGCCACTATCGATCAACTCAAGACTGACGCCAAGCTGCTCAGCAGCATCCTGACCTACCACGTGATAGCC GGCCAGGCGAGTCCGAGCAGGATCGACGGCACCCATCAGACCCTGCAAGGTGCCGACCTGACGGTGATAGGCGCCCGCGA CGACCTCATGGTCAACAACGCCGGTTTGGTATGTGGCGGAGTTCACACCGCCAACGCGACGGTGTACATGATCGATACGG TGCTGATGCCCCCGGCACAGTAA
Upstream 100 bases:
>100_bases GACGGTCAGACCCATCTATAACCGGCCCCACTCCGAATCACTGGTGTCCACCCAGGAGGACGGCGTTCAACGCCGCCGCA GAAGCAAAGGAATCGAAGCG
Downstream 100 bases:
>100_bases CGTTCGGCGCGGTCAAGGCGAGGCAGCCCGTGTAGGCGGTTTGCCTCGCTCATCCGGCGGCTTCGTGCCGATAGATCACG TGATATCCCAAGCGCATGAC
Product: cell surface lipoprotein mpt83 (lipoprotein P23)
Products: NA
Alternate protein names: Lipoprotein p23
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAG MAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA GQASPSRIDGTHQTLQGADLTVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ
Sequences:
>Translated_220_residues MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAG MAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA GQASPSRIDGTHQTLQGADLTVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ >Mature_220_residues MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLIGRGCAQYAAQNPTGPGSVAG MAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIA GQASPSRIDGTHQTLQGADLTVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ
Specific function: Unknown
COG id: COG2335
COG function: function code M; Secreted and surface protein containing fasciclin-like repeats
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAS1 domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MP83_MYCBO (P0CAX7)
Other databases:
- EMBL: D64165 - EMBL: BX248344 - RefSeq: NP_856543.1 - ProteinModelPortal: P0CAX7 - SMR: P0CAX7 - EnsemblBacteria: EBMYCT00000016837 - GeneID: 1092210 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2898 - GeneTree: EBGT00050000018549 - HOGENOM: HBG750250 - OMA: AGMAADP - ProtClustDB: CLSK792135 - InterPro: IPR000782 - Gene3D: G3DSA:2.30.180.10 - SMART: SM00554
Pfam domain/function: PF02469 Fasciclin; SSF82153 BIgH3_FAS1
EC number: NA
Molecular weight: Translated: 22070; Mature: 22070
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50213 FAS1; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLI CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH GRGCAQYAAQNPTGPGSVAGMAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGG HHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC EYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADL CEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCE TVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ EEEECCCCEEEECCCEEECCEEECCEEEEEEEEEECCCCC >Mature Secondary Structure MINVQAKPAAAASLAAIAIAFLAGCSSTKPVSQDTSPKPATSPAAPVTTAAMADPAADLI CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH GRGCAQYAAQNPTGPGSVAGMAQDPVATAASNNPMLSTLTSALSGKLNPDVNLVDTLNGG HHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC EYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRIDGTHQTLQGADL CEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCE TVIGARDDLMVNNAGLVCGGVHTANATVYMIDTVLMPPAQ EEEECCCCEEEECCCEEECCEEECCEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8633205; 12788972