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The map label for this gene is ydaC [H]

Identifier: 148660095

GI number: 148660095

Start: 396056

End: 396682

Strand: Reverse

Name: ydaC [H]

Synonym: MRA_0338

Alternate gene names: 148660095

Gene position: 396682-396056 (Counterclockwise)

Preceding gene: 148660096

Following gene: 148660093

Centisome position: 8.97

GC content: 66.83

Gene sequence:

>627_bases
ATGCGCCTCACACATCCGGCCCGACGGTACCTATCCAGTCAGGCTGCCCGGCCAACAGGCGCGTTCGGCCGCCTACTGGG
ACGGATCTGGCGAGCCGAGACCGCCGACGTCAATCGCATCGCCGTCGAGCTGCTCGCGCCCGGCCCGGGCGAGCGGGTTT
GCGAGATCGGCTTTGGCCCCGGCCGAACCCTTGGGCTGCTCGCCGCCGCCGGCGCGCAAGTGAGCGGCGTCGAGGTGTCG
ACGACCATGATCGCAATCGCGGCCCATCACAACGCGAAAGCCATTGCAGCCGGCCTGATCTCGCTTTATCACGGCGATGG
AGTAACCCTGCCGGTTGCCGACCACAGCCTTGACAAGGTGCTCGGCGTGCACAACTTTTACTTCTGGCCCGATCCCCGCG
CCAGCCTTTGCGACATCGCTCGAGCCCTGCGGCCCGGGGGTCGACTCGTCCTTACATCGATATCCGATGACCAACCACTG
GCGGCCCGTTTCGATCCCGCGATCTATCGCGTGCCCCCCACCCTCGACACCGCCGCGTGGCTTGGCGCTGCCGGCTTCAT
CGACGTCGGCATCAAGCGCAGTGCAGACCATCCGGCGACCGTGTGGTTCACCGCAACTGCGACGTGA

Upstream 100 bases:

>100_bases
TGATCGATGACGATGCGATCGCTGCGACCCTCGCCGAGTTTGTCGTTCGGGCCACCACAGCTTCTTCGGACTAACCGCTT
GCAACCGAAAGGTCGTCCCC

Downstream 100 bases:

>100_bases
CGACCGCGCCGATGCTGGCAAGCGCTCGGATTACCTCGGTCGATCGCGGGGTGGCGGACGGATCGGCGATCCACTGGATC
ATGAGGCCATCGATGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MRLTHPARRYLSSQAARPTGAFGRLLGRIWRAETADVNRIAVELLAPGPGERVCEIGFGPGRTLGLLAAAGAQVSGVEVS
TTMIAIAAHHNAKAIAAGLISLYHGDGVTLPVADHSLDKVLGVHNFYFWPDPRASLCDIARALRPGGRLVLTSISDDQPL
AARFDPAIYRVPPTLDTAAWLGAAGFIDVGIKRSADHPATVWFTATAT

Sequences:

>Translated_208_residues
MRLTHPARRYLSSQAARPTGAFGRLLGRIWRAETADVNRIAVELLAPGPGERVCEIGFGPGRTLGLLAAAGAQVSGVEVS
TTMIAIAAHHNAKAIAAGLISLYHGDGVTLPVADHSLDKVLGVHNFYFWPDPRASLCDIARALRPGGRLVLTSISDDQPL
AARFDPAIYRVPPTLDTAAWLGAAGFIDVGIKRSADHPATVWFTATAT
>Mature_208_residues
MRLTHPARRYLSSQAARPTGAFGRLLGRIWRAETADVNRIAVELLAPGPGERVCEIGFGPGRTLGLLAAAGAQVSGVEVS
TTMIAIAAHHNAKAIAAGLISLYHGDGVTLPVADHSLDKVLGVHNFYFWPDPRASLCDIARALRPGGRLVLTSISDDQPL
AARFDPAIYRVPPTLDTAAWLGAAGFIDVGIKRSADHPATVWFTATAT

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 21993; Mature: 21993

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTHPARRYLSSQAARPTGAFGRLLGRIWRAETADVNRIAVELLAPGPGERVCEIGFGP
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCC
GRTLGLLAAAGAQVSGVEVSTTMIAIAAHHNAKAIAAGLISLYHGDGVTLPVADHSLDKV
CCHHHHHHHCCCCCCCEEEEHEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCHHHH
LGVHNFYFWPDPRASLCDIARALRPGGRLVLTSISDDQPLAARFDPAIYRVPPTLDTAAW
HHHCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHH
LGAAGFIDVGIKRSADHPATVWFTATAT
HCCCCEEEECCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRLTHPARRYLSSQAARPTGAFGRLLGRIWRAETADVNRIAVELLAPGPGERVCEIGFGP
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCC
GRTLGLLAAAGAQVSGVEVSTTMIAIAAHHNAKAIAAGLISLYHGDGVTLPVADHSLDKV
CCHHHHHHHCCCCCCCEEEEHEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCHHHH
LGVHNFYFWPDPRASLCDIARALRPGGRLVLTSISDDQPLAARFDPAIYRVPPTLDTAAW
HHHCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHH
LGAAGFIDVGIKRSADHPATVWFTATAT
HCCCCEEEECCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]