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The map label for this gene is yfhP [C]

Identifier: 148661074

GI number: 148661074

Start: 1442115

End: 1442600

Strand: Direct

Name: yfhP [C]

Synonym: MRA_1295

Alternate gene names: 148661074

Gene position: 1442115-1442600 (Clockwise)

Preceding gene: 148661073

Following gene: 148661075

Centisome position: 32.63

GC content: 67.9

Gene sequence:

>486_bases
ATGCGGATGTCAGCTAAGGCGGAGTACGCGGTGCGGGCGATGGTCCAGCTCGCCACGGCCGCCAGTGGCACCGTGGTCAA
GACCGACGATCTGGCTGCGGCCCAAGGCATACCACCGCAGTTTCTCGTCGATATCCTGACCAACCTGCGCACCGACCGCC
TGGTGCGAAGCCACCGCGGTCGCGAGGGTGGTTATGAATTGGCGCGTCCGGGCACCGAGATCAGCATCGCCGACGTATTG
CGCTGCATCGACGGACCGCTGGCTAGTGTCCGCGATATCGGACTTGGCGACCTGCCCTACTCGGGCCCCACTACCGCGCT
GACCGACGTTTGGCGCGCGCTGCGCGCCAGTATGCGGTCGGTGCTGGAGGAGACCACGCTGGCTGACGTTGCCGGTGGCG
CGCTGCCCGAGCACGTCGCCCAGCTCGCCGACGACTATCGCGCGCAGGAGAGCACGCGGCACGGCGCCTCGCGCCATGGT
GACTAG

Upstream 100 bases:

>100_bases
ACGAGCAGGCGCAGGAGGTTATCGACCTGTTGGAGTCATCGTCTTAGGCCGGCCTGGTTGCTCTGCTGTCCCTGGCAAGC
GGGTGGCACAATCCTGAAGC

Downstream 100 bases:

>100_bases
CCGCCAGAGCCATCGGCAGGGCCTGCCTGAGCCAGGTGCAACCGAAGGAGTCAACGAATGGTCAGCACACATGCGGTTGT
CGCGGGGGAGACGCTGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGREGGYELARPGTEISIADVL
RCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHG
D

Sequences:

>Translated_161_residues
MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGREGGYELARPGTEISIADVL
RCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHG
D
>Mature_161_residues
MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRGREGGYELARPGTEISIADVL
RCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRSVLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHG
D

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): Y1287_MYCTU (P67159)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   C70772
- RefSeq:   NP_215803.1
- RefSeq:   NP_335772.1
- ProteinModelPortal:   P67159
- EnsemblBacteria:   EBMYCT00000001390
- EnsemblBacteria:   EBMYCT00000072382
- GeneID:   886998
- GeneID:   924746
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1325
- KEGG:   mtu:Rv1287
- TIGR:   MT1325
- TubercuList:   Rv1287
- GeneTree:   EBGT00050000018150
- HOGENOM:   HBG725923
- OMA:   QAQGIPP
- ProtClustDB:   CLSK871921
- InterPro:   IPR000944
- TIGRFAMs:   TIGR00738

Pfam domain/function: PF02082 Rrf2

EC number: NA

Molecular weight: Translated: 17210; Mature: 17210

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS01332 HTH_RRF2_1; PS51197 HTH_RRF2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG
CCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS
CCCCCHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRMSAKAEYAVRAMVQLATAASGTVVKTDDLAAAQGIPPQFLVDILTNLRTDRLVRSHRG
CCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
REGGYELARPGTEISIADVLRCIDGPLASVRDIGLGDLPYSGPTTALTDVWRALRASMRS
CCCCCHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VLEETTLADVAGGALPEHVAQLADDYRAQESTRHGASRHGD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036