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The map label for this gene is 148824062

Identifier: 148824062

GI number: 148824062

Start: 3194912

End: 3195355

Strand: Direct

Name: 148824062

Synonym: TBFG_12887

Alternate gene names: NA

Gene position: 3194912-3195355 (Clockwise)

Preceding gene: 148824057

Following gene: 148824063

Centisome position: 72.21

GC content: 63.74

Gene sequence:

>444_bases
ATGCTGTGCGTTGATGTCAACGTGCTCGTTTACGCGCATCGGGCAGACCTACGGGAGCACGCGGACTATCGGGGTTTGCT
TGAGCGGCTGGCCAACGATGACGAGCCGCTGGGTCTACCAGATAGCGTGCTCGCCGGCTTCATCCGGGTGGTTACCAACC
GCCGCGTCTTCACCGAGCCGACGAGCCCACAGGACGCATGGCAGGCAGTCGACGCCCTACTCGCGGCACCCGCAGCCATG
CGACTTCGGCCTGGCGAGCGCCACTGGATGGCCTTTCGGCAGTTAGCGTCCGATGTTGATGCGAACGGCAACGACATTGC
GGACGCGCACCTGGCCGCCTACGCGCTAGAGAACAACGCAACCTGGTTGAGCGCCGACCGCGGCTTTGCCCGTTTCCGTC
GACTGCGCTGGCGTCATCCGTTGGACGGTCAGACCCATCTATAA

Upstream 100 bases:

>100_bases
TATCGAGTCCAGCCGTCGGGTAAGGGCGGCCTGCGGCCCGGTGTCGATCTATCGTCCAACGCCGCACTTGCCGAAGCGAT
GAACGACGGCGTGTCGGTCG

Downstream 100 bases:

>100_bases
CCGGCCCCACTCCGAATCACTGGTGTCCACCCAGGAGGACGGCGTTCAACGCCGCCGCAGAAGCAAAGGAATCGAAGCGA
TGATCAACGTTCAGGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPTSPQDAWQAVDALLAAPAAM
RLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNATWLSADRGFARFRRLRWRHPLDGQTHL

Sequences:

>Translated_147_residues
MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPTSPQDAWQAVDALLAAPAAM
RLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNATWLSADRGFARFRRLRWRHPLDGQTHL
>Mature_147_residues
MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPTSPQDAWQAVDALLAAPAAM
RLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNATWLSADRGFARFRRLRWRHPLDGQTHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2872_MYCTU (P65043)

Other databases:

- EMBL:   BX842581
- EMBL:   AE000516
- PIR:   C70923
- RefSeq:   NP_217388.1
- RefSeq:   NP_337450.1
- ProteinModelPortal:   P65043
- EnsemblBacteria:   EBMYCT00000001130
- EnsemblBacteria:   EBMYCT00000070356
- GeneID:   887361
- GeneID:   925337
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2939
- KEGG:   mtu:Rv2872
- TIGR:   MT2939
- TubercuList:   Rv2872
- GeneTree:   EBGT00050000018299
- HOGENOM:   HBG568469
- OMA:   LCADKAL
- ProtClustDB:   CLSK872117
- InterPro:   IPR006226
- InterPro:   IPR002716
- TIGRFAMs:   TIGR00028

Pfam domain/function: PF01850 PIN

EC number: NA

Molecular weight: Translated: 16596; Mature: 16596

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP
CEEEEEHEEEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEECC
TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA
CCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
TWLSADRGFARFRRLRWRHPLDGQTHL
EEEECCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLCVDVNVLVYAHRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEP
CEEEEEHEEEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEECC
TSPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENNA
CCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
TWLSADRGFARFRRLRWRHPLDGQTHL
EEEECCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036