| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is 148661075
Identifier: 148661075
GI number: 148661075
Start: 1442658
End: 1444028
Strand: Direct
Name: 148661075
Synonym: MRA_1296
Alternate gene names: NA
Gene position: 1442658-1444028 (Clockwise)
Preceding gene: 148661074
Following gene: 148661076
Centisome position: 32.64
GC content: 64.99
Gene sequence:
>1371_bases ATGGTCAGCACACATGCGGTTGTCGCGGGGGAGACGCTGTCGGCGTTGGCGTTGCGCTTCTATGGCGACGCGGAACTGTA TCGGCTGATCGCCGCCGCCAGCGGGATCGCCGATCCCGACGTCGTCAATGTGGGGCAGCGGCTGATTATGCCTGACTTCA CGCGATACACCGTTGTTGCCGGGGACACGCTGTCGGCGTTGGCGTTGCGCTTCTATGGCGACGCGGAATTGAATTGGCTG ATCGCCGCCGCCAGCGGGATCGCCGATCCCGACGTCGTCAATGTGGGGCAGCGGCTGATTATGCCTGACTTCACGCGATA CACCGTTGTTGCCGGGGACACGCTGTCGGCATTGGCTGCGCGCTTCTATGGCGACGCCTCCCTATATCCGCTTATCGCCG CCGTCAATGGCATCGCCGATCCTGGCGTCATCGACGTCGGGCAGGTACTGGTCATATTCATCGGGCGTAGCGACGGGTTC GGCCTAAGGATCGTGGACCGCAACGAGAACGATCCCCGCCTGTGGTACTACCGGTTCCAGACCTCCGCGATCGGCTGGAA CCCCGGAGTCAACGTCCTGCTTCCCGATGACTACCGCACCAGCGGACGCACCTATCCCGTCCTCTACCTGTTCCACGGCG GCGGCACCGACCAGGATTTCCGCACGTTCGACTTTCTGGGCATCCGCGACCTGACCGCCGGAAAGCCGATCATCATCGTG ATGCCCGACGGCGGGCACGCGGGCTGGTATTCCAACCCGGTCAGCTCGTTCGTCGGCCCACGGAACTGGGAGACATTCCA CATCGCCCAGCTGCTCCCCTGGATCGAGGCGAACTTCCGAACCTACGCCGAATACGACGGCCGCGCGGTCGCCGGGTTTT CGATGGGTGGCTTCGGCGCGCTGAAGTACGCAGCAAAGTACTACGGCCACTTCGCGTCGGCGAGCAGCCACTCCGGACCG GCAAGTCTGCGCCGCGACTTCGGCCTGGTAGTGCATTGGGCAAACCTGTCCTCGGCGGTGCTGGATCTAGGCGGCGGCAC GGTTTACGGCGCGCCGCTCTGGGACCAAGCTAGGGTCAGCGCCGACAACCCGGTCGAGCGTATCGACAGCTACCGCAACA AGCGGATCTTCCTGGTCGCCGGCACCAGTCCGGACCCGGCCAACTGGTTCGACAGCGTGAACGAGACCCAGGTGCTAGCC GGGCAGAGGGAGTTCCGCGAACGCCTCAGCAACGCCGGCATCCCGCATGAATCGCACGAGGTGCCTGGCGGTCACGTCTT CCGGCCCGACATGTTCCGTCTCGACCTCGACGGCATCGTCGCCCGGCTGCGCCCCGCGAGCATCGGGGCGGCCGCAGAAC GCGCCGATTAG
Upstream 100 bases:
>100_bases GCAGGAGAGCACGCGGCACGGCGCCTCGCGCCATGGTGACTAGCCGCCAGAGCCATCGGCAGGGCCTGCCTGAGCCAGGT GCAACCGAAGGAGTCAACGA
Downstream 100 bases:
>100_bases CCGCACCACGTATACCCCGCGGGCAGGTGGCCGCTGGCCGATAGCCTCATGTGTGTGAGCGTGGGCGAGTCAGTTGCGCA GTCGCTGCAACAGTGGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MVSTHAVVAGETLSALALRFYGDAELYRLIAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALALRFYGDAELNWL IAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALAARFYGDASLYPLIAAVNGIADPGVIDVGQVLVIFIGRSDGF GLRIVDRNENDPRLWYYRFQTSAIGWNPGVNVLLPDDYRTSGRTYPVLYLFHGGGTDQDFRTFDFLGIRDLTAGKPIIIV MPDGGHAGWYSNPVSSFVGPRNWETFHIAQLLPWIEANFRTYAEYDGRAVAGFSMGGFGALKYAAKYYGHFASASSHSGP ASLRRDFGLVVHWANLSSAVLDLGGGTVYGAPLWDQARVSADNPVERIDSYRNKRIFLVAGTSPDPANWFDSVNETQVLA GQREFRERLSNAGIPHESHEVPGGHVFRPDMFRLDLDGIVARLRPASIGAAAERAD
Sequences:
>Translated_456_residues MVSTHAVVAGETLSALALRFYGDAELYRLIAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALALRFYGDAELNWL IAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALAARFYGDASLYPLIAAVNGIADPGVIDVGQVLVIFIGRSDGF GLRIVDRNENDPRLWYYRFQTSAIGWNPGVNVLLPDDYRTSGRTYPVLYLFHGGGTDQDFRTFDFLGIRDLTAGKPIIIV MPDGGHAGWYSNPVSSFVGPRNWETFHIAQLLPWIEANFRTYAEYDGRAVAGFSMGGFGALKYAAKYYGHFASASSHSGP ASLRRDFGLVVHWANLSSAVLDLGGGTVYGAPLWDQARVSADNPVERIDSYRNKRIFLVAGTSPDPANWFDSVNETQVLA GQREFRERLSNAGIPHESHEVPGGHVFRPDMFRLDLDGIVARLRPASIGAAAERAD >Mature_456_residues MVSTHAVVAGETLSALALRFYGDAELYRLIAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALALRFYGDAELNWL IAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALAARFYGDASLYPLIAAVNGIADPGVIDVGQVLVIFIGRSDGF GLRIVDRNENDPRLWYYRFQTSAIGWNPGVNVLLPDDYRTSGRTYPVLYLFHGGGTDQDFRTFDFLGIRDLTAGKPIIIV MPDGGHAGWYSNPVSSFVGPRNWETFHIAQLLPWIEANFRTYAEYDGRAVAGFSMGGFGALKYAAKYYGHFASASSHSGP ASLRRDFGLVVHWANLSSAVLDLGGGTVYGAPLWDQARVSADNPVERIDSYRNKRIFLVAGTSPDPANWFDSVNETQVLA GQREFRERLSNAGIPHESHEVPGGHVFRPDMFRLDLDGIVARLRPASIGAAAERAD
Specific function: Unknown
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 LysM repeats
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1288_MYCTU (Q10614)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: D70772 - RefSeq: NP_215804.1 - RefSeq: NP_335773.1 - ProteinModelPortal: Q10614 - EnsemblBacteria: EBMYCT00000000390 - EnsemblBacteria: EBMYCT00000069352 - GeneID: 886974 - GeneID: 924744 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1326 - KEGG: mtu:Rv1288 - TIGR: MT1326 - TubercuList: Rv1288 - GeneTree: EBGT00050000015318 - HOGENOM: HBG567438 - OMA: NPVERIE - ProtClustDB: CLSK871922 - InterPro: IPR000801 - InterPro: IPR018392 - InterPro: IPR002482 - InterPro: IPR008861 - SMART: SM00257
Pfam domain/function: PF00756 Esterase; PF01476 LysM; PF05489 Phage_tail_X
EC number: NA
Molecular weight: Translated: 49619; Mature: 49619
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTHAVVAGETLSALALRFYGDAELYRLIAAASGIADPDVVNVGQRLIMPDFTRYTVVA CCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEE GDTLSALALRFYGDAELNWLIAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALAA CCHHHHHHEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCEEEEEECCHHHHHHH RFYGDASLYPLIAAVNGIADPGVIDVGQVLVIFIGRSDGFGLRIVDRNENDPRLWYYRFQ HHCCCCHHHHHHHHHHCCCCCCCEECCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEE TSAIGWNPGVNVLLPDDYRTSGRTYPVLYLFHGGGTDQDFRTFDFLGIRDLTAGKPIIIV ECEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCEECCCCCCEEEE MPDGGHAGWYSNPVSSFVGPRNWETFHIAQLLPWIEANFRTYAEYDGRAVAGFSMGGFGA EECCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHH LKYAAKYYGHFASASSHSGPASLRRDFGLVVHWANLSSAVLDLGGGTVYGAPLWDQARVS HHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEECCCCCHHEECCCCEEECCCCCCCCCCC ADNPVERIDSYRNKRIFLVAGTSPDPANWFDSVNETQVLAGQREFRERLSNAGIPHESHE CCCHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCHHHHHCHHHHHHHHHHCCCCCCCCC VPGGHVFRPDMFRLDLDGIVARLRPASIGAAAERAD CCCCEEECCCEEEEEHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure MVSTHAVVAGETLSALALRFYGDAELYRLIAAASGIADPDVVNVGQRLIMPDFTRYTVVA CCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEE GDTLSALALRFYGDAELNWLIAAASGIADPDVVNVGQRLIMPDFTRYTVVAGDTLSALAA CCHHHHHHEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCEEEEEECCHHHHHHH RFYGDASLYPLIAAVNGIADPGVIDVGQVLVIFIGRSDGFGLRIVDRNENDPRLWYYRFQ HHCCCCHHHHHHHHHHCCCCCCCEECCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEE TSAIGWNPGVNVLLPDDYRTSGRTYPVLYLFHGGGTDQDFRTFDFLGIRDLTAGKPIIIV ECEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCEECCCCCCEEEE MPDGGHAGWYSNPVSSFVGPRNWETFHIAQLLPWIEANFRTYAEYDGRAVAGFSMGGFGA EECCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHH LKYAAKYYGHFASASSHSGPASLRRDFGLVVHWANLSSAVLDLGGGTVYGAPLWDQARVS HHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEECCCCCHHEECCCCEEECCCCCCCCCCC ADNPVERIDSYRNKRIFLVAGTSPDPANWFDSVNETQVLAGQREFRERLSNAGIPHESHE CCCHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCHHHHHCHHHHHHHHHHCCCCCCCCC VPGGHVFRPDMFRLDLDGIVARLRPASIGAAAERAD CCCCEEECCCEEEEEHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036